RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TEX49A0A1B0GTD5 131 aa11.08□□□□□ -0.64
APP-208ENST00000439274 COX6A2Q02221 97 aa11.08□□□□□ -0.64
APP-208ENST00000439274 PIK3CD-AS1Q5SR53 167 aa11.08□□□□□ -0.64
APP-208ENST00000439274 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
APP-208ENST00000439274 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
APP-208ENST00000439274 BEAN1Q3B7T3 259 aa11.08□□□□□ -0.64
APP-208ENST00000439274 C4orf3Q8WVX3 66 aa11.08□□□□□ -0.64
APP-208ENST00000439274 M0QXV9 152 aa11.07□□□□□ -0.64
APP-208ENST00000439274 RS1O15537 224 aa11.07□□□□□ -0.64
APP-208ENST00000439274 CLEC2BQ92478 149 aa11.07□□□□□ -0.64
APP-208ENST00000439274 NDUFA7O95182 113 aa11.07□□□□□ -0.64
APP-208ENST00000439274 TMEM101Q96IK0 257 aa11.07□□□□□ -0.64
APP-208ENST00000439274 DGAT2L7PQ6IED9 249 aa11.06□□□□□ -0.64
APP-208ENST00000439274 Q8N2B8 174 aa11.06□□□□□ -0.64
APP-208ENST00000439274 C11orf44Q8N8P7 122 aa11.06□□□□□ -0.64
APP-208ENST00000439274 DNAJC30Q96LL9 226 aa11.06□□□□□ -0.64
APP-208ENST00000439274 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
APP-208ENST00000439274 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
APP-208ENST00000439274 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
APP-208ENST00000439274 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
APP-208ENST00000439274 NF1P21359 2839 aa11.06□□□□□ -0.64
APP-208ENST00000439274 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
APP-208ENST00000439274 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
APP-208ENST00000439274 J3QKU1 62 aa11.05□□□□□ -0.64
APP-208ENST00000439274 ODF3L2Q3SX64 289 aa11.05□□□□□ -0.64
APP-208ENST00000439274 KRTAP1-3Q8IUG1 177 aa11.05□□□□□ -0.64
APP-208ENST00000439274 ZNF625Q96I27 306 aaPredicted RBP11.05□□□□□ -0.64
APP-208ENST00000439274 NIPBLQ6KC79 2804 aaeCLIP11.05□□□□□ -0.64
APP-208ENST00000439274 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
APP-208ENST00000439274 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
APP-208ENST00000439274 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
APP-208ENST00000439274 H7C423 109 aa11.04□□□□□ -0.64
APP-208ENST00000439274 C1orf158Q8N1D5 194 aa11.04□□□□□ -0.64
APP-208ENST00000439274 TRAV26-1A0A087WT03 109 aa11.03□□□□□ -0.64
APP-208ENST00000439274 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
APP-208ENST00000439274 C2orf82Q6UX34 121 aa11.03□□□□□ -0.64
APP-208ENST00000439274 C2CD3Q4AC94 2353 aa11.03□□□□□ -0.64
APP-208ENST00000439274 APCP25054 2843 aa11.03□□□□□ -0.64
APP-208ENST00000439274 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
APP-208ENST00000439274 NDUFA1O15239 70 aa11.03□□□□□ -0.64
APP-208ENST00000439274 TIRAPP58753 221 aa11.03□□□□□ -0.64
APP-208ENST00000439274 LINC00242Q5T6M2 205 aa11.03□□□□□ -0.64
APP-208ENST00000439274 Q9H8V8 135 aa11.02□□□□□ -0.64
APP-208ENST00000439274 YAE1D1Q9NRH1 226 aa11.02□□□□□ -0.64
APP-208ENST00000439274 CRLF1O75462 422 aa11.02□□□□□ -0.65
APP-208ENST00000439274 UBE2WQ96B02 151 aa11.02□□□□□ -0.65
APP-208ENST00000439274 SETD2Q9BYW2 2564 aaPredicted RBP11.01□□□□□ -0.65
APP-208ENST00000439274 TRAV13-1A0A0B4J241 112 aa11.01□□□□□ -0.65
APP-208ENST00000439274 COX6CP09669 75 aa11.01□□□□□ -0.65
APP-208ENST00000439274 Q6ZTI0 123 aa11.01□□□□□ -0.65
APP-208ENST00000439274 STHQ8IWL8 128 aa11.01□□□□□ -0.65
APP-208ENST00000439274 LRRC75A-AS1Q8N1F1 130 aa11.01□□□□□ -0.65
APP-208ENST00000439274 Q96MF0 132 aa11.01□□□□□ -0.65
APP-208ENST00000439274 TIMM17BO60830 172 aa11.01□□□□□ -0.65
APP-208ENST00000439274 NTM-AS1Q6ZSK4 140 aa11.01□□□□□ -0.65
APP-208ENST00000439274 CITED1Q99966 193 aa11.01□□□□□ -0.65
APP-208ENST00000439274 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
APP-208ENST00000439274 RNF183Q96D59 192 aa11□□□□□ -0.65
APP-208ENST00000439274 JMJD1CQ15652 2540 aa11□□□□□ -0.65
APP-208ENST00000439274 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
APP-208ENST00000439274 LINC01600Q96MT4 127 aa11□□□□□ -0.65
APP-208ENST00000439274 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
APP-208ENST00000439274 LST1O00453 97 aa10.99□□□□□ -0.65
APP-208ENST00000439274 IFITM1P13164 125 aa10.99□□□□□ -0.65
APP-208ENST00000439274 LINC00308Q8TCZ7 52 aa10.99□□□□□ -0.65
APP-208ENST00000439274 IGLV5-39A0A0G2JS06 123 aa10.99□□□□□ -0.65
APP-208ENST00000439274 HERVK_113P63121 156 aa10.99□□□□□ -0.65
APP-208ENST00000439274 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
APP-208ENST00000439274 IL17DQ8TAD2 202 aa10.99□□□□□ -0.65
APP-208ENST00000439274 GAGE12JA6NER3 117 aa10.98□□□□□ -0.65
APP-208ENST00000439274 GAGE4Q13068 117 aa10.98□□□□□ -0.65
APP-208ENST00000439274 GAGE5Q13069 117 aa10.98□□□□□ -0.65
APP-208ENST00000439274 SETXQ7Z333 2677 aaKnown RBP10.98□□□□□ -0.65
APP-208ENST00000439274 SMIM1B2RUZ4 78 aa10.98□□□□□ -0.65
APP-208ENST00000439274 SOSTDC1Q6X4U4 206 aa10.98□□□□□ -0.65
APP-208ENST00000439274 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
APP-208ENST00000439274 K7EQD1 137 aa10.97□□□□□ -0.65
APP-208ENST00000439274 CIRBPQ14011 172 aaKnown RBP10.97□□□□□ -0.65
APP-208ENST00000439274 SNCGO76070 127 aa10.97□□□□□ -0.65
APP-208ENST00000439274 RPL36AP83881 106 aaKnown RBP10.97□□□□□ -0.65
APP-208ENST00000439274 RPL36ALQ969Q0 106 aaKnown RBP10.97□□□□□ -0.65
APP-208ENST00000439274 ANAPC13Q9BS18 74 aa10.97□□□□□ -0.65
APP-208ENST00000439274 ITPR3Q14573 2671 aa10.96□□□□□ -0.65
APP-208ENST00000439274 H3BT86 120 aa10.96□□□□□ -0.66
APP-208ENST00000439274 NOP10Q9NPE3 64 aaKnown RBP10.95□□□□□ -0.66
APP-208ENST00000439274 CCDC168Q8NDH2 2452 aa10.95□□□□□ -0.66
APP-208ENST00000439274 PRIMA1Q86XR5 153 aa10.95□□□□□ -0.66
APP-208ENST00000439274 PDZD2O15018 2839 aa10.94□□□□□ -0.66
APP-208ENST00000439274 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
APP-208ENST00000439274 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
APP-208ENST00000439274 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
APP-208ENST00000439274 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
APP-208ENST00000439274 WFDC10AQ9H1F0 79 aa10.94□□□□□ -0.66
APP-208ENST00000439274 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
APP-208ENST00000439274 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
APP-208ENST00000439274 HELZ2Q9BYK8 2649 aaKnown RBP10.94□□□□□ -0.66
APP-208ENST00000439274 WFDC11Q8NEX6 87 aa10.94□□□□□ -0.66
APP-208ENST00000439274 LOC100131303A0A0U1RQF7 123 aa10.93□□□□□ -0.66
APP-208ENST00000439274 F5H768 121 aa10.93□□□□□ -0.66
APP-208ENST00000439274 CCL24O00175 119 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms