RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 EFCAB5A4FU69 1503 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 HMGXB3Q12766 1538 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 NEXMIFQ5QGS0 1516 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 COL4A6Q14031 1691 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 MYO5CQ9NQX4 1742 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 IGKV2-40A0A087WW87 121 aaPredicted RBP2.32□□□□□ -2.04
VPS50-206ENST00000443443 IGKV3D-7A0A0C4DH55 119 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 IGKV3OR2-268A0A0C4DH90 116 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 A0A1B0GWA3 101 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 FAM223BA6NKX1 122 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 CEBPZOSA8MTT3 80 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 F8VRH5 84 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 INE1O15225 51 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 LEPROTL1O95214 131 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 IGKV2D-40P01614 121 aaPredicted RBP2.32□□□□□ -2.04
VPS50-206ENST00000443443 IL9P15248 144 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 DEFB132Q7Z7B7 95 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 PSENENQ9NZ42 101 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 LTBP2Q14767 1821 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 CASP8AP2Q9UKL3 1982 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 MRC1P22897 1456 aa2.32□□□□□ -2.04
VPS50-206ENST00000443443 NRXN2Q9P2S2 1712 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 DOCK2Q92608 1830 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 MYH4Q9Y623 1939 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 MICAL3Q7RTP6 2002 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 ARMS2P0C7Q2 107 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 GNGT1P63211 74 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 FXYD3Q14802 87 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 C6orf201Q7Z4U5 140 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 SNURFQ9Y675 71 aa2.31□□□□□ -2.04
VPS50-206ENST00000443443 NINQ8N4C6 2090 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 MED12LQ86YW9 2145 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 IGKV2-29A2NJV5 120 aaPredicted RBP2.3□□□□□ -2.04
VPS50-206ENST00000443443 D6R8Y8 96 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 M0R2N4 97 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 CCL18P55774 89 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 DEFB121Q5J5C9 76 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 HCP5Q6MZN7 132 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 MUSTN1Q8IVN3 82 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 PRR15LQ9BU68 103 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 MYOM1P52179 1685 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 CTTNBP2Q8WZ74 1663 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 MYOFQ9NZM1 2061 aa2.3□□□□□ -2.04
VPS50-206ENST00000443443 GPR179Q6PRD1 2367 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 TMEM131LA2VDJ0 1609 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 MADDQ8WXG6 1647 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 LOC110117498A0A087WWA1 95 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 NBDYA0A0U1RRE5 68 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 BAGE2Q86Y30 109 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 RP1P56715 2156 aa2.29□□□□□ -2.04
VPS50-206ENST00000443443 SIP14410 1827 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 ABCA10Q8WWZ4 1543 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 CTXND1A0A1B0GTU2 59 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 C10orf142B7Z368 130 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 M0R135 149 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 FXYD1O00168 92 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 UQCR11O14957 56 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 SPINT3P49223 89 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 FXYD4P59646 89 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 BAGE3Q86Y29 109 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 C5orf56Q8N8D9 126 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 ZNF563Q8TA94 476 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 HEATR1Q9H583 2144 aaKnown RBP2.28□□□□□ -2.04
VPS50-206ENST00000443443 LINC01558Q9Y6Z2 57 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 STRCP1A6NGW2 1772 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 DLEC1Q9Y238 1755 aa2.28□□□□□ -2.04
VPS50-206ENST00000443443 KNDC1Q76NI1 1749 aa2.28□□□□□ -2.05
VPS50-206ENST00000443443 UBR1Q8IWV7 1749 aa2.28□□□□□ -2.05
VPS50-206ENST00000443443 SFTA3P0C7M3 94 aa2.27□□□□□ -2.05
VPS50-206ENST00000443443 ZNF625Q96I27 306 aaPredicted RBP2.27□□□□□ -2.05
VPS50-206ENST00000443443 MED13Q9UHV7 2174 aa2.27□□□□□ -2.05
VPS50-206ENST00000443443 RREB1Q92766 1687 aa2.27□□□□□ -2.05
VPS50-206ENST00000443443 ZGRF1Q86YA3 2104 aa2.27□□□□□ -2.05
VPS50-206ENST00000443443 CEP192Q8TEP8 1941 aa2.27□□□□□ -2.05
VPS50-206ENST00000443443 RGPD8O14715 1765 aaPredicted RBP2.26□□□□□ -2.05
VPS50-206ENST00000443443 RGPD5Q99666 1765 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 A0A087WXM4 84 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 M0R3E3 92 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 IGKV4-1P06312 121 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 MGPP08493 103 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 GCHFRP30047 84 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 ATP5EP2Q5VTU8 51 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 Q6JHZ5 121 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 ZFHX2Q9C0A1 2572 aaPredicted RBP2.26□□□□□ -2.05
VPS50-206ENST00000443443 NUMA1Q14980 2115 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 MPDZO75970 2070 aa2.26□□□□□ -2.05
VPS50-206ENST00000443443 ARHGEF5Q12774 1597 aa2.25□□□□□ -2.05
VPS50-206ENST00000443443 TRGV2A0A075B6R0 118 aa2.25□□□□□ -2.05
VPS50-206ENST00000443443 COX8AP10176 69 aa2.25□□□□□ -2.05
VPS50-206ENST00000443443 GDF5OSQ5U4N7 250 aa2.25□□□□□ -2.05
VPS50-206ENST00000443443 SMIM5Q71RC9 77 aa2.25□□□□□ -2.05
VPS50-206ENST00000443443 LINC00208Q96KT6 92 aa2.25□□□□□ -2.05
VPS50-206ENST00000443443 WFDC6Q9BQY6 131 aa2.25□□□□□ -2.05
VPS50-206ENST00000443443 AFDNP55196 1824 aaKnown RBP2.24□□□□□ -2.05
VPS50-206ENST00000443443 RGPD2P0DJD1 1756 aa2.24□□□□□ -2.05
VPS50-206ENST00000443443 EXPH5Q8NEV8 1989 aa2.24□□□□□ -2.05
VPS50-206ENST00000443443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.24□□□□□ -2.05
VPS50-206ENST00000443443 A0A087WTM6 91 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms