RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 AP5S1Q9NUS5 200 aa10.5□□□□□ -0.73
COL11A1-204ENST00000427239 VPS13DQ5THJ4 4388 aa10.5□□□□□ -0.73
COL11A1-204ENST00000427239 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
COL11A1-204ENST00000427239 NUPR1O60356 82 aa10.5□□□□□ -0.73
COL11A1-204ENST00000427239 PCP4P48539 62 aa10.5□□□□□ -0.73
COL11A1-204ENST00000427239 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
COL11A1-204ENST00000427239 BAGE3Q86Y29 109 aa10.5□□□□□ -0.73
COL11A1-204ENST00000427239 DNAH1Q9P2D7 4330 aa10.49□□□□□ -0.73
COL11A1-204ENST00000427239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-204ENST00000427239 LCE6AA0A183 80 aa10.49□□□□□ -0.73
COL11A1-204ENST00000427239 IGKV2-29A2NJV5 120 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-204ENST00000427239 GAGE6Q13070 117 aa10.49□□□□□ -0.73
COL11A1-204ENST00000427239 PAM16Q9Y3D7 125 aa10.49□□□□□ -0.73
COL11A1-204ENST00000427239 LINC01549A6NIU2 74 aa10.48□□□□□ -0.73
COL11A1-204ENST00000427239 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
COL11A1-204ENST00000427239 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
COL11A1-204ENST00000427239 SERF1AO75920 110 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 FGF6P10767 208 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 C10orf126Q8N4M7 172 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 URB1-AS1Q96HZ7 61 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 RBX1P62877 108 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 TIMM21Q9BVV7 248 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
COL11A1-204ENST00000427239 CSDC2Q9Y534 153 aaKnown RBP10.47□□□□□ -0.73
COL11A1-204ENST00000427239 IGHV3-30P01768 117 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 IGHV3-33P01772 117 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 IGHV3-30-3P0DP02 117 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 IGHV3-30-5P0DP03 117 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 LINC00310P59036 64 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 BATFQ16520 125 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 C21orf62-AS1Q17RA5 79 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.74
COL11A1-204ENST00000427239 C2orf66Q6UXQ4 117 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 TMEM101Q96IK0 257 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 CYSLTR1Q9Y271 337 aa10.46□□□□□ -0.74
COL11A1-204ENST00000427239 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
COL11A1-204ENST00000427239 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
COL11A1-204ENST00000427239 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
COL11A1-204ENST00000427239 Q8N976 141 aa10.45□□□□□ -0.74
COL11A1-204ENST00000427239 ORAOV1Q8WV07 137 aa10.45□□□□□ -0.74
COL11A1-204ENST00000427239 UBE2D4Q9Y2X8 147 aa10.45□□□□□ -0.74
COL11A1-204ENST00000427239 TOMM6Q96B49 74 aa10.44□□□□□ -0.74
COL11A1-204ENST00000427239 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
COL11A1-204ENST00000427239 PYGO1Q9Y3Y4 419 aa10.44□□□□□ -0.74
COL11A1-204ENST00000427239 ANGP03950 147 aaKnown RBP10.44□□□□□ -0.74
COL11A1-204ENST00000427239 SPATA45Q537H7 98 aa10.44□□□□□ -0.74
COL11A1-204ENST00000427239 Q8N3U1 123 aa10.44□□□□□ -0.74
COL11A1-204ENST00000427239 OR5A1Q8NGJ0 315 aa10.44□□□□□ -0.74
COL11A1-204ENST00000427239 ALMS1Q8TCU4 4167 aa10.43□□□□□ -0.74
COL11A1-204ENST00000427239 C20orf202A1L168 122 aa10.43□□□□□ -0.74
COL11A1-204ENST00000427239 HSBP1O75506 76 aa10.43□□□□□ -0.74
COL11A1-204ENST00000427239 KMT2AQ03164 3969 aa10.43□□□□□ -0.74
COL11A1-204ENST00000427239 KMT2CQ8NEZ4 4911 aaKnown RBP10.42□□□□□ -0.74
COL11A1-204ENST00000427239 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
COL11A1-204ENST00000427239 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
COL11A1-204ENST00000427239 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
COL11A1-204ENST00000427239 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
COL11A1-204ENST00000427239 KLK12Q9UKR0 248 aa10.42□□□□□ -0.74
COL11A1-204ENST00000427239 HBDP02042 147 aa10.41□□□□□ -0.74
COL11A1-204ENST00000427239 KRTDAPP60985 99 aa10.41□□□□□ -0.74
COL11A1-204ENST00000427239 Q6ZR54 194 aa10.41□□□□□ -0.74
COL11A1-204ENST00000427239 ERASQ7Z444 233 aa10.41□□□□□ -0.74
COL11A1-204ENST00000427239 IGLC3P0DOY3 106 aa10.41□□□□□ -0.74
COL11A1-204ENST00000427239 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
COL11A1-204ENST00000427239 LINC00269Q8N2A0 174 aa10.41□□□□□ -0.74
COL11A1-204ENST00000427239 TRAV8-3A0A0A6YYJ7 113 aa10.4□□□□□ -0.74
COL11A1-204ENST00000427239 IGIPA6NJ69 53 aa10.4□□□□□ -0.74
COL11A1-204ENST00000427239 M0R2N4 97 aa10.4□□□□□ -0.74
COL11A1-204ENST00000427239 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
COL11A1-204ENST00000427239 TIMM17AQ99595 171 aa10.4□□□□□ -0.74
COL11A1-204ENST00000427239 KRTAP1-5Q9BYS1 174 aa10.4□□□□□ -0.74
COL11A1-204ENST00000427239 PRR34Q9NV39 138 aa10.4□□□□□ -0.74
COL11A1-204ENST00000427239 A0A096LNJ9 63 aa10.39□□□□□ -0.75
COL11A1-204ENST00000427239 PTTG1IPP53801 180 aa10.39□□□□□ -0.75
COL11A1-204ENST00000427239 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
COL11A1-204ENST00000427239 Q6ZN92 141 aa10.39□□□□□ -0.75
COL11A1-204ENST00000427239 TMEM141Q96I45 108 aa10.39□□□□□ -0.75
COL11A1-204ENST00000427239 SACSQ9NZJ4 4579 aa10.39□□□□□ -0.75
COL11A1-204ENST00000427239 CRPP02741 224 aa10.38□□□□□ -0.75
COL11A1-204ENST00000427239 REG3AQ06141 175 aa10.38□□□□□ -0.75
COL11A1-204ENST00000427239 PMCHL1Q16048 86 aa10.38□□□□□ -0.75
COL11A1-204ENST00000427239 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
COL11A1-204ENST00000427239 UBE2WQ96B02 151 aa10.38□□□□□ -0.75
COL11A1-204ENST00000427239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-204ENST00000427239 MIAQ16674 131 aa10.37□□□□□ -0.75
COL11A1-204ENST00000427239 FAM19A2Q8N3H0 131 aa10.37□□□□□ -0.75
COL11A1-204ENST00000427239 STPG4Q8N801 248 aa10.37□□□□□ -0.75
COL11A1-204ENST00000427239 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
COL11A1-204ENST00000427239 IGLV4-3A0A075B6K6 122 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 TRAV8-4A0A0B4J246 113 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 UBE2V1Q13404 147 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
COL11A1-204ENST00000427239 VCX2Q9H322 139 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 CCL25O15444 150 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 ATP5LO75964 103 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 Q6ZUT4 128 aa10.36□□□□□ -0.75
COL11A1-204ENST00000427239 COX11Q9Y6N1 276 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms