RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FAM107AO95990 144 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 SHBGP04278 402 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 GPX1P07203 203 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 ZNF93P35789 620 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 DEFA1P59665 94 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 PSG9Q00887 426 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 DEFA5Q01523 94 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 ZNF345Q14585 488 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 RPL39P5Q59GN2 51 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 PSMG4Q5JS54 123 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 MBD3L1Q8WWY6 194 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 HOPXQ9BPY8 73 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 CMSS1Q9BQ75 279 aaKnown RBP1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 CYSTM1Q9H1C7 97 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 UQCC1Q9NVA1 299 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 FKBP11Q9NYL4 201 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 CKLFQ9UBR5 152 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRAV30A0A087WSZ9 112 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 A0A0J9YY99 117 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 LOC107986453A0A1B0GWG9 222 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 TMEM14DPA8MWL7 114 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 F8W036 122 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 GNG7O60262 68 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 CRYZL1O95825 349 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 METTL15P1P0C7V9 234 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRAPPC2P0DI81 140 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRAPPC2BP0DI82 140 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 HLA-DRB4P13762 266 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 HTN1P15515 57 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 ARPC4P59998 168 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 KRTAP10-4P60372 401 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 PPP3R1P63098 170 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 WHAMMP3Q1A5X7 153 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 PIGYQ3MUY2 71 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 LINC01554Q52M75 96 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 LYPD5Q6UWN5 251 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 SPINK6Q6UWN8 80 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 LCN15Q6UWW0 184 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 FOXI2Q6ZQN5 318 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 Q6ZQT0 140 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 IDO2Q6ZQW0 420 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 MIR17HGQ75NE6 70 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 TMED4Q7Z7H5 227 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR10J5Q8NHC4 309 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 ATP6V0E2Q8NHE4 81 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 MCFD2Q8NI22 146 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 ADAT3Q96EY9 351 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 C2orf50Q96LR7 162 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 SCGB3A1Q96QR1 104 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 SIGMAR1Q99720 223 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 LINC00467Q9BRT7 94 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 TMEM138Q9NPI0 162 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 RPRMQ9NS64 109 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 CYSLTR1Q9Y271 337 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 HLA-DRB4X5D2U9 266 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 LRP2P98164 4655 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 FSIP2Q5CZC0 6907 aa1.06□□□□□ -2.24
HMGB1P27-201ENST00000431429 FAT4Q6V0I7 4981 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRGV2A0A075B6R0 118 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 A0A096LPF7 62 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 TMEM212A6NML5 194 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 H7BYZ3 331 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 GNGT2O14610 69 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 ATP5HO75947 161 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 SNAPC5O75971 98 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 HTR1AP08908 422 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 UBBP0CG47 229 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 SAA1P0DJI8 122 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 AKR1C3P42330 323 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 PRCDQ00LT1 54 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 INSL4Q14641 139 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 HMGN3Q15651 99 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 NDUFA5Q16718 116 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 Q6Q795 121 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 TOMM20LQ6UXN7 152 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 FP248Q71RG6 208 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR10K1Q8NGX5 313 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR5AK2Q8NH90 309 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 TMEM263Q8WUH6 116 aaKnown RBP1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 DNAJC9Q8WXX5 260 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 ANP32BQ92688 251 aaKnown RBP1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 TMEM203Q969S6 136 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 ZC2HC1AQ96GY0 325 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 LINC00052Q96N35 136 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 GINS4Q9BRT9 223 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 NOP10Q9NPE3 64 aaKnown RBP1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 ARMC1Q9NVT9 282 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 BET1LQ9NYM9 111 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 PRO0255Q9UI72 69 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 GNG8Q9UK08 70 aa1.05□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRAV1-1A0A0B4J248 108 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 CORTO00230 105 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 PMP2P02689 132 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 CRYGAP11844 174 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 SRIP30626 198 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 SNCAP37840 140 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 ZNF846Q147U1 533 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 ELOBQ15370 118 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 LINC01556Q5JQF7 62 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 GLIPR1L1Q6UWM5 242 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms