RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ENHOQ6UWT2 76 aa9.02□□□□□ -0.97
SNX3-204ENST00000426155 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 IGHV1-24A0A0C4DH33 117 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 MT-ND6P03923 174 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 RBX1P62877 108 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 TMEM97Q5BJF2 176 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 BORCS7Q96B45 105 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
SNX3-204ENST00000426155 A0A1B0GUT8 65 aa9□□□□□ -0.97
SNX3-204ENST00000426155 CRPP02741 224 aa9□□□□□ -0.97
SNX3-204ENST00000426155 ESDP10768 282 aa9□□□□□ -0.97
SNX3-204ENST00000426155 SMIM15Q7Z3B0 74 aa9□□□□□ -0.97
SNX3-204ENST00000426155 NUP35Q8NFH5 326 aa9□□□□□ -0.97
SNX3-204ENST00000426155 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
SNX3-204ENST00000426155 HAMPP81172 84 aa8.99□□□□□ -0.97
SNX3-204ENST00000426155 RMI2Q96E14 147 aa8.99□□□□□ -0.97
SNX3-204ENST00000426155 RNF185Q96GF1 192 aa8.99□□□□□ -0.97
SNX3-204ENST00000426155 TMEM243Q9BU79 118 aa8.99□□□□□ -0.97
SNX3-204ENST00000426155 FAT1Q14517 4588 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 FAM231BA6NCW3 169 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 GCSHP23434 173 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 AMTP48728 403 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 Q0VG73 95 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 LINC00269Q8N2A0 174 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 C20orf203Q8NBC4 194 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
SNX3-204ENST00000426155 IGLV4-60A0A075B6I1 120 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 SDHAF1A6NFY7 115 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 NCR2O95944 276 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 COTL1Q14019 142 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 MIEN1Q9BRT3 115 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 C1orf43Q9BWL3 253 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 GNB1LQ9BYB4 327 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 NAT8BQ9UHF3 227 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 COX11Q9Y6N1 276 aa8.97□□□□□ -0.97
SNX3-204ENST00000426155 HLA-DQA1P01909 254 aa8.96□□□□□ -0.98
SNX3-204ENST00000426155 XGP55808 180 aa8.96□□□□□ -0.98
SNX3-204ENST00000426155 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
SNX3-204ENST00000426155 NTN5Q8WTR8 489 aaPredicted RBP8.96□□□□□ -0.98
SNX3-204ENST00000426155 VAMP8Q9BV40 100 aa8.96□□□□□ -0.98
SNX3-204ENST00000426155 MRPL18Q9H0U6 180 aaKnown RBP8.96□□□□□ -0.98
SNX3-204ENST00000426155 PRR34Q9NV39 138 aa8.96□□□□□ -0.98
SNX3-204ENST00000426155 IGLV10-54A0A075B6I4 117 aa8.95□□□□□ -0.98
SNX3-204ENST00000426155 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
SNX3-204ENST00000426155 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
SNX3-204ENST00000426155 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
SNX3-204ENST00000426155 RIGQ13278 110 aa8.95□□□□□ -0.98
SNX3-204ENST00000426155 LINC01620Q4KN68 170 aa8.95□□□□□ -0.98
SNX3-204ENST00000426155 TEX43Q6ZNM6 134 aa8.95□□□□□ -0.98
SNX3-204ENST00000426155 UBE2L6O14933 153 aa8.94□□□□□ -0.98
SNX3-204ENST00000426155 CAMPP49913 170 aa8.94□□□□□ -0.98
SNX3-204ENST00000426155 REG3AQ06141 175 aa8.94□□□□□ -0.98
SNX3-204ENST00000426155 MIAQ16674 131 aa8.94□□□□□ -0.98
SNX3-204ENST00000426155 SNHG12Q9BXW3 62 aa8.94□□□□□ -0.98
SNX3-204ENST00000426155 TRBV6-5A0A0K0K1A5 114 aa8.93□□□□□ -0.98
SNX3-204ENST00000426155 APCSP02743 223 aa8.93□□□□□ -0.98
SNX3-204ENST00000426155 LINC00614P0C842 121 aa8.93□□□□□ -0.98
SNX3-204ENST00000426155 MRPL54Q6P161 138 aaKnown RBP8.93□□□□□ -0.98
SNX3-204ENST00000426155 KRTAP26-1Q6PEX3 210 aa8.93□□□□□ -0.98
SNX3-204ENST00000426155 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
SNX3-204ENST00000426155 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
SNX3-204ENST00000426155 CBY1Q9Y3M2 126 aa8.93□□□□□ -0.98
SNX3-204ENST00000426155 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
SNX3-204ENST00000426155 TSHBP01222 138 aa8.92□□□□□ -0.98
SNX3-204ENST00000426155 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
SNX3-204ENST00000426155 COL5A1-AS1Q5SY13 56 aa8.92□□□□□ -0.98
SNX3-204ENST00000426155 Q8N1X5 172 aa8.92□□□□□ -0.98
SNX3-204ENST00000426155 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
SNX3-204ENST00000426155 TMEM70Q9BUB7 260 aa8.92□□□□□ -0.98
SNX3-204ENST00000426155 IGKV3OR2-268A0A0C4DH90 116 aa8.91□□□□□ -0.98
SNX3-204ENST00000426155 C20orf202A1L168 122 aa8.91□□□□□ -0.98
SNX3-204ENST00000426155 USP17L23D6RBM5 183 aa8.91□□□□□ -0.98
SNX3-204ENST00000426155 I3L3M4 83 aa8.91□□□□□ -0.98
SNX3-204ENST00000426155 PMCHP20382 165 aa8.91□□□□□ -0.98
SNX3-204ENST00000426155 MRPL51Q4U2R6 128 aaKnown RBP8.91□□□□□ -0.98
SNX3-204ENST00000426155 NRACQ8N912 160 aa8.91□□□□□ -0.98
SNX3-204ENST00000426155 DLEU1O43261 78 aa8.9□□□□□ -0.98
SNX3-204ENST00000426155 SERF1AO75920 110 aa8.9□□□□□ -0.98
SNX3-204ENST00000426155 POLR2KP53803 58 aaKnown RBP8.9□□□□□ -0.98
SNX3-204ENST00000426155 PMCHL1Q16048 86 aa8.9□□□□□ -0.98
SNX3-204ENST00000426155 FAM104BQ5XKR9 115 aa8.9□□□□□ -0.98
SNX3-204ENST00000426155 UQCR10Q9UDW1 63 aa8.9□□□□□ -0.98
SNX3-204ENST00000426155 A0A1B0GXF2 115 aa8.89□□□□□ -0.99
SNX3-204ENST00000426155 SMR3BP02814 79 aaPredicted RBP8.89□□□□□ -0.99
SNX3-204ENST00000426155 FGF6P10767 208 aa8.89□□□□□ -0.99
SNX3-204ENST00000426155 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
SNX3-204ENST00000426155 RNASEKQ6P5S7 137 aaKnown RBP8.89□□□□□ -0.99
SNX3-204ENST00000426155 TRBV27A0A0K0K1C4 114 aa8.88□□□□□ -0.99
SNX3-204ENST00000426155 PRSS1P07477 247 aa8.88□□□□□ -0.99
SNX3-204ENST00000426155 G0S2P27469 103 aa8.88□□□□□ -0.99
SNX3-204ENST00000426155 HBBP68871 147 aa8.88□□□□□ -0.99
SNX3-204ENST00000426155 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
SNX3-204ENST00000426155 SUMO2P61956 95 aaKnown RBP8.87□□□□□ -0.99
SNX3-204ENST00000426155 TRAV8-4A0A0B4J246 113 aa8.86□□□□□ -0.99
SNX3-204ENST00000426155 A0A1B0GW15 77 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms