RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 A0A0J9YY99 117 aa9.17□□□□□ -0.94
DDX56-204ENST00000431640 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
DDX56-204ENST00000431640 FAM104AQ969W3 186 aa9.17□□□□□ -0.94
DDX56-204ENST00000431640 WFDC10AQ9H1F0 79 aa9.17□□□□□ -0.94
DDX56-204ENST00000431640 TRGV2A0A075B6R0 118 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 IGHV3-38A0A0C4DH36 116 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 TRBV6-4A0A1B0GX49 114 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 PLAC8L1A1L4L8 177 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 K7EP13 123 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 K7EP34 96 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 SLC25A29Q8N8R3 303 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 OR5A1Q8NGJ0 315 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 CSDC2Q9Y534 153 aaKnown RBP9.16□□□□□ -0.94
DDX56-204ENST00000431640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
DDX56-204ENST00000431640 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
DDX56-204ENST00000431640 UBE2D3P61077 147 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 UBE2D2P62837 147 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 WFDC9Q8NEX5 89 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 GTSF1LQ9H1H1 148 aa9.16□□□□□ -0.94
DDX56-204ENST00000431640 GAGE12BA1L429 117 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 SMIM9A6NGZ8 99 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 GAGE7O76087 117 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 GAGE12FP0CL80 117 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 GAGE12GP0CL81 117 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 GAGE12IP0CL82 117 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 TIRAPP58753 221 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.95
DDX56-204ENST00000431640 SPCS1Q9Y6A9 102 aa9.15□□□□□ -0.95
DDX56-204ENST00000431640 IGLL5B9A064 214 aa9.14□□□□□ -0.95
DDX56-204ENST00000431640 H7C423 109 aa9.14□□□□□ -0.95
DDX56-204ENST00000431640 KRTAP21-3Q3LHN1 58 aa9.14□□□□□ -0.95
DDX56-204ENST00000431640 GEMIN7Q9H840 131 aaKnown RBP9.14□□□□□ -0.95
DDX56-204ENST00000431640 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
DDX56-204ENST00000431640 IGHV1-58A0A0C4DH39 117 aa9.13□□□□□ -0.95
DDX56-204ENST00000431640 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
DDX56-204ENST00000431640 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
DDX56-204ENST00000431640 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 K7ERJ3 54 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 UBE2D1P51668 147 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 GAGE4Q13068 117 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 GAGE5Q13069 117 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 Q6ZUT4 128 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 DNAH3Q8TD57 4116 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 TMEM238C9JI98 176 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 IGHV3-30-3P0DP02 117 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
DDX56-204ENST00000431640 NAA38Q9BRA0 125 aaKnown RBP9.12□□□□□ -0.95
DDX56-204ENST00000431640 WIPF1O43516 503 aa9.11□□□□□ -0.95
DDX56-204ENST00000431640 IGHV3-30P01768 117 aa9.11□□□□□ -0.95
DDX56-204ENST00000431640 IGHV3-30-5P0DP03 117 aa9.11□□□□□ -0.95
DDX56-204ENST00000431640 HERVK_113P63121 156 aa9.11□□□□□ -0.95
DDX56-204ENST00000431640 OXLD1Q5BKU9 147 aa9.11□□□□□ -0.95
DDX56-204ENST00000431640 SBSPONQ8IVN8 264 aa9.11□□□□□ -0.95
DDX56-204ENST00000431640 TMEM101Q96IK0 257 aa9.11□□□□□ -0.95
DDX56-204ENST00000431640 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
DDX56-204ENST00000431640 UBE2L6O14933 153 aa9.1□□□□□ -0.95
DDX56-204ENST00000431640 FHL2Q14192 279 aa9.1□□□□□ -0.95
DDX56-204ENST00000431640 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
DDX56-204ENST00000431640 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
DDX56-204ENST00000431640 VSIG2Q96IQ7 327 aa9.1□□□□□ -0.95
DDX56-204ENST00000431640 TMEM243Q9BU79 118 aa9.1□□□□□ -0.95
DDX56-204ENST00000431640 IGHV3-64A0A075B6Q5 118 aa9.09□□□□□ -0.95
DDX56-204ENST00000431640 LINC00612Q8N6U2 182 aa9.09□□□□□ -0.95
DDX56-204ENST00000431640 RPL24P83731 157 aaKnown RBP9.08□□□□□ -0.96
DDX56-204ENST00000431640 NOTCH3Q9UM47 2321 aa9.08□□□□□ -0.96
DDX56-204ENST00000431640 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 G3V4G9 280 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 APOC4P55056 127 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 KRTAP10-11P60412 298 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 LINC00694P0DN24 101 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 LYRM7Q5U5X0 104 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
DDX56-204ENST00000431640 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.06□□□□□ -0.96
DDX56-204ENST00000431640 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 SPINK8P0C7L1 97 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 ZFAND6Q6FIF0 208 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 C10orf126Q8N4M7 172 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 CDKN2A-AS1Q9UH64 79 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 X6R8D5 127 aa9.06□□□□□ -0.96
DDX56-204ENST00000431640 F8W1H4 67 aa9.05□□□□□ -0.96
DDX56-204ENST00000431640 TIMM17BO60830 172 aa9.05□□□□□ -0.96
DDX56-204ENST00000431640 APOMO95445 188 aa9.05□□□□□ -0.96
DDX56-204ENST00000431640 TRBV6-8A0A0A6YYG3 113 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 K7ERU9 68 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 CFC1BP0CG36 223 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 CFC1P0CG37 223 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 MUSTN1Q8IVN3 82 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 SPANXDQ9BXN6 97 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 SPANXCQ9NY87 97 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
DDX56-204ENST00000431640 LOC100131303A0A0U1RQF7 123 aa9.03□□□□□ -0.96
DDX56-204ENST00000431640 EGFEM1PQ0D2K5 195 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms