RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 LINC00482Q8N8I6 264 aa16.58■□□□□ 0.25
CTDSPL-206ENST00000443503 WFDC10AQ9H1F0 79 aa16.58■□□□□ 0.24
CTDSPL-206ENST00000443503 RPL18AQ02543 176 aaKnown RBP16.57■□□□□ 0.24
CTDSPL-206ENST00000443503 NDUFA1O15239 70 aa16.57■□□□□ 0.24
CTDSPL-206ENST00000443503 CRYGDP07320 174 aa16.57■□□□□ 0.24
CTDSPL-206ENST00000443503 POLR2KP53803 58 aaKnown RBP16.57■□□□□ 0.24
CTDSPL-206ENST00000443503 DEFB105AQ8NG35 78 aa16.57■□□□□ 0.24
CTDSPL-206ENST00000443503 TET2Q6N021 2002 aaPredicted RBP16.56■□□□□ 0.24
CTDSPL-206ENST00000443503 TRBV10-2A0A0K0K1G8 114 aa16.56■□□□□ 0.24
CTDSPL-206ENST00000443503 TCL1BO95988 128 aa16.56■□□□□ 0.24
CTDSPL-206ENST00000443503 TMEM223A0PJW6 202 aa16.55■□□□□ 0.24
CTDSPL-206ENST00000443503 C2orf91Q6ZV80 131 aa16.55■□□□□ 0.24
CTDSPL-206ENST00000443503 CDK2AP2O75956 126 aa16.54■□□□□ 0.24
CTDSPL-206ENST00000443503 CXCL5P42830 114 aa16.54■□□□□ 0.24
CTDSPL-206ENST00000443503 MRGPRG-AS1Q2M3A8 158 aa16.54■□□□□ 0.24
CTDSPL-206ENST00000443503 LINC00269Q8N2A0 174 aa16.54■□□□□ 0.24
CTDSPL-206ENST00000443503 Q8N976 141 aa16.54■□□□□ 0.24
CTDSPL-206ENST00000443503 UBE2BP63146 152 aa16.54■□□□□ 0.24
CTDSPL-206ENST00000443503 NCR3O14931 201 aa16.53■□□□□ 0.24
CTDSPL-206ENST00000443503 C9orf85Q96MD7 179 aa16.53■□□□□ 0.24
CTDSPL-206ENST00000443503 H3BT86 120 aa16.53■□□□□ 0.24
CTDSPL-206ENST00000443503 TSHBP01222 138 aa16.53■□□□□ 0.24
CTDSPL-206ENST00000443503 COL4A2P08572 1712 aa16.53■□□□□ 0.24
CTDSPL-206ENST00000443503 ADAMTS20P59510 1910 aa16.52■□□□□ 0.24
CTDSPL-206ENST00000443503 ACYP1P07311 99 aa16.51■□□□□ 0.23
CTDSPL-206ENST00000443503 FLNBO75369 2602 aaKnown RBP16.5■□□□□ 0.23
CTDSPL-206ENST00000443503 ETDCA0A1B0GVM5 59 aa16.5■□□□□ 0.23
CTDSPL-206ENST00000443503 SMIM9A6NGZ8 99 aa16.5■□□□□ 0.23
CTDSPL-206ENST00000443503 A8MZ25 164 aa16.5■□□□□ 0.23
CTDSPL-206ENST00000443503 A0A0B4J2C4 111 aa16.5■□□□□ 0.23
CTDSPL-206ENST00000443503 G3V4G9 280 aa16.49■□□□□ 0.23
CTDSPL-206ENST00000443503 CRIP2P52943 208 aaPredicted RBP16.49■□□□□ 0.23
CTDSPL-206ENST00000443503 CHD9Q3L8U1 2897 aa16.49■□□□□ 0.23
CTDSPL-206ENST00000443503 MKI67P46013 3256 aaKnown RBP16.48■□□□□ 0.23
CTDSPL-206ENST00000443503 REG3AQ06141 175 aa16.48■□□□□ 0.23
CTDSPL-206ENST00000443503 PYGO1Q9Y3Y4 419 aa16.48■□□□□ 0.23
CTDSPL-206ENST00000443503 TRBV6-4A0A1B0GX49 114 aa16.48■□□□□ 0.23
CTDSPL-206ENST00000443503 LYRM9A8MSI8 78 aa16.48■□□□□ 0.23
CTDSPL-206ENST00000443503 TRBV6-8A0A0A6YYG3 113 aa16.48■□□□□ 0.23
CTDSPL-206ENST00000443503 SPANXCQ9NY87 97 aa16.48■□□□□ 0.23
CTDSPL-206ENST00000443503 LY6G6DO95868 133 aa16.47■□□□□ 0.23
CTDSPL-206ENST00000443503 LAMA3Q16787 3333 aa16.47■□□□□ 0.23
CTDSPL-206ENST00000443503 RBMY1FQ15415 496 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-206ENST00000443503 SPANXB1Q9NS25 103 aaPredicted RBP16.45■□□□□ 0.22
CTDSPL-206ENST00000443503 IGKV3D-7A0A0C4DH55 119 aa16.44■□□□□ 0.22
CTDSPL-206ENST00000443503 TIRAPP58753 221 aa16.44■□□□□ 0.22
CTDSPL-206ENST00000443503 HILS1P60008 231 aa16.44■□□□□ 0.22
CTDSPL-206ENST00000443503 HIGD2BQ4VC39 106 aa16.44■□□□□ 0.22
CTDSPL-206ENST00000443503 PIK3CD-AS1Q5SR53 167 aa16.44■□□□□ 0.22
CTDSPL-206ENST00000443503 CHCHD10Q8WYQ3 142 aaPredicted RBP16.44■□□□□ 0.22
CTDSPL-206ENST00000443503 ODF3L2Q3SX64 289 aa16.44■□□□□ 0.22
CTDSPL-206ENST00000443503 LINC00308Q8TCZ7 52 aa16.43■□□□□ 0.22
CTDSPL-206ENST00000443503 SPANXDQ9BXN6 97 aa16.42■□□□□ 0.22
CTDSPL-206ENST00000443503 LOC100131303A0A0U1RQF7 123 aa16.42■□□□□ 0.22
CTDSPL-206ENST00000443503 BBC3Q96PG8 261 aaPredicted RBP16.42■□□□□ 0.22
CTDSPL-206ENST00000443503 C11orf45Q8TAV5 145 aa16.42■□□□□ 0.22
CTDSPL-206ENST00000443503 hADV29S1A0JD25 119 aa16.41■□□□□ 0.22
CTDSPL-206ENST00000443503 COX8CQ7Z4L0 72 aa16.41■□□□□ 0.22
CTDSPL-206ENST00000443503 FAM110AQ9BQ89 295 aa16.41■□□□□ 0.22
CTDSPL-206ENST00000443503 B5MCH6 92 aa16.41■□□□□ 0.22
CTDSPL-206ENST00000443503 AGRNO00468 2067 aa16.4■□□□□ 0.22
CTDSPL-206ENST00000443503 H7C423 109 aa16.39■□□□□ 0.22
CTDSPL-206ENST00000443503 RBX1P62877 108 aa16.39■□□□□ 0.22
CTDSPL-206ENST00000443503 TRACP01848 142 aa16.39■□□□□ 0.21
CTDSPL-206ENST00000443503 DIRC1Q969H9 104 aa16.39■□□□□ 0.21
CTDSPL-206ENST00000443503 IGIPA6NJ69 53 aa16.38■□□□□ 0.21
CTDSPL-206ENST00000443503 UBE2D4Q9Y2X8 147 aa16.38■□□□□ 0.21
CTDSPL-206ENST00000443503 BRCA2P51587 3418 aa16.38■□□□□ 0.21
CTDSPL-206ENST00000443503 SMR3AQ99954 134 aa16.38■□□□□ 0.21
CTDSPL-206ENST00000443503 TRIAP1O43715 76 aa16.38■□□□□ 0.21
CTDSPL-206ENST00000443503 A0A096LNJ9 63 aa16.37■□□□□ 0.21
CTDSPL-206ENST00000443503 JMJD7-PLA2G4BH0Y9G9 81 aa16.37■□□□□ 0.21
CTDSPL-206ENST00000443503 MIFP14174 115 aa16.36■□□□□ 0.21
CTDSPL-206ENST00000443503 FUSP35637 526 aaKnown RBP eCLIP16.36■□□□□ 0.21
CTDSPL-206ENST00000443503 TEX49A0A1B0GTD5 131 aa16.36■□□□□ 0.21
CTDSPL-206ENST00000443503 FAM236AA0A1B0GUQ0 79 aa16.36■□□□□ 0.21
CTDSPL-206ENST00000443503 FAM236BA0A1B0GV22 79 aa16.36■□□□□ 0.21
CTDSPL-206ENST00000443503 IGHV4-28A0A0C4DH34 117 aa16.35■□□□□ 0.21
CTDSPL-206ENST00000443503 UFSP1Q6NVU6 142 aa16.35■□□□□ 0.21
CTDSPL-206ENST00000443503 IBA57-AS1B1ANH7 110 aa16.35■□□□□ 0.21
CTDSPL-206ENST00000443503 BRI3O95415 125 aa16.34■□□□□ 0.21
CTDSPL-206ENST00000443503 C14orf132Q9NPU4 83 aa16.34■□□□□ 0.21
CTDSPL-206ENST00000443503 DEFB131BA0A096LNP1 70 aa16.34■□□□□ 0.21
CTDSPL-206ENST00000443503 CITED1Q99966 193 aa16.33■□□□□ 0.21
CTDSPL-206ENST00000443503 RBM3P98179 157 aaKnown RBP16.32■□□□□ 0.2
CTDSPL-206ENST00000443503 PLA2G2AP14555 144 aa16.31■□□□□ 0.2
CTDSPL-206ENST00000443503 XAGE1AQ9HD64 81 aa16.31■□□□□ 0.2
CTDSPL-206ENST00000443503 TMEM256-PLSCR3K7ERE1 68 aa16.31■□□□□ 0.2
CTDSPL-206ENST00000443503 TRBV30A0A0K0K1B3 111 aa16.29■□□□□ 0.2
CTDSPL-206ENST00000443503 UBE2D1P51668 147 aa16.29■□□□□ 0.2
CTDSPL-206ENST00000443503 MRPS36P82909 103 aaKnown RBP16.29■□□□□ 0.2
CTDSPL-206ENST00000443503 UBE2D3P61077 147 aa16.28■□□□□ 0.2
CTDSPL-206ENST00000443503 UBE2D2P62837 147 aa16.28■□□□□ 0.2
CTDSPL-206ENST00000443503 A0A1B0GX51 115 aa16.28■□□□□ 0.2
CTDSPL-206ENST00000443503 ZNF580Q9UK33 172 aa16.28■□□□□ 0.2
CTDSPL-206ENST00000443503 LINC00526Q96FQ7 95 aa16.27■□□□□ 0.2
CTDSPL-206ENST00000443503 COX7BP24311 80 aa16.27■□□□□ 0.19
CTDSPL-206ENST00000443503 NREPQ16612 68 aa16.27■□□□□ 0.19
CTDSPL-206ENST00000443503 NDUFA7O95182 113 aa16.26■□□□□ 0.19
CTDSPL-206ENST00000443503 POM121L12Q8N7R1 296 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms