RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	GEMIN7	Q9H840	131 aa	Known RBP	11.52	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	IGHV3OR16-12	A0A075B7B8	117 aa		11.51	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145		M0QXV9	152 aa		11.51	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	GIG44	P09565	113 aa	Predicted RBP	11.51	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	SCGB1C2	P0DMR2	95 aa		11.51	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	CDKN2A-AS1	Q9UH64	79 aa		11.51	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	CSDC2	Q9Y534	153 aa	Known RBP	11.51	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	TRAV4	A0A0B4J268	109 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145		A8MZ25	164 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145		K7EQD1	137 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	CMC4	P56277	68 aa	Predicted RBP	11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	TLN2	Q9Y4G6	2542 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	AKAP9	Q99996	3911 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	SCGB1A1	P11684	91 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145		Q6ZTI0	123 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	LINC01006	Q8NI28	216 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	PPDPFL	Q8WWR9	84 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	CARD19	Q96LW7	228 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	FAM110A	Q9BQ89	295 aa		11.5	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	IGLV5-39	A0A0G2JS06	123 aa		11.49	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	DAZ2	Q13117	558 aa	Known RBP	11.49	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	GTSF1L	Q9H1H1	148 aa		11.49	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	NBPF19	A0A087WUL8	3843 aa		11.49	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	TRBV30	A0A0K0K1B3	111 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	NDUFA1	O15239	70 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	RNASE1	P07998	156 aa	Known RBP	11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	RPL36A	P83881	106 aa	Known RBP	11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	NTM-AS1	Q6ZSK4	140 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	DAZ4	Q86SG3	579 aa	Known RBP	11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	RPL36AL	Q969Q0	106 aa	Known RBP	11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	TMEM101	Q96IK0	257 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	DAZ3	Q9NR90	486 aa	Known RBP	11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	LINC00694	P0DN24	101 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	COX6A2	Q02221	97 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	LINC00242	Q5T6M2	205 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	DGAT2L7P	Q6IED9	249 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	LINC01600	Q96MT4	127 aa		11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	GCN1	Q92616	2671 aa	Known RBP	11.48	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	PLAC8L1	A1L4L8	177 aa		11.47	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	C19orf73	Q9NVV2	129 aa		11.47	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.47	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	SON	P18583	2426 aa	Known RBP	11.47	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	PRSS2	P07478	247 aa		11.47	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	HERVK_113	P63121	156 aa		11.47	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145		H7C2G1	150 aa		11.46	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	IGLV1-51	P01701	117 aa		11.46	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	IFITM1	P13164	125 aa		11.46	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	CDIP1	Q9H305	208 aa		11.46	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	YAE1D1	Q9NRH1	226 aa		11.46	□□□□□ -0.57
HLA-DQB2-231	ENST00000435145	ANKRD29	Q8N6D5	301 aa		11.45	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	TRIAP1	O43715	76 aa		11.45	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	SLC25A20	O43772	301 aa		11.45	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	FASN	P49327	2511 aa	Known RBP	11.44	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	C16orf74	Q96GX8	76 aa		11.44	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	NOP10	Q9NPE3	64 aa	Known RBP	11.44	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	FLNA	P21333	2647 aa	Known RBP	11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145		C9JAW5	83 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	SMAGP	Q0VAQ4	97 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	ATXN8	Q156A1	80 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145		Q1RN00	199 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	HIST2H2BC	Q6DN03	193 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	CSNK1G2-AS1	Q8NCQ2	148 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	OVOL2	Q9BRP0	275 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	CDC42SE2	Q9NRR3	84 aa		11.43	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	GAGE12J	A6NER3	117 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	SMIM1	B2RUZ4	78 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	GAGE4	Q13068	117 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	GAGE5	Q13069	117 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	LINC01620	Q4KN68	170 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	WFDC10A	Q9H1F0	79 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	ICOS	Q9Y6W8	199 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	CIDEA	O60543	219 aa		11.42	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145		F5H768	121 aa		11.41	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	NDUFA7	O95182	113 aa		11.41	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	NF1	P21359	2839 aa		11.41	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	TRBV6-4	A0A1B0GX49	114 aa		11.4	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	PDZD2	O15018	2839 aa		11.4	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145	WNK1	Q9H4A3	2382 aa		11.4	□□□□□ -0.58
HLA-DQB2-231	ENST00000435145		Q9H8V8	135 aa		11.4	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	CIRBP	Q14011	172 aa	Known RBP	11.39	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	ZNF625	Q96I27	306 aa	Predicted RBP	11.39	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	TMEM243	Q9BU79	118 aa		11.39	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	TRAV13-1	A0A0B4J241	112 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145		H7C423	109 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	GAGE7	O76087	117 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	GAGE12F	P0CL80	117 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	GAGE12G	P0CL81	117 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	GAGE12I	P0CL82	117 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	RPL35A	P18077	110 aa	Known RBP	11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	NPC2	P61916	151 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	CCDC168	Q8NDH2	2452 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	TRBV10-2	A0A0K0K1G8	114 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	HILS1	P60008	231 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	DAND5	Q8N907	189 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	LINC00308	Q8TCZ7	52 aa		11.38	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	SETX	Q7Z333	2677 aa	Known RBP	11.37	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	TRGV2	A0A075B6R0	118 aa		11.36	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	PPDPF	Q9H3Y8	114 aa		11.36	□□□□□ -0.59
HLA-DQB2-231	ENST00000435145	LOC100131303	A0A0U1RQF7	123 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms