RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ERASQ7Z444 233 aa15.75■□□□□ 0.11
SMARCAL1-208ENST00000434435 TRAV9-2A0A087WT02 112 aa15.74■□□□□ 0.11
SMARCAL1-208ENST00000434435 IGIPA6NJ69 53 aa15.74■□□□□ 0.11
SMARCAL1-208ENST00000434435 NPSP0C0P6 89 aa15.74■□□□□ 0.11
SMARCAL1-208ENST00000434435 Q6ZUT4 128 aa15.74■□□□□ 0.11
SMARCAL1-208ENST00000434435 C10orf126Q8N4M7 172 aa15.74■□□□□ 0.11
SMARCAL1-208ENST00000434435 K7EP13 123 aa15.73■□□□□ 0.11
SMARCAL1-208ENST00000434435 MRPS36P82909 103 aaKnown RBP15.73■□□□□ 0.11
SMARCAL1-208ENST00000434435 TMEM141Q96I45 108 aa15.73■□□□□ 0.11
SMARCAL1-208ENST00000434435 CDC42SE2Q9NRR3 84 aa15.73■□□□□ 0.11
SMARCAL1-208ENST00000434435 KLK12Q9UKR0 248 aa15.73■□□□□ 0.11
SMARCAL1-208ENST00000434435 IGLV4-3A0A075B6K6 122 aa15.72■□□□□ 0.11
SMARCAL1-208ENST00000434435 ATP5LO75964 103 aa15.72■□□□□ 0.11
SMARCAL1-208ENST00000434435 LEPROTL1O95214 131 aa15.72■□□□□ 0.11
SMARCAL1-208ENST00000434435 TTC32Q5I0X7 151 aa15.72■□□□□ 0.11
SMARCAL1-208ENST00000434435 Q6ZN92 141 aa15.72■□□□□ 0.11
SMARCAL1-208ENST00000434435 ZNF664Q8N3J9 261 aa15.72■□□□□ 0.11
SMARCAL1-208ENST00000434435 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.71■□□□□ 0.11
SMARCAL1-208ENST00000434435 PAPPA-AS1Q5QFB9 102 aa15.71■□□□□ 0.11
SMARCAL1-208ENST00000434435 OPRPNQ99935 248 aaPredicted RBP15.7■□□□□ 0.1
SMARCAL1-208ENST00000434435 HSPB8Q9UJY1 196 aa15.7■□□□□ 0.1
SMARCAL1-208ENST00000434435 NBDYA0A0U1RRE5 68 aa15.69■□□□□ 0.1
SMARCAL1-208ENST00000434435 CRPP02741 224 aa15.69■□□□□ 0.1
SMARCAL1-208ENST00000434435 FABP4P15090 132 aa15.69■□□□□ 0.1
SMARCAL1-208ENST00000434435 SNRPEP62304 92 aaKnown RBP15.69■□□□□ 0.1
SMARCAL1-208ENST00000434435 RNASE13Q5GAN3 156 aaKnown RBP15.69■□□□□ 0.1
SMARCAL1-208ENST00000434435 HIST3H2BBQ8N257 126 aa15.69■□□□□ 0.1
SMARCAL1-208ENST00000434435 LINC00269Q8N2A0 174 aa15.69■□□□□ 0.1
SMARCAL1-208ENST00000434435 S100A2P29034 98 aa15.68■□□□□ 0.1
SMARCAL1-208ENST00000434435 CLPSL2Q6UWE3 100 aa15.68■□□□□ 0.1
SMARCAL1-208ENST00000434435 FAM104AQ969W3 186 aa15.68■□□□□ 0.1
SMARCAL1-208ENST00000434435 IFI27L1Q96BM0 104 aa15.68■□□□□ 0.1
SMARCAL1-208ENST00000434435 PACRGQ96M98 296 aaPredicted RBP15.68■□□□□ 0.1
SMARCAL1-208ENST00000434435 DNAH1Q9P2D7 4330 aa15.67■□□□□ 0.1
SMARCAL1-208ENST00000434435 LCE6AA0A183 80 aa15.67■□□□□ 0.1
SMARCAL1-208ENST00000434435 C5orf52A6NGY3 159 aa15.67■□□□□ 0.1
SMARCAL1-208ENST00000434435 TEX43Q6ZNM6 134 aa15.67■□□□□ 0.1
SMARCAL1-208ENST00000434435 IBA57-AS1B1ANH7 110 aa15.66■□□□□ 0.1
SMARCAL1-208ENST00000434435 REG3AQ06141 175 aa15.66■□□□□ 0.1
SMARCAL1-208ENST00000434435 LINC00173Q6ZV60 143 aa15.66■□□□□ 0.1
SMARCAL1-208ENST00000434435 BAALCQ8WXS3 180 aa15.66■□□□□ 0.1
SMARCAL1-208ENST00000434435 UBE2WQ96B02 151 aa15.66■□□□□ 0.1
SMARCAL1-208ENST00000434435 VCX2Q9H322 139 aa15.66■□□□□ 0.1
SMARCAL1-208ENST00000434435 PRR34Q9NV39 138 aa15.66■□□□□ 0.1
SMARCAL1-208ENST00000434435 IGKV3OR2-268A0A0C4DH90 116 aa15.65■□□□□ 0.1
SMARCAL1-208ENST00000434435 AMELXQ99217 191 aa15.65■□□□□ 0.1
SMARCAL1-208ENST00000434435 C2orf88Q9BSF0 95 aa15.65■□□□□ 0.1
SMARCAL1-208ENST00000434435 KRTAP1-5Q9BYS1 174 aa15.65■□□□□ 0.1
SMARCAL1-208ENST00000434435 IFITM10A6NMD0 228 aa15.64■□□□□ 0.09
SMARCAL1-208ENST00000434435 DNAH6Q9C0G6 4158 aa15.64■□□□□ 0.09
SMARCAL1-208ENST00000434435 ENHOQ6UWT2 76 aa15.63■□□□□ 0.09
SMARCAL1-208ENST00000434435 TRAV8-3A0A0A6YYJ7 113 aa15.62■□□□□ 0.09
SMARCAL1-208ENST00000434435 M0R2N4 97 aa15.62■□□□□ 0.09
SMARCAL1-208ENST00000434435 PMVKQ15126 192 aa15.62■□□□□ 0.09
SMARCAL1-208ENST00000434435 MIAQ16674 131 aa15.62■□□□□ 0.09
SMARCAL1-208ENST00000434435 ZC2HC1BQ5TFG8 222 aa15.62■□□□□ 0.09
SMARCAL1-208ENST00000434435 PRSS1P07477 247 aa15.61■□□□□ 0.09
SMARCAL1-208ENST00000434435 HIST1H2BLQ99880 126 aa15.61■□□□□ 0.09
SMARCAL1-208ENST00000434435 Q9HAA7 133 aa15.61■□□□□ 0.09
SMARCAL1-208ENST00000434435 TRAV13-1A0A0B4J241 112 aa15.6■□□□□ 0.09
SMARCAL1-208ENST00000434435 LINC00959A0A1B0GUT2 108 aa15.6■□□□□ 0.09
SMARCAL1-208ENST00000434435 Q6ZR54 194 aa15.6■□□□□ 0.09
SMARCAL1-208ENST00000434435 MAP1LC3CQ9BXW4 147 aa15.6■□□□□ 0.09
SMARCAL1-208ENST00000434435 TRAV8-4A0A0B4J246 113 aa15.59■□□□□ 0.09
SMARCAL1-208ENST00000434435 SS18Q15532 418 aa15.59■□□□□ 0.09
SMARCAL1-208ENST00000434435 RMI2Q96E14 147 aa15.58■□□□□ 0.08
SMARCAL1-208ENST00000434435 CST9LQ9H4G1 147 aa15.58■□□□□ 0.08
SMARCAL1-208ENST00000434435 TRAV12-1A0A0B4J245 112 aa15.57■□□□□ 0.08
SMARCAL1-208ENST00000434435 PRSS29PA6NIE9 313 aa15.57■□□□□ 0.08
SMARCAL1-208ENST00000434435 H0Y8G0 127 aa15.57■□□□□ 0.08
SMARCAL1-208ENST00000434435 CCL25O15444 150 aa15.57■□□□□ 0.08
SMARCAL1-208ENST00000434435 UBE2D1P51668 147 aa15.57■□□□□ 0.08
SMARCAL1-208ENST00000434435 C1orf43Q9BWL3 253 aa15.57■□□□□ 0.08
SMARCAL1-208ENST00000434435 IGLV10-54A0A075B6I4 117 aa15.56■□□□□ 0.08
SMARCAL1-208ENST00000434435 IGKV2D-24A0A075B6R9 120 aa15.55■□□□□ 0.08
SMARCAL1-208ENST00000434435 KRTDAPP60985 99 aa15.54■□□□□ 0.08
SMARCAL1-208ENST00000434435 NFE4Q86UQ8 179 aa15.54■□□□□ 0.08
SMARCAL1-208ENST00000434435 KMT2AQ03164 3969 aa15.53■□□□□ 0.08
SMARCAL1-208ENST00000434435 SYS1-DBNDD2H3BUS1 97 aa15.53■□□□□ 0.08
SMARCAL1-208ENST00000434435 C3orf79P0CE67 100 aa15.53■□□□□ 0.08
SMARCAL1-208ENST00000434435 SEC11AP67812 179 aa15.53■□□□□ 0.08
SMARCAL1-208ENST00000434435 CHCHD10Q8WYQ3 142 aaPredicted RBP15.53■□□□□ 0.08
SMARCAL1-208ENST00000434435 CHTOPQ9Y3Y2 248 aaKnown RBP15.53■□□□□ 0.08
SMARCAL1-208ENST00000434435 XCL1P47992 114 aa15.52■□□□□ 0.08
SMARCAL1-208ENST00000434435 FAM19A3Q7Z5A8 133 aa15.52■□□□□ 0.08
SMARCAL1-208ENST00000434435 C6orf223Q8N319 242 aa15.52■□□□□ 0.08
SMARCAL1-208ENST00000434435 TM2D2Q9BX73 214 aa15.52■□□□□ 0.08
SMARCAL1-208ENST00000434435 COX11Q9Y6N1 276 aa15.52■□□□□ 0.08
SMARCAL1-208ENST00000434435 A0A0J9YXV3 536 aa15.51■□□□□ 0.07
SMARCAL1-208ENST00000434435 ODF1Q14990 250 aa15.51■□□□□ 0.07
SMARCAL1-208ENST00000434435 LINC00242Q5T6M2 205 aa15.51■□□□□ 0.07
SMARCAL1-208ENST00000434435 F8VRH5 84 aa15.5■□□□□ 0.07
SMARCAL1-208ENST00000434435 PET117Q6UWS5 81 aa15.5■□□□□ 0.07
SMARCAL1-208ENST00000434435 SACSQ9NZJ4 4579 aa15.49■□□□□ 0.07
SMARCAL1-208ENST00000434435 TINCRA0A1B0GVN0 87 aa15.49■□□□□ 0.07
SMARCAL1-208ENST00000434435 GAGE12HA6NDE8 117 aa15.49■□□□□ 0.07
SMARCAL1-208ENST00000434435 HERVK_113P63121 156 aa15.49■□□□□ 0.07
SMARCAL1-208ENST00000434435 C1orf134Q5TEV5 83 aa15.49■□□□□ 0.07
SMARCAL1-208ENST00000434435 CD164L2Q6UWJ8 174 aa15.49■□□□□ 0.07
SMARCAL1-208ENST00000434435 SPATA12Q7Z6I5 190 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms