RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 FAM104AQ969W3 186 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 RNF183Q96D59 192 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 H3BRM9 83 aa9.3□□□□□ -0.92
CPSF4-206ENST00000441580 J3QQQ9 107 aa9.3□□□□□ -0.92
CPSF4-206ENST00000441580 GCSHP23434 173 aa9.3□□□□□ -0.92
CPSF4-206ENST00000441580 UBE2D1P51668 147 aa9.3□□□□□ -0.92
CPSF4-206ENST00000441580 CEMP1Q6PRD7 247 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-206ENST00000441580 SCGB1D4Q6XE38 83 aa9.3□□□□□ -0.92
CPSF4-206ENST00000441580 NTM-AS1Q6ZSK4 140 aa9.3□□□□□ -0.92
CPSF4-206ENST00000441580 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
CPSF4-206ENST00000441580 PRO0255Q9UI72 69 aa9.3□□□□□ -0.92
CPSF4-206ENST00000441580 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 LOC100131303A0A0U1RQF7 123 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 TAX1BP3O14907 124 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 TIRAPP58753 221 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 DAD1P61803 113 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 HERVK_113P63121 156 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 CEND1Q8N111 149 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 TM2D2Q9BX73 214 aa9.29□□□□□ -0.92
CPSF4-206ENST00000441580 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
CPSF4-206ENST00000441580 HIST1H4GQ99525 98 aa9.28□□□□□ -0.92
CPSF4-206ENST00000441580 TRBV6-8A0A0A6YYG3 113 aa9.27□□□□□ -0.93
CPSF4-206ENST00000441580 TMEM238LA0A1B0GVL6 79 aa9.27□□□□□ -0.93
CPSF4-206ENST00000441580 A6NJY4 79 aa9.27□□□□□ -0.93
CPSF4-206ENST00000441580 SPART-AS1P0CW21 52 aa9.27□□□□□ -0.93
CPSF4-206ENST00000441580 GYPEP15421 78 aa9.27□□□□□ -0.93
CPSF4-206ENST00000441580 TSPEAR-AS2P59090 65 aa9.27□□□□□ -0.93
CPSF4-206ENST00000441580 RNASE13Q5GAN3 156 aaKnown RBP9.27□□□□□ -0.93
CPSF4-206ENST00000441580 PRIMA1Q86XR5 153 aa9.27□□□□□ -0.93
CPSF4-206ENST00000441580 SPANXB1Q9NS25 103 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-206ENST00000441580 IGHV1-58A0A0C4DH39 117 aa9.26□□□□□ -0.93
CPSF4-206ENST00000441580 ATP5G1P05496 136 aa9.26□□□□□ -0.93
CPSF4-206ENST00000441580 PTTG1IPP53801 180 aa9.26□□□□□ -0.93
CPSF4-206ENST00000441580 FXYD2P54710 66 aa9.26□□□□□ -0.93
CPSF4-206ENST00000441580 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
CPSF4-206ENST00000441580 ATP6V0E2Q8NHE4 81 aa9.26□□□□□ -0.93
CPSF4-206ENST00000441580 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
CPSF4-206ENST00000441580 PAX4O43316 350 aa9.25□□□□□ -0.93
CPSF4-206ENST00000441580 CDC42SE2Q9NRR3 84 aa9.25□□□□□ -0.93
CPSF4-206ENST00000441580 A0A0J9YY99 117 aa9.24□□□□□ -0.93
CPSF4-206ENST00000441580 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
CPSF4-206ENST00000441580 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
CPSF4-206ENST00000441580 KRTAP10-11P60412 298 aa9.24□□□□□ -0.93
CPSF4-206ENST00000441580 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
CPSF4-206ENST00000441580 VSIG2Q96IQ7 327 aa9.24□□□□□ -0.93
CPSF4-206ENST00000441580 CHCHD5Q9BSY4 110 aa9.24□□□□□ -0.93
CPSF4-206ENST00000441580 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
CPSF4-206ENST00000441580 C11orf68Q9H3H3 251 aaKnown RBP9.23□□□□□ -0.93
CPSF4-206ENST00000441580 TEP1Q99973 2627 aaKnown RBP9.23□□□□□ -0.93
CPSF4-206ENST00000441580 NOTCH3Q9UM47 2321 aa9.22□□□□□ -0.93
CPSF4-206ENST00000441580 IGHV3-64A0A075B6Q5 118 aa9.22□□□□□ -0.93
CPSF4-206ENST00000441580 C9orf118A6NHY6 69 aa9.22□□□□□ -0.93
CPSF4-206ENST00000441580 GAGE6Q13070 117 aa9.22□□□□□ -0.93
CPSF4-206ENST00000441580 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPSF4-206ENST00000441580 LINC00242Q5T6M2 205 aa9.22□□□□□ -0.93
CPSF4-206ENST00000441580 NHP2Q9NX24 153 aaKnown RBP9.22□□□□□ -0.93
CPSF4-206ENST00000441580 CELA1Q9UNI1 258 aa9.22□□□□□ -0.93
CPSF4-206ENST00000441580 A0A1B0GWB2 263 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 CYSRT1A8MQ03 144 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 DEFB4AO15263 64 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 SPINK8P0C7L1 97 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 VAMP3Q15836 100 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 ZFAND6Q6FIF0 208 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 ATRQ13535 2644 aa9.21□□□□□ -0.94
CPSF4-206ENST00000441580 TRAV13-1A0A0B4J241 112 aa9.2□□□□□ -0.94
CPSF4-206ENST00000441580 IGLV5-39A0A0G2JS06 123 aa9.2□□□□□ -0.94
CPSF4-206ENST00000441580 SAMD5Q5TGI4 173 aa9.2□□□□□ -0.94
CPSF4-206ENST00000441580 NDUFA12Q9UI09 145 aa9.2□□□□□ -0.94
CPSF4-206ENST00000441580 TRAV8-3A0A0A6YYJ7 113 aa9.19□□□□□ -0.94
CPSF4-206ENST00000441580 MRPL23Q16540 153 aaKnown RBP9.19□□□□□ -0.94
CPSF4-206ENST00000441580 Q6ZVH6 145 aa9.19□□□□□ -0.94
CPSF4-206ENST00000441580 ICOSQ9Y6W8 199 aa9.19□□□□□ -0.94
CPSF4-206ENST00000441580 FLNBO75369 2602 aaKnown RBP9.19□□□□□ -0.94
CPSF4-206ENST00000441580 A0A0J9YXY3 114 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 SMIM1B2RUZ4 78 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 F5H768 121 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 NDUFA1O15239 70 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 TIMM17BO60830 172 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 UBE2V1Q13404 147 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 C10orf126Q8N4M7 172 aa9.18□□□□□ -0.94
CPSF4-206ENST00000441580 K7EP13 123 aa9.17□□□□□ -0.94
CPSF4-206ENST00000441580 K7ERJ3 54 aa9.17□□□□□ -0.94
CPSF4-206ENST00000441580 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
CPSF4-206ENST00000441580 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
CPSF4-206ENST00000441580 C12orf74Q32Q52 190 aa9.17□□□□□ -0.94
CPSF4-206ENST00000441580 GTF2H5Q6ZYL4 71 aa9.17□□□□□ -0.94
CPSF4-206ENST00000441580 BAHCC1Q9P281 2608 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 G3V4G9 280 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 H3BNG1 76 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 H3BUT2 72 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 CCL25O15444 150 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 RPL24P83731 157 aaKnown RBP9.16□□□□□ -0.94
CPSF4-206ENST00000441580 RAB37Q96AX2 223 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 SPANXDQ9BXN6 97 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 SPANXCQ9NY87 97 aa9.16□□□□□ -0.94
CPSF4-206ENST00000441580 TENM1Q9UKZ4 2725 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms