RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
TSC2-206ENST00000439117 IGHV4-31P0DP07 118 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 DNAJC9-AS1A6NH13 148 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 C4orf3Q8WVX3 66 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 IBA57-AS1B1ANH7 110 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 TIRAPP58753 221 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 DEFB1P60022 68 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
TSC2-206ENST00000439117 GOLGB1Q14789 3259 aaKnown RBP11.24□□□□□ -0.61
TSC2-206ENST00000439117 Q6JHZ5 121 aa11.23□□□□□ -0.61
TSC2-206ENST00000439117 HRCT1Q6UXD1 115 aa11.23□□□□□ -0.61
TSC2-206ENST00000439117 UNQ9165/PRO28630Q6UXU0 137 aa11.23□□□□□ -0.61
TSC2-206ENST00000439117 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
TSC2-206ENST00000439117 PYGO1Q9Y3Y4 419 aa11.23□□□□□ -0.61
TSC2-206ENST00000439117 HHLA3Q9XRX5 114 aa11.23□□□□□ -0.61
TSC2-206ENST00000439117 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
TSC2-206ENST00000439117 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
TSC2-206ENST00000439117 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
TSC2-206ENST00000439117 LINC01548A6NM66 108 aa11.22□□□□□ -0.61
TSC2-206ENST00000439117 H7C423 109 aa11.22□□□□□ -0.61
TSC2-206ENST00000439117 FAM19A3Q7Z5A8 133 aa11.22□□□□□ -0.61
TSC2-206ENST00000439117 TMEM263Q8WUH6 116 aaKnown RBP11.21□□□□□ -0.61
TSC2-206ENST00000439117 LYRM9A8MSI8 78 aa11.21□□□□□ -0.62
TSC2-206ENST00000439117 IGF1P05019 195 aa11.21□□□□□ -0.62
TSC2-206ENST00000439117 NRACQ8N912 160 aa11.21□□□□□ -0.62
TSC2-206ENST00000439117 LRP4O75096 1905 aa11.21□□□□□ -0.62
TSC2-206ENST00000439117 Q6YL49 198 aa11.2□□□□□ -0.62
TSC2-206ENST00000439117 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
TSC2-206ENST00000439117 CENPFP49454 3210 aa11.2□□□□□ -0.62
TSC2-206ENST00000439117 SLPIP03973 132 aa11.2□□□□□ -0.62
TSC2-206ENST00000439117 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
TSC2-206ENST00000439117 EBI3Q14213 229 aa11.19□□□□□ -0.62
TSC2-206ENST00000439117 SERP1Q9Y6X1 66 aa11.19□□□□□ -0.62
TSC2-206ENST00000439117 LINC00467Q9BRT7 94 aa11.19□□□□□ -0.62
TSC2-206ENST00000439117 M0QY20 66 aa11.19□□□□□ -0.62
TSC2-206ENST00000439117 SPART-AS1P0CW21 52 aa11.19□□□□□ -0.62
TSC2-206ENST00000439117 SORL1Q92673 2214 aa11.19□□□□□ -0.62
TSC2-206ENST00000439117 SPTBN4Q9H254 2564 aa11.19□□□□□ -0.62
TSC2-206ENST00000439117 LY6LH3BQJ8 138 aa11.18□□□□□ -0.62
TSC2-206ENST00000439117 UBE2D1P51668 147 aa11.18□□□□□ -0.62
TSC2-206ENST00000439117 SNURFQ9Y675 71 aa11.18□□□□□ -0.62
TSC2-206ENST00000439117 SCXQ7RTU7 201 aa11.18□□□□□ -0.62
TSC2-206ENST00000439117 URB1-AS1Q96HZ7 61 aa11.18□□□□□ -0.62
TSC2-206ENST00000439117 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
TSC2-206ENST00000439117 Q6ZS46 218 aa11.17□□□□□ -0.62
TSC2-206ENST00000439117 UBE2D3P61077 147 aa11.16□□□□□ -0.62
TSC2-206ENST00000439117 UBE2D2P62837 147 aa11.16□□□□□ -0.62
TSC2-206ENST00000439117 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
TSC2-206ENST00000439117 SEC61GP60059 68 aa11.16□□□□□ -0.62
TSC2-206ENST00000439117 CDSNQ15517 529 aa11.15□□□□□ -0.62
TSC2-206ENST00000439117 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
TSC2-206ENST00000439117 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
TSC2-206ENST00000439117 H0Y9J4 135 aa11.15□□□□□ -0.62
TSC2-206ENST00000439117 PRRC2AP48634 2157 aaKnown RBP11.14□□□□□ -0.63
TSC2-206ENST00000439117 CHD8Q9HCK8 2581 aa11.14□□□□□ -0.63
TSC2-206ENST00000439117 TRAV7A0A075B6U4 112 aa11.14□□□□□ -0.63
TSC2-206ENST00000439117 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
TSC2-206ENST00000439117 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
TSC2-206ENST00000439117 KLK12Q9UKR0 248 aa11.13□□□□□ -0.63
TSC2-206ENST00000439117 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
TSC2-206ENST00000439117 A6NED7 52 aa11.12□□□□□ -0.63
TSC2-206ENST00000439117 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
TSC2-206ENST00000439117 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
TSC2-206ENST00000439117 USP9XQ93008 2570 aaPredicted RBP11.11□□□□□ -0.63
TSC2-206ENST00000439117 CCKP06307 115 aa11.11□□□□□ -0.63
TSC2-206ENST00000439117 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
TSC2-206ENST00000439117 MIFP14174 115 aa11.11□□□□□ -0.63
TSC2-206ENST00000439117 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
TSC2-206ENST00000439117 ZFAND3Q9H8U3 227 aa11.11□□□□□ -0.63
TSC2-206ENST00000439117 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
TSC2-206ENST00000439117 ZFYVE26Q68DK2 2539 aa11.11□□□□□ -0.63
TSC2-206ENST00000439117 IGKV4-1P06312 121 aa11.1□□□□□ -0.63
TSC2-206ENST00000439117 K7EQG2 157 aa11.1□□□□□ -0.63
TSC2-206ENST00000439117 Q6ZSV7 163 aa11.1□□□□□ -0.63
TSC2-206ENST00000439117 UBE2AP49459 152 aa11.1□□□□□ -0.63
TSC2-206ENST00000439117 COL5A1P20908 1838 aaPredicted RBP11.1□□□□□ -0.63
TSC2-206ENST00000439117 TSHBP01222 138 aa11.09□□□□□ -0.63
TSC2-206ENST00000439117 CSDC2Q9Y534 153 aaKnown RBP11.09□□□□□ -0.63
TSC2-206ENST00000439117 ESM1Q9NQ30 184 aa11.08□□□□□ -0.64
TSC2-206ENST00000439117 SMIM11BQ8TCY0 68 aa11.07□□□□□ -0.64
TSC2-206ENST00000439117 USP9YO00507 2555 aaPredicted RBP11.07□□□□□ -0.64
TSC2-206ENST00000439117 A8MZ25 164 aa11.07□□□□□ -0.64
TSC2-206ENST00000439117 CCL18P55774 89 aa11.07□□□□□ -0.64
TSC2-206ENST00000439117 Q6ZTI0 123 aa11.07□□□□□ -0.64
TSC2-206ENST00000439117 ABCA12Q86UK0 2595 aa11.07□□□□□ -0.64
TSC2-206ENST00000439117 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 REG3AQ06141 175 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 Q6ZQY7 126 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 Q8N6K4 173 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 PRR15LQ9BU68 103 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
TSC2-206ENST00000439117 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 PLA2G2AP14555 144 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 HCFC1P51610 2035 aa11.06□□□□□ -0.64
TSC2-206ENST00000439117 CRIP2P52943 208 aaPredicted RBP11.05□□□□□ -0.64
TSC2-206ENST00000439117 LINC00269Q8N2A0 174 aa11.05□□□□□ -0.64
TSC2-206ENST00000439117 CHCHD10Q8WYQ3 142 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms