RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 RPL35AP18077 110 aaKnown RBP8.7□□□□□ -1.02
HDAC8-214ENST00000439122 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
HDAC8-214ENST00000439122 K7EQD1 137 aa8.7□□□□□ -1.02
HDAC8-214ENST00000439122 PLA2G2AP14555 144 aa8.7□□□□□ -1.02
HDAC8-214ENST00000439122 RPL36AP83881 106 aaKnown RBP8.7□□□□□ -1.02
HDAC8-214ENST00000439122 RPL36ALQ969Q0 106 aaKnown RBP8.7□□□□□ -1.02
HDAC8-214ENST00000439122 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
HDAC8-214ENST00000439122 PRSS2P07478 247 aa8.69□□□□□ -1.02
HDAC8-214ENST00000439122 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
HDAC8-214ENST00000439122 SCGB1C2P0DMR2 95 aa8.69□□□□□ -1.02
HDAC8-214ENST00000439122 CMC4P56277 68 aaPredicted RBP8.69□□□□□ -1.02
HDAC8-214ENST00000439122 TRAV4A0A0B4J268 109 aa8.69□□□□□ -1.02
HDAC8-214ENST00000439122 H7C2G1 150 aa8.69□□□□□ -1.02
HDAC8-214ENST00000439122 J3QKU1 62 aa8.69□□□□□ -1.02
HDAC8-214ENST00000439122 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
HDAC8-214ENST00000439122 ZNF418Q8TF45 676 aaPredicted RBP8.69□□□□□ -1.02
HDAC8-214ENST00000439122 TRBV10-1A0A0K0K1A3 114 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 J3QR89 54 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 FASNP49327 2511 aaKnown RBP8.68□□□□□ -1.02
HDAC8-214ENST00000439122 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
HDAC8-214ENST00000439122 TCL1BO95988 128 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 GAGE4Q13068 117 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 GAGE5Q13069 117 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 LITAFQ99732 161 aa8.68□□□□□ -1.02
HDAC8-214ENST00000439122 HIVEP2P31629 2446 aa8.67□□□□□ -1.02
HDAC8-214ENST00000439122 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
HDAC8-214ENST00000439122 HILS1P60008 231 aa8.67□□□□□ -1.02
HDAC8-214ENST00000439122 DAZ2Q13117 558 aaKnown RBP8.67□□□□□ -1.02
HDAC8-214ENST00000439122 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
HDAC8-214ENST00000439122 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
HDAC8-214ENST00000439122 TRBV20-1A0A075B6N2 111 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-214ENST00000439122 A0A0B4J2C4 111 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 IGHV3-33P01772 117 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 GAGE7O76087 117 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 GAGE12FP0CL80 117 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 GAGE12GP0CL81 117 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 GAGE12IP0CL82 117 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-214ENST00000439122 COX6A2Q02221 97 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-214ENST00000439122 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
HDAC8-214ENST00000439122 NDUFA7O95182 113 aa8.65□□□□□ -1.02
HDAC8-214ENST00000439122 INSL3P51460 131 aa8.65□□□□□ -1.02
HDAC8-214ENST00000439122 TIRAPP58753 221 aa8.65□□□□□ -1.02
HDAC8-214ENST00000439122 Q1RN00 199 aa8.65□□□□□ -1.02
HDAC8-214ENST00000439122 ZFAND6Q6FIF0 208 aa8.65□□□□□ -1.02
HDAC8-214ENST00000439122 SMR3AQ99954 134 aa8.65□□□□□ -1.02
HDAC8-214ENST00000439122 PLAC8L1A1L4L8 177 aa8.65□□□□□ -1.03
HDAC8-214ENST00000439122 NPC2P61916 151 aa8.65□□□□□ -1.03
HDAC8-214ENST00000439122 TMEM101Q96IK0 257 aa8.65□□□□□ -1.03
HDAC8-214ENST00000439122 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.03
HDAC8-214ENST00000439122 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.03
HDAC8-214ENST00000439122 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
HDAC8-214ENST00000439122 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
HDAC8-214ENST00000439122 HERVK_113P63121 156 aa8.64□□□□□ -1.03
HDAC8-214ENST00000439122 LINC00242Q5T6M2 205 aa8.64□□□□□ -1.03
HDAC8-214ENST00000439122 SPANXDQ9BXN6 97 aa8.64□□□□□ -1.03
HDAC8-214ENST00000439122 SPANXCQ9NY87 97 aa8.64□□□□□ -1.03
HDAC8-214ENST00000439122 MIAQ16674 131 aa8.63□□□□□ -1.03
HDAC8-214ENST00000439122 CSNK1G2-AS1Q8NCQ2 148 aa8.63□□□□□ -1.03
HDAC8-214ENST00000439122 UBE2L6O14933 153 aa8.63□□□□□ -1.03
HDAC8-214ENST00000439122 CSDC2Q9Y534 153 aaKnown RBP8.63□□□□□ -1.03
HDAC8-214ENST00000439122 NOTCH2Q04721 2471 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 LOC100131303A0A0U1RQF7 123 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 DAND5Q8N907 189 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 TRGV4A0A0C4DH28 118 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 GAGE12HA6NDE8 117 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 NDUFA1O15239 70 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 FOXI1Q12951 378 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 SBSPONQ8IVN8 264 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
HDAC8-214ENST00000439122 PF4P02776 101 aa8.61□□□□□ -1.03
HDAC8-214ENST00000439122 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
HDAC8-214ENST00000439122 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
HDAC8-214ENST00000439122 HECTD1Q9ULT8 2610 aa8.61□□□□□ -1.03
HDAC8-214ENST00000439122 FN1P02751 2386 aaKnown RBP8.61□□□□□ -1.03
HDAC8-214ENST00000439122 SMAGPQ0VAQ4 97 aa8.6□□□□□ -1.03
HDAC8-214ENST00000439122 OVOL2Q9BRP0 275 aa8.6□□□□□ -1.03
HDAC8-214ENST00000439122 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
HDAC8-214ENST00000439122 Q9H8V8 135 aa8.6□□□□□ -1.03
HDAC8-214ENST00000439122 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
HDAC8-214ENST00000439122 TRBV6-4A0A1B0GX49 114 aa8.6□□□□□ -1.03
HDAC8-214ENST00000439122 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
HDAC8-214ENST00000439122 ZNF625Q96I27 306 aaPredicted RBP8.6□□□□□ -1.03
HDAC8-214ENST00000439122 GCN1Q92616 2671 aaKnown RBP8.6□□□□□ -1.03
HDAC8-214ENST00000439122 C9JAW5 83 aa8.59□□□□□ -1.03
HDAC8-214ENST00000439122 TIMM17BO60830 172 aa8.59□□□□□ -1.03
HDAC8-214ENST00000439122 KRTAP10-3P60369 221 aa8.59□□□□□ -1.03
HDAC8-214ENST00000439122 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
HDAC8-214ENST00000439122 TRIAP1O43715 76 aa8.59□□□□□ -1.03
HDAC8-214ENST00000439122 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
HDAC8-214ENST00000439122 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms