RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TMEM170BQ5T4T1 132 aa18.67■□□□□ 0.58
SH3GL3-202ENST00000427482 MAPKAPK5-AS1Q8N8E1 139 aa18.67■□□□□ 0.58
SH3GL3-202ENST00000427482 TMEM243Q9BU79 118 aa18.67■□□□□ 0.58
SH3GL3-202ENST00000427482 DNAH3Q8TD57 4116 aa18.67■□□□□ 0.58
SH3GL3-202ENST00000427482 SPART-AS1P0CW21 52 aa18.67■□□□□ 0.58
SH3GL3-202ENST00000427482 CSDC2Q9Y534 153 aaKnown RBP18.67■□□□□ 0.58
SH3GL3-202ENST00000427482 GYPEP15421 78 aa18.66■□□□□ 0.58
SH3GL3-202ENST00000427482 DGAT2L7PQ6IED9 249 aa18.66■□□□□ 0.58
SH3GL3-202ENST00000427482 TRBV25-1A0A075B6N4 114 aa18.65■□□□□ 0.58
SH3GL3-202ENST00000427482 SMAGPQ0VAQ4 97 aa18.65■□□□□ 0.58
SH3GL3-202ENST00000427482 HIGD1BQ9P298 99 aa18.65■□□□□ 0.58
SH3GL3-202ENST00000427482 ZNF22P17026 224 aaPredicted RBP18.64■□□□□ 0.57
SH3GL3-202ENST00000427482 BVES-AS1Q5T3Y7 98 aa18.64■□□□□ 0.57
SH3GL3-202ENST00000427482 COL5A1-AS1Q5SY13 56 aa18.63■□□□□ 0.57
SH3GL3-202ENST00000427482 H7C423 109 aa18.63■□□□□ 0.57
SH3GL3-202ENST00000427482 TRBV6-8A0A0A6YYG3 113 aa18.62■□□□□ 0.57
SH3GL3-202ENST00000427482 A0A1B0GV90 55 aa18.62■□□□□ 0.57
SH3GL3-202ENST00000427482 UBE2L6O14933 153 aa18.62■□□□□ 0.57
SH3GL3-202ENST00000427482 ATP5G1P05496 136 aa18.62■□□□□ 0.57
SH3GL3-202ENST00000427482 RETNQ9HD89 108 aa18.62■□□□□ 0.57
SH3GL3-202ENST00000427482 TMEM223A0PJW6 202 aa18.61■□□□□ 0.57
SH3GL3-202ENST00000427482 PAX4O43316 350 aa18.61■□□□□ 0.57
SH3GL3-202ENST00000427482 MYMXA0A1B0GTQ4 84 aa18.6■□□□□ 0.57
SH3GL3-202ENST00000427482 UBE2D1P51668 147 aa18.6■□□□□ 0.57
SH3GL3-202ENST00000427482 ATP6V0E2Q8NHE4 81 aa18.6■□□□□ 0.57
SH3GL3-202ENST00000427482 TINCRA0A1B0GVN0 87 aa18.6■□□□□ 0.57
SH3GL3-202ENST00000427482 HSD52Q0P140 79 aa18.6■□□□□ 0.57
SH3GL3-202ENST00000427482 ANK2Q01484 3957 aa18.6■□□□□ 0.57
SH3GL3-202ENST00000427482 TEX48A0A1B0GUV7 120 aa18.59■□□□□ 0.57
SH3GL3-202ENST00000427482 OR5A1Q8NGJ0 315 aa18.59■□□□□ 0.57
SH3GL3-202ENST00000427482 AMMECR1LQ6DCA0 310 aa18.58■□□□□ 0.57
SH3GL3-202ENST00000427482 VSIG2Q96IQ7 327 aa18.58■□□□□ 0.57
SH3GL3-202ENST00000427482 CDC42SE2Q9NRR3 84 aa18.58■□□□□ 0.56
SH3GL3-202ENST00000427482 ZNF25P17030 456 aaPredicted RBP18.56■□□□□ 0.56
SH3GL3-202ENST00000427482 TSPEAR-AS2P59090 65 aa18.56■□□□□ 0.56
SH3GL3-202ENST00000427482 TMEM101Q96IK0 257 aa18.56■□□□□ 0.56
SH3GL3-202ENST00000427482 ZNF815PA8K554 130 aa18.55■□□□□ 0.56
SH3GL3-202ENST00000427482 A0A0J9YY99 117 aa18.54■□□□□ 0.56
SH3GL3-202ENST00000427482 LEPROTO15243 131 aa18.54■□□□□ 0.56
SH3GL3-202ENST00000427482 GAGE6Q13070 117 aa18.54■□□□□ 0.56
SH3GL3-202ENST00000427482 F5H768 121 aa18.53■□□□□ 0.56
SH3GL3-202ENST00000427482 CHCHD5Q9BSY4 110 aa18.53■□□□□ 0.56
SH3GL3-202ENST00000427482 J3QQQ9 107 aa18.53■□□□□ 0.56
SH3GL3-202ENST00000427482 TIRAPP58753 221 aa18.53■□□□□ 0.56
SH3GL3-202ENST00000427482 FAM19A3Q7Z5A8 133 aa18.53■□□□□ 0.56
SH3GL3-202ENST00000427482 TRAV26-1A0A087WT03 109 aa18.52■□□□□ 0.56
SH3GL3-202ENST00000427482 C11orf68Q9H3H3 251 aaKnown RBP18.52■□□□□ 0.56
SH3GL3-202ENST00000427482 GEMIN7Q9H840 131 aaKnown RBP18.52■□□□□ 0.56
SH3GL3-202ENST00000427482 IGLV5-45A0A087WSX0 123 aa18.51■□□□□ 0.55
SH3GL3-202ENST00000427482 HTN3P15516 51 aa18.51■□□□□ 0.55
SH3GL3-202ENST00000427482 C12orf74Q32Q52 190 aa18.51■□□□□ 0.55
SH3GL3-202ENST00000427482 ORAOV1Q8WV07 137 aa18.51■□□□□ 0.55
SH3GL3-202ENST00000427482 SEC11AP67812 179 aa18.5■□□□□ 0.55
SH3GL3-202ENST00000427482 LINC00469Q8N7U9 141 aa18.5■□□□□ 0.55
SH3GL3-202ENST00000427482 MDFIQ99750 246 aa18.5■□□□□ 0.55
SH3GL3-202ENST00000427482 IGHV3-64A0A075B6Q5 118 aa18.49■□□□□ 0.55
SH3GL3-202ENST00000427482 A0A096LPF7 62 aa18.49■□□□□ 0.55
SH3GL3-202ENST00000427482 LGALS3P17931 250 aaKnown RBP18.49■□□□□ 0.55
SH3GL3-202ENST00000427482 PLEKHB2Q96CS7 222 aa18.49■□□□□ 0.55
SH3GL3-202ENST00000427482 LINC00242Q5T6M2 205 aa18.49■□□□□ 0.55
SH3GL3-202ENST00000427482 HERVK_113P63121 156 aa18.47■□□□□ 0.55
SH3GL3-202ENST00000427482 TAL2Q16559 108 aa18.47■□□□□ 0.55
SH3GL3-202ENST00000427482 IGLV4-60A0A075B6I1 120 aa18.46■□□□□ 0.55
SH3GL3-202ENST00000427482 TRAV13-1A0A0B4J241 112 aa18.46■□□□□ 0.55
SH3GL3-202ENST00000427482 COX6A2Q02221 97 aa18.46■□□□□ 0.55
SH3GL3-202ENST00000427482 CDKN2A-AS1Q9UH64 79 aa18.46■□□□□ 0.55
SH3GL3-202ENST00000427482 IGHV1-58A0A0C4DH39 117 aa18.46■□□□□ 0.55
SH3GL3-202ENST00000427482 PRB2P02812 416 aaPredicted RBP18.46■□□□□ 0.55
SH3GL3-202ENST00000427482 IGHV3-30-3P0DP02 117 aa18.46■□□□□ 0.55
SH3GL3-202ENST00000427482 TRAV8-3A0A0A6YYJ7 113 aa18.45■□□□□ 0.54
SH3GL3-202ENST00000427482 SCGB1D4Q6XE38 83 aa18.45■□□□□ 0.54
SH3GL3-202ENST00000427482 H3BRM9 83 aa18.44■□□□□ 0.54
SH3GL3-202ENST00000427482 MRPL23Q16540 153 aaKnown RBP18.44■□□□□ 0.54
SH3GL3-202ENST00000427482 KPRPQ5T749 579 aaPredicted RBP18.44■□□□□ 0.54
SH3GL3-202ENST00000427482 K7EIL1 84 aa18.44■□□□□ 0.54
SH3GL3-202ENST00000427482 SPINK8P0C7L1 97 aa18.44■□□□□ 0.54
SH3GL3-202ENST00000427482 GCSHP23434 173 aa18.44■□□□□ 0.54
SH3GL3-202ENST00000427482 CEND1Q8N111 149 aa18.43■□□□□ 0.54
SH3GL3-202ENST00000427482 TM2D2Q9BX73 214 aa18.42■□□□□ 0.54
SH3GL3-202ENST00000427482 ICOSQ9Y6W8 199 aa18.42■□□□□ 0.54
SH3GL3-202ENST00000427482 NOTCH1P46531 2555 aa18.42■□□□□ 0.54
SH3GL3-202ENST00000427482 A6NDN8 102 aa18.42■□□□□ 0.54
SH3GL3-202ENST00000427482 HIST1H4GQ99525 98 aa18.42■□□□□ 0.54
SH3GL3-202ENST00000427482 FXYD2P54710 66 aa18.41■□□□□ 0.54
SH3GL3-202ENST00000427482 SH2D6Q7Z4S9 175 aa18.41■□□□□ 0.54
SH3GL3-202ENST00000427482 A0A0J9YWU9 116 aa18.4■□□□□ 0.54
SH3GL3-202ENST00000427482 A0A1B0GUV1 79 aa18.4■□□□□ 0.54
SH3GL3-202ENST00000427482 TAX1BP3O14907 124 aa18.4■□□□□ 0.54
SH3GL3-202ENST00000427482 Q6ZVH6 145 aa18.39■□□□□ 0.53
SH3GL3-202ENST00000427482 TMEM262E9PQX1 116 aa18.38■□□□□ 0.53
SH3GL3-202ENST00000427482 RBX1P62877 108 aa18.38■□□□□ 0.53
SH3GL3-202ENST00000427482 COX11Q9Y6N1 276 aa18.38■□□□□ 0.53
SH3GL3-202ENST00000427482 Q6ZTC4 211 aa18.37■□□□□ 0.53
SH3GL3-202ENST00000427482 SPATA25Q9BR10 227 aa18.37■□□□□ 0.53
SH3GL3-202ENST00000427482 K7EP13 123 aa18.37■□□□□ 0.53
SH3GL3-202ENST00000427482 TM2D3Q9BRN9 247 aa18.36■□□□□ 0.53
SH3GL3-202ENST00000427482 IGLV5-39A0A0G2JS06 123 aa18.35■□□□□ 0.53
SH3GL3-202ENST00000427482 LURAP1LQ8IV03 231 aa18.35■□□□□ 0.53
SH3GL3-202ENST00000427482 SPANXB1Q9NS25 103 aaPredicted RBP18.35■□□□□ 0.53
SH3GL3-202ENST00000427482 TENM3Q9P273 2699 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms