RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 SNCGO76070 127 aa10.92□□□□□ -0.66
LINC00839-202ENST00000429940 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
LINC00839-202ENST00000429940 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
LINC00839-202ENST00000429940 RBMY1BA6NDE4 496 aaKnown RBP10.91□□□□□ -0.66
LINC00839-202ENST00000429940 RBMY1EA6NEQ0 496 aaKnown RBP10.91□□□□□ -0.66
LINC00839-202ENST00000429940 COX6CP09669 75 aa10.91□□□□□ -0.66
LINC00839-202ENST00000429940 RBMY1DP0C7P1 496 aaKnown RBP10.91□□□□□ -0.66
LINC00839-202ENST00000429940 Q6ZSV7 163 aa10.91□□□□□ -0.66
LINC00839-202ENST00000429940 LINC00467Q9BRT7 94 aa10.91□□□□□ -0.66
LINC00839-202ENST00000429940 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
LINC00839-202ENST00000429940 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
LINC00839-202ENST00000429940 YAE1D1Q9NRH1 226 aa10.91□□□□□ -0.66
LINC00839-202ENST00000429940 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
LINC00839-202ENST00000429940 IGHV4-31P0DP07 118 aa10.9□□□□□ -0.66
LINC00839-202ENST00000429940 SLURP1P55000 103 aa10.9□□□□□ -0.66
LINC00839-202ENST00000429940 LINC01356Q8N9X3 169 aa10.9□□□□□ -0.66
LINC00839-202ENST00000429940 VPREB3Q9UKI3 123 aa10.9□□□□□ -0.66
LINC00839-202ENST00000429940 A8MTW9 85 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 H7C423 109 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 PIK3CD-AS1Q5SR53 167 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 NF1P21359 2839 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 BAHCC1Q9P281 2608 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 TRAV4A0A0B4J268 109 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 CRLF1O75462 422 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 DEFB136Q30KP8 78 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 ZNF702PQ9H963 129 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 NACAE9PAV3 2078 aa10.89□□□□□ -0.67
LINC00839-202ENST00000429940 CLEC2BQ92478 149 aa10.88□□□□□ -0.67
LINC00839-202ENST00000429940 SORL1Q92673 2214 aa10.88□□□□□ -0.67
LINC00839-202ENST00000429940 CDKN2A-AS1Q9UH64 79 aa10.88□□□□□ -0.67
LINC00839-202ENST00000429940 H3BT86 120 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 TIMM17BO60830 172 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 IGHV3-53P01767 116 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 C18orf65Q6ZTR6 163 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 DAND5Q8N907 189 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 DNAJC30Q96LL9 226 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 LINC01587Q99440 93 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 MTORP42345 2549 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 IFITM1P13164 125 aa10.87□□□□□ -0.67
LINC00839-202ENST00000429940 J3QLI3 93 aa10.86□□□□□ -0.67
LINC00839-202ENST00000429940 LST1O00453 97 aa10.86□□□□□ -0.67
LINC00839-202ENST00000429940 NDUFA1O15239 70 aa10.86□□□□□ -0.67
LINC00839-202ENST00000429940 C11orf72Q8NBR9 251 aa10.86□□□□□ -0.67
LINC00839-202ENST00000429940 DGAT2L7PQ6IED9 249 aa10.85□□□□□ -0.67
LINC00839-202ENST00000429940 TMEM101Q96IK0 257 aa10.85□□□□□ -0.67
LINC00839-202ENST00000429940 TIRAPP58753 221 aa10.84□□□□□ -0.67
LINC00839-202ENST00000429940 C15orf53Q8NAA6 179 aa10.84□□□□□ -0.67
LINC00839-202ENST00000429940 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
LINC00839-202ENST00000429940 NHLRC4P0CG21 123 aaPredicted RBP10.84□□□□□ -0.67
LINC00839-202ENST00000429940 NDUFV3P56181 108 aaKnown RBP10.84□□□□□ -0.67
LINC00839-202ENST00000429940 CIRBPQ14011 172 aaKnown RBP10.84□□□□□ -0.67
LINC00839-202ENST00000429940 Q6YL49 198 aa10.84□□□□□ -0.67
LINC00839-202ENST00000429940 MAP6D1Q9H9H5 199 aa10.84□□□□□ -0.67
LINC00839-202ENST00000429940 BEAN1Q3B7T3 259 aa10.83□□□□□ -0.68
LINC00839-202ENST00000429940 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.83□□□□□ -0.68
LINC00839-202ENST00000429940 HIVEP1P15822 2718 aa10.83□□□□□ -0.68
LINC00839-202ENST00000429940 RS1O15537 224 aa10.83□□□□□ -0.68
LINC00839-202ENST00000429940 COX6A2Q02221 97 aa10.83□□□□□ -0.68
LINC00839-202ENST00000429940 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
LINC00839-202ENST00000429940 PEMTQ9UBM1 199 aa10.83□□□□□ -0.68
LINC00839-202ENST00000429940 INSP01308 110 aa10.82□□□□□ -0.68
LINC00839-202ENST00000429940 GAGE5Q13069 117 aa10.82□□□□□ -0.68
LINC00839-202ENST00000429940 GAGE6Q13070 117 aa10.82□□□□□ -0.68
LINC00839-202ENST00000429940 Q6Q795 121 aa10.82□□□□□ -0.68
LINC00839-202ENST00000429940 SMR3AQ99954 134 aa10.82□□□□□ -0.68
LINC00839-202ENST00000429940 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
LINC00839-202ENST00000429940 DYNLRB2Q8TF09 96 aa10.81□□□□□ -0.68
LINC00839-202ENST00000429940 Q9H8V8 135 aa10.81□□□□□ -0.68
LINC00839-202ENST00000429940 IGHV3OR16-12A0A075B7B8 117 aa10.81□□□□□ -0.68
LINC00839-202ENST00000429940 HERVK_113P63121 156 aa10.81□□□□□ -0.68
LINC00839-202ENST00000429940 LINC00308Q8TCZ7 52 aa10.81□□□□□ -0.68
LINC00839-202ENST00000429940 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
LINC00839-202ENST00000429940 IGLV5-39A0A0G2JS06 123 aa10.79□□□□□ -0.68
LINC00839-202ENST00000429940 LINC00242Q5T6M2 205 aa10.79□□□□□ -0.68
LINC00839-202ENST00000429940 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
LINC00839-202ENST00000429940 DEFB121Q5J5C9 76 aa10.79□□□□□ -0.68
LINC00839-202ENST00000429940 KHDC1LQ5JSQ8 128 aa10.79□□□□□ -0.68
LINC00839-202ENST00000429940 B5MCH6 92 aa10.78□□□□□ -0.68
LINC00839-202ENST00000429940 FSHBP01225 129 aa10.78□□□□□ -0.68
LINC00839-202ENST00000429940 FAM240AA0A1B0GVK7 77 aa10.78□□□□□ -0.68
LINC00839-202ENST00000429940 LINC00694P0DN24 101 aa10.78□□□□□ -0.68
LINC00839-202ENST00000429940 KRTAP1-1Q07627 177 aa10.78□□□□□ -0.68
LINC00839-202ENST00000429940 MRPL23Q16540 153 aaKnown RBP10.78□□□□□ -0.68
LINC00839-202ENST00000429940 XCL2Q9UBD3 114 aa10.78□□□□□ -0.68
LINC00839-202ENST00000429940 SS18L2Q9UHA2 77 aa10.78□□□□□ -0.68
LINC00839-202ENST00000429940 NDUFA7O95182 113 aa10.77□□□□□ -0.69
LINC00839-202ENST00000429940 C4orf3Q8WVX3 66 aa10.77□□□□□ -0.69
LINC00839-202ENST00000429940 ANK3Q12955 4377 aaKnown RBP10.77□□□□□ -0.69
LINC00839-202ENST00000429940 DEFB114Q30KQ6 69 aa10.77□□□□□ -0.69
LINC00839-202ENST00000429940 SMIM1B2RUZ4 78 aa10.76□□□□□ -0.69
LINC00839-202ENST00000429940 NIPBLQ6KC79 2804 aaeCLIP10.76□□□□□ -0.69
LINC00839-202ENST00000429940 TRGV1A0A0A0MS02 117 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 TRAV13-1A0A0B4J241 112 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 COX7A2LO14548 114 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 GAGE7O76087 117 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms