RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 KRTAP25-1Q3LHN0 102 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 C10orf128Q5T292 105 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 CLECL1Q8IZS7 167 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 TMEM254Q8TBM7 123 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 TIMM21Q9BVV7 248 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 FXYD6Q9H0Q3 95 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 PRO1854Q9UHT4 67 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 RALGAPBQ86X10 1494 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 ALS2Q96Q42 1657 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 CUL9Q8IWT3 2517 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 ANKRD36CQ5JPF3 1778 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 ARHGEF5Q12774 1597 aa1.4□□□□□ -2.18
CLK1-204ENST00000432425 CDC42BPGQ6DT37 1551 aa1.4□□□□□ -2.18
CLK1-204ENST00000432425 VWDEQ8N2E2 1590 aa1.4□□□□□ -2.18
CLK1-204ENST00000432425 UNC13CQ8NB66 2214 aa1.4□□□□□ -2.18
CLK1-204ENST00000432425 TNRC6BQ9UPQ9 1833 aaKnown RBP1.4□□□□□ -2.18
CLK1-204ENST00000432425 KIF21BO75037 1637 aa1.4□□□□□ -2.18
CLK1-204ENST00000432425 PARP4Q9UKK3 1724 aaKnown RBP1.4□□□□□ -2.19
CLK1-204ENST00000432425 TRBV7-3A0A075B6L6 115 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 A0A087WSZ3 146 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 TMSB15BA0A087X1C1 80 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 TRAV12-3A0A0B4J271 114 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 A0A0J9YX75 114 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 A0A1B0GU33 70 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 ODF3BA8MYP8 253 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 FXYD1O00168 92 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 ERC2-IT1O76042 136 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 GCHFRP30047 84 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 CSAG1Q6PB30 78 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 C6orf201Q7Z4U5 140 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 FAM167A-AS1Q96KT0 104 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 ABCC6O95255 1503 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 ALKQ9UM73 1620 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 TIAM2Q8IVF5 1701 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 NRXN2Q9P2S2 1712 aa1.4□□□□□ -2.19
CLK1-204ENST00000432425 IGLV10-54A0A075B6I4 117 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 HMGN2P05204 90 aaKnown RBP1.39□□□□□ -2.19
CLK1-204ENST00000432425 MIFP14174 115 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 SMIM11AP58511 58 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 SPANXN5Q5MJ07 72 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 SMIM5Q71RC9 77 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 KLF14Q8TD94 323 aaPredicted RBP1.39□□□□□ -2.19
CLK1-204ENST00000432425 FAM103A1Q9BTL3 118 aaKnown RBP1.39□□□□□ -2.19
CLK1-204ENST00000432425 PSENENQ9NZ42 101 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 ARL2-SNX15V9GYD0 113 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 MROH2BQ7Z745 1585 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 UGGT1Q9NYU2 1555 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 PAPPAQ13219 1627 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 ABCA5Q8WWZ7 1642 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 BIVM-ERCC5R4GMW8 1640 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 DNAJC13O75165 2243 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 PKD1L3Q7Z443 1732 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 TRBV25-1A0A075B6N4 114 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 IGHV3OR16-8A0A075B7F1 116 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 MYMXA0A1B0GTQ4 84 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 LOC285095A0A1B0GVY8 99 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 A0A1W2PNM2 257 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 TMEM30CPA0ZSE6 113 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 BCE1O60756 84 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 BAALC-AS2P0C853 105 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 UBE2D1P51668 147 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 PYDC2Q56P42 97 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 DEFB121Q5J5C9 76 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.39□□□□□ -2.19
CLK1-204ENST00000432425 ZNF818PQ6ZRF7 136 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 C9orf163Q8N9P6 203 aa1.39□□□□□ -2.19
CLK1-204ENST00000432425 ABCA4P78363 2273 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 CEP170BQ9Y4F5 1589 aaPredicted RBP1.38□□□□□ -2.19
CLK1-204ENST00000432425 COL4A1P02462 1669 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 ZNF831Q5JPB2 1677 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 IGHV3-64A0A075B6Q5 118 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 CLPSL1A2RUU4 121 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 H3BVH4 76 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 HCRTO43612 131 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 KRTAP26-1Q6PEX3 210 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 ZNF833PQ6ZTB9 187 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 BAGE3Q86Y29 109 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 BAGE2Q86Y30 109 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 LIMD2Q9BT23 127 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 DYNLRB1Q9NP97 96 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 C22orf24Q9Y442 160 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 LHFPL6Q9Y693 200 aa1.38□□□□□ -2.19
CLK1-204ENST00000432425 NKTRP30414 1462 aaKnown RBP1.38□□□□□ -2.19
CLK1-204ENST00000432425 ARFGEF3Q5TH69 2177 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 TRAV12-1A0A0B4J245 112 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 A0A1B0GWA3 101 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 C2orf70A6NJV1 201 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 ZNF815PA8K554 130 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 TMEM14DPA8MWL7 114 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 S100A3P33764 101 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 ERHP84090 104 aaKnown RBP1.37□□□□□ -2.19
CLK1-204ENST00000432425 CDC42SE2Q9NRR3 84 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 NDUFA4L2Q9NRX3 87 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 TMEM14BQ9NUH8 114 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 GNG13Q9P2W3 67 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 DOCK10Q96BY6 2186 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 COL4A5P29400 1685 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 SHPRHQ149N8 1683 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 RREB1Q92766 1687 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms