RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PRH1P02810 166 aa0.46□□□□□ -2.34
PTPN4-205ENST00000433888 ANK2Q01484 3957 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 SPHKAPQ2M3C7 1700 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 BCE1O60756 84 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 SFT2D2O95562 160 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 MPC2O95563 127 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 IGLC1P0CG04 106 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 COX6A2Q02221 97 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 FAM223AQ8IWN6 122 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 AMELXQ99217 191 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 LINC00472Q9H8W2 130 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 UQCR10Q9UDW1 63 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 LINC01558Q9Y6Z2 57 aa0.45□□□□□ -2.34
PTPN4-205ENST00000433888 CHD9Q3L8U1 2897 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 ABCA3Q99758 1704 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 RIMS1Q86UR5 1692 aaKnown RBP0.44□□□□□ -2.34
PTPN4-205ENST00000433888 WNK3Q9BYP7 1800 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 TRAV30A0A087WSZ9 112 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 MT-ATP8P03928 68 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 TRAPPC2P0DI81 140 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 TRAPPC2BP0DI82 140 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 ASIPP42127 132 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 ATP5EP56381 51 aaPredicted RBP0.44□□□□□ -2.34
PTPN4-205ENST00000433888 SEC11AP67812 179 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 Q6JHZ5 121 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 SMIM4Q8WVI0 70 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 LAMC3Q9Y6N6 1575 aa0.44□□□□□ -2.34
PTPN4-205ENST00000433888 ARHGAP5Q13017 1502 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 FAM135AQ9P2D6 1515 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 NAP1L6A6NFF2 107 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 TMEM262E9PQX1 116 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 UQCR11O14957 56 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 FDCSPQ8NFU4 85 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 NXT2Q9NPJ8 142 aaKnown RBP0.43□□□□□ -2.34
PTPN4-205ENST00000433888 CDC42SE2Q9NRR3 84 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 PLAC8Q9NZF1 115 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 AP4S1Q9Y587 144 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 TNCP24821 2201 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 ARHGEF5Q12774 1597 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 SCN7AQ01118 1682 aa0.43□□□□□ -2.34
PTPN4-205ENST00000433888 ABCC5O15440 1437 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 CNTLNQ9NXG0 1405 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 A0A0G2JND7 137 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 APOC3P02656 99 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 UBA52P62987 128 aaKnown RBP0.42□□□□□ -2.34
PTPN4-205ENST00000433888 SMR3AQ99954 134 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 PRO1854Q9UHT4 67 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 SBF2Q86WG5 1849 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 CELSR2Q9HCU4 2923 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 CACNA1CQ13936 2221 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 ZFYVE16Q7Z3T8 1539 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 LRP6O75581 1613 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 TOP2BQ02880 1626 aa0.42□□□□□ -2.34
PTPN4-205ENST00000433888 PXDNQ92626 1479 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 SHANK2Q9UPX8 1470 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 NAV3Q8IVL0 2385 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 ERCC6L2Q5T890 1561 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 ASXL3Q9C0F0 2248 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 LOC285095A0A1B0GVY8 99 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 FAM223BA6NKX1 122 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 SPINK6Q6UWN8 80 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 LCN9Q8WX39 176 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 PMCHL2Q9BQD1 86 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 FAIMQ9NVQ4 179 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 PRO0255Q9UI72 69 aa0.41□□□□□ -2.34
PTPN4-205ENST00000433888 BDP1A6H8Y1 2624 aa0.4□□□□□ -2.34
PTPN4-205ENST00000433888 ZNF609O15014 1411 aa0.4□□□□□ -2.34
PTPN4-205ENST00000433888 KDM3BQ7LBC6 1761 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 MAPKBP1O60336 1514 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 OTOGQ6ZRI0 2925 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 ZFHX3Q15911 3703 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 FXYD6-FXYD2A0A087WZ82 144 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 M0R143 59 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 UBE2D3P61077 147 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 UBE2D2P62837 147 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 FAM167A-AS1Q96KT0 104 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 CHD1O14646 1710 aa0.4□□□□□ -2.35
PTPN4-205ENST00000433888 HMGXB3Q12766 1538 aa0.39□□□□□ -2.35
PTPN4-205ENST00000433888 LAMC1P11047 1609 aa0.39□□□□□ -2.35
PTPN4-205ENST00000433888 KRTDAPP60985 99 aa0.39□□□□□ -2.35
PTPN4-205ENST00000433888 COX17Q14061 63 aa0.39□□□□□ -2.35
PTPN4-205ENST00000433888 MYO7BQ6PIF6 2116 aa0.39□□□□□ -2.35
PTPN4-205ENST00000433888 MYOM1P52179 1685 aa0.39□□□□□ -2.35
PTPN4-205ENST00000433888 POLQO75417 2590 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 TTC28Q96AY4 2481 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 TOPAZ1Q8N9V7 1692 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 A0A1B0GWA3 101 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 H3BQ15 152 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 PIN1P1O15428 100 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 MGPP08493 103 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 COX6CP09669 75 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 FAUP35544 74 aaKnown RBP0.38□□□□□ -2.35
PTPN4-205ENST00000433888 C10orf113Q5VZT2 155 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 ACBD7Q8N6N7 88 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 ZNF292O60281 2723 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 NSD3Q9BZ95 1437 aa0.38□□□□□ -2.35
PTPN4-205ENST00000433888 PDCD11Q14690 1871 aaKnown RBP0.37□□□□□ -2.35
PTPN4-205ENST00000433888 COL4A6Q14031 1691 aa0.37□□□□□ -2.35
PTPN4-205ENST00000433888 UNC13BO14795 1591 aa0.37□□□□□ -2.35
PTPN4-205ENST00000433888 CACNA1HO95180 2353 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms