RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TMEM61Q8N0U2 210 aa9.89□□□□□ -0.83
PCNX3-202ENST00000439247 VSIG2Q96IQ7 327 aa9.89□□□□□ -0.83
PCNX3-202ENST00000439247 TLN2Q9Y4G6 2542 aa9.89□□□□□ -0.83
PCNX3-202ENST00000439247 LST1O00453 97 aa9.89□□□□□ -0.83
PCNX3-202ENST00000439247 COX6CP09669 75 aa9.88□□□□□ -0.83
PCNX3-202ENST00000439247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.88□□□□□ -0.83
PCNX3-202ENST00000439247 A0A096LNT2 108 aa9.87□□□□□ -0.83
PCNX3-202ENST00000439247 CITED2Q99967 270 aaPredicted RBP9.87□□□□□ -0.83
PCNX3-202ENST00000439247 FLNAP21333 2647 aaKnown RBP9.87□□□□□ -0.83
PCNX3-202ENST00000439247 KRTAP1-3Q8IUG1 177 aa9.87□□□□□ -0.83
PCNX3-202ENST00000439247 SPANXDQ9BXN6 97 aa9.87□□□□□ -0.83
PCNX3-202ENST00000439247 SPANXCQ9NY87 97 aa9.87□□□□□ -0.83
PCNX3-202ENST00000439247 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
PCNX3-202ENST00000439247 H3BT86 120 aa9.87□□□□□ -0.83
PCNX3-202ENST00000439247 LINC01600Q96MT4 127 aa9.87□□□□□ -0.83
PCNX3-202ENST00000439247 MXRA5Q9NR99 2828 aa9.86□□□□□ -0.83
PCNX3-202ENST00000439247 SMCR5Q8TEV8 140 aa9.86□□□□□ -0.83
PCNX3-202ENST00000439247 C2CD3Q4AC94 2353 aa9.86□□□□□ -0.83
PCNX3-202ENST00000439247 Q8N2B8 174 aa9.86□□□□□ -0.83
PCNX3-202ENST00000439247 LINC00467Q9BRT7 94 aa9.86□□□□□ -0.83
PCNX3-202ENST00000439247 FAM236AA0A1B0GUQ0 79 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 FAM236BA0A1B0GV22 79 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 ACANP16112 2415 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 AVPP01185 164 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 COX6A2Q02221 97 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 Q96MF0 132 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 CHCHD7Q9BUK0 85 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 TNFRSF18Q9Y5U5 241 aa9.85□□□□□ -0.83
PCNX3-202ENST00000439247 NOTCH3Q9UM47 2321 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 NDUFA7O95182 113 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 SYNJ2BPP57105 145 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 UBE2D4Q9Y2X8 147 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 A6NDX4 124 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 MSMBP08118 114 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 SNRPD3P62318 126 aaKnown RBP9.84□□□□□ -0.83
PCNX3-202ENST00000439247 WFDC11Q8NEX6 87 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 PYGO1Q9Y3Y4 419 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 CR1P17927 2039 aa9.84□□□□□ -0.83
PCNX3-202ENST00000439247 DSCR9P59020 149 aa9.83□□□□□ -0.84
PCNX3-202ENST00000439247 K7EQG2 157 aa9.82□□□□□ -0.84
PCNX3-202ENST00000439247 TMEM101Q96IK0 257 aa9.82□□□□□ -0.84
PCNX3-202ENST00000439247 LINC01587Q99440 93 aa9.82□□□□□ -0.84
PCNX3-202ENST00000439247 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
PCNX3-202ENST00000439247 MYO9AB2RTY4 2548 aa9.82□□□□□ -0.84
PCNX3-202ENST00000439247 FLNBO75369 2602 aaKnown RBP9.82□□□□□ -0.84
PCNX3-202ENST00000439247 SONP18583 2426 aaKnown RBP9.82□□□□□ -0.84
PCNX3-202ENST00000439247 SOSTDC1Q6X4U4 206 aa9.81□□□□□ -0.84
PCNX3-202ENST00000439247 K7EMT4 169 aa9.81□□□□□ -0.84
PCNX3-202ENST00000439247 DEFB121Q5J5C9 76 aa9.81□□□□□ -0.84
PCNX3-202ENST00000439247 Q9H8V8 135 aa9.81□□□□□ -0.84
PCNX3-202ENST00000439247 OTOGQ6ZRI0 2925 aa9.81□□□□□ -0.84
PCNX3-202ENST00000439247 B4DSR2 109 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 H3BUA1 57 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 CFHR3Q02985 330 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 HIST2H2BDQ6DRA6 164 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 PPDPFQ9H3Y8 114 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 TRBV7-7A0A0K0K1E9 115 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 LRRC75A-AS1Q8N1F1 130 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 LINC00308Q8TCZ7 52 aa9.8□□□□□ -0.84
PCNX3-202ENST00000439247 FAM240AA0A1B0GVK7 77 aa9.79□□□□□ -0.84
PCNX3-202ENST00000439247 DAZ2Q13117 558 aaKnown RBP9.79□□□□□ -0.84
PCNX3-202ENST00000439247 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
PCNX3-202ENST00000439247 FAM218AQ96MZ4 157 aa9.79□□□□□ -0.84
PCNX3-202ENST00000439247 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
PCNX3-202ENST00000439247 KLK5Q9Y337 293 aaPredicted RBP9.79□□□□□ -0.84
PCNX3-202ENST00000439247 IGHV4-31P0DP07 118 aa9.78□□□□□ -0.84
PCNX3-202ENST00000439247 RS1O15537 224 aa9.78□□□□□ -0.84
PCNX3-202ENST00000439247 PSMB8P28062 276 aa9.78□□□□□ -0.84
PCNX3-202ENST00000439247 LINC01356Q8N9X3 169 aa9.78□□□□□ -0.84
PCNX3-202ENST00000439247 YAE1D1Q9NRH1 226 aa9.78□□□□□ -0.84
PCNX3-202ENST00000439247 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
PCNX3-202ENST00000439247 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
PCNX3-202ENST00000439247 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
PCNX3-202ENST00000439247 MRPL23Q16540 153 aaKnown RBP9.78□□□□□ -0.84
PCNX3-202ENST00000439247 HOXD3P31249 432 aaPredicted RBP9.77□□□□□ -0.85
PCNX3-202ENST00000439247 Q9HAA7 133 aa9.77□□□□□ -0.85
PCNX3-202ENST00000439247 NDUFA1O15239 70 aa9.77□□□□□ -0.85
PCNX3-202ENST00000439247 IGHV4-59P01825 116 aa9.77□□□□□ -0.85
PCNX3-202ENST00000439247 DEFB131AP59861 70 aa9.77□□□□□ -0.85
PCNX3-202ENST00000439247 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
PCNX3-202ENST00000439247 IGHV3OR16-12A0A075B7B8 117 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 LINC00694P0DN24 101 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 C4orf48Q5BLP8 95 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 COX7A2LO14548 114 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
PCNX3-202ENST00000439247 DGAT2L7PQ6IED9 249 aa9.75□□□□□ -0.85
PCNX3-202ENST00000439247 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
PCNX3-202ENST00000439247 BAALC-AS2P0C853 105 aa9.75□□□□□ -0.85
PCNX3-202ENST00000439247 C18orf65Q6ZTR6 163 aa9.75□□□□□ -0.85
PCNX3-202ENST00000439247 VPREB3Q9UKI3 123 aa9.75□□□□□ -0.85
PCNX3-202ENST00000439247 LINC00242Q5T6M2 205 aa9.74□□□□□ -0.85
PCNX3-202ENST00000439247 ANK3Q12955 4377 aaKnown RBP9.74□□□□□ -0.85
PCNX3-202ENST00000439247 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
PCNX3-202ENST00000439247 CIRBPQ14011 172 aaKnown RBP9.73□□□□□ -0.85
PCNX3-202ENST00000439247 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms