RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 PF4P02776 101 aa8.3□□□□□ -1.08
UBR4-207ENST00000425413 TSPAN13O95857 204 aa8.3□□□□□ -1.08
UBR4-207ENST00000425413 IGLV1-51P01701 117 aa8.3□□□□□ -1.08
UBR4-207ENST00000425413 INSL3P51460 131 aa8.3□□□□□ -1.08
UBR4-207ENST00000425413 LOC100131303A0A0U1RQF7 123 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 LINC00694P0DN24 101 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 SLC25A29Q8N8R3 303 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 SPATA3Q8NHX4 192 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 INAFM1C9JVW0 142 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 LEPROTO15243 131 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 NPC2P61916 151 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
UBR4-207ENST00000425413 TIMM21Q9BVV7 248 aa8.29□□□□□ -1.08
UBR4-207ENST00000425413 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 C10orf126Q8N4M7 172 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 C19orf73Q9NVV2 129 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 PYGO1Q9Y3Y4 419 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 J3QR89 54 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 PRSS2P07478 247 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 UBE2D1P51668 147 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 NDUFA11Q86Y39 141 aa8.28□□□□□ -1.08
UBR4-207ENST00000425413 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
UBR4-207ENST00000425413 IGHV3-30P01768 117 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 IGHV3-30-5P0DP03 117 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 SMAGPQ0VAQ4 97 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 PIK3CD-AS1Q5SR53 167 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 TRAV13-1A0A0B4J241 112 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 K7EQD1 137 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 CFC1BP0CG36 223 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 CFC1P0CG37 223 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
UBR4-207ENST00000425413 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
UBR4-207ENST00000425413 PTH2Q96A98 100 aa8.27□□□□□ -1.09
UBR4-207ENST00000425413 MRPS36P82909 103 aaKnown RBP8.26□□□□□ -1.09
UBR4-207ENST00000425413 CLUHP3Q96NS8 147 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 SPANXA1Q9NS26 97 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 DEFB130BP0DP73 79 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 DEFB130AP0DP74 79 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 NTM-AS1Q6ZSK4 140 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 DNAJC30Q96LL9 226 aa8.26□□□□□ -1.09
UBR4-207ENST00000425413 A4D1N5 150 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 MUSTN1Q8IVN3 82 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.25□□□□□ -1.09
UBR4-207ENST00000425413 IL17DQ8TAD2 202 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 PLAC8L1A1L4L8 177 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 GAGE12HA6NDE8 117 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 COX6A2Q02221 97 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 A0A0J9YXY3 114 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 DAND5Q8N907 189 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 ZNF625Q96I27 306 aaPredicted RBP8.25□□□□□ -1.09
UBR4-207ENST00000425413 NDUFA12Q9UI09 145 aa8.25□□□□□ -1.09
UBR4-207ENST00000425413 TRAV4A0A0B4J268 109 aa8.24□□□□□ -1.09
UBR4-207ENST00000425413 LINC00482Q8N8I6 264 aa8.24□□□□□ -1.09
UBR4-207ENST00000425413 SIGMAR1Q99720 223 aa8.24□□□□□ -1.09
UBR4-207ENST00000425413 TMEM238C9JI98 176 aa8.24□□□□□ -1.09
UBR4-207ENST00000425413 TCL1BO95988 128 aa8.24□□□□□ -1.09
UBR4-207ENST00000425413 SMCPP49901 116 aaPredicted RBP8.24□□□□□ -1.09
UBR4-207ENST00000425413 Q1RN00 199 aa8.24□□□□□ -1.09
UBR4-207ENST00000425413 PRO1854Q9UHT4 67 aa8.24□□□□□ -1.09
UBR4-207ENST00000425413 C16orf74Q96GX8 76 aa8.23□□□□□ -1.09
UBR4-207ENST00000425413 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
UBR4-207ENST00000425413 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
UBR4-207ENST00000425413 CSNK1G2-AS1Q8NCQ2 148 aa8.23□□□□□ -1.09
UBR4-207ENST00000425413 CRLF1O75462 422 aa8.22□□□□□ -1.09
UBR4-207ENST00000425413 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
UBR4-207ENST00000425413 VSIG2Q96IQ7 327 aa8.22□□□□□ -1.09
UBR4-207ENST00000425413 TEP1Q99973 2627 aaKnown RBP8.22□□□□□ -1.09
UBR4-207ENST00000425413 DEFB4AO15263 64 aa8.22□□□□□ -1.09
UBR4-207ENST00000425413 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
UBR4-207ENST00000425413 UBE2D3P61077 147 aa8.22□□□□□ -1.09
UBR4-207ENST00000425413 UBE2D2P62837 147 aa8.22□□□□□ -1.09
UBR4-207ENST00000425413 DAZ2Q13117 558 aaKnown RBP8.22□□□□□ -1.09
UBR4-207ENST00000425413 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
UBR4-207ENST00000425413 TRRAPQ9Y4A5 3859 aa8.21□□□□□ -1.09
UBR4-207ENST00000425413 CMC4P56277 68 aaPredicted RBP8.21□□□□□ -1.09
UBR4-207ENST00000425413 LYRM7Q5U5X0 104 aa8.21□□□□□ -1.09
UBR4-207ENST00000425413 UBE2L6O14933 153 aa8.21□□□□□ -1.1
UBR4-207ENST00000425413 GAGE6Q13070 117 aa8.21□□□□□ -1.1
UBR4-207ENST00000425413 FOXI1Q12951 378 aa8.2□□□□□ -1.1
UBR4-207ENST00000425413 LINC00242Q5T6M2 205 aa8.2□□□□□ -1.1
UBR4-207ENST00000425413 A0A096LPF7 62 aa8.2□□□□□ -1.1
UBR4-207ENST00000425413 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
UBR4-207ENST00000425413 DAZ4Q86SG3 579 aaKnown RBP8.2□□□□□ -1.1
UBR4-207ENST00000425413 TMEM101Q96IK0 257 aa8.2□□□□□ -1.1
UBR4-207ENST00000425413 DAZ3Q9NR90 486 aaKnown RBP8.2□□□□□ -1.1
UBR4-207ENST00000425413 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
UBR4-207ENST00000425413 F8P00451 2351 aa8.2□□□□□ -1.1
UBR4-207ENST00000425413 CRYBA4P53673 196 aa8.19□□□□□ -1.1
UBR4-207ENST00000425413 LITAFQ99732 161 aa8.19□□□□□ -1.1
UBR4-207ENST00000425413 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
UBR4-207ENST00000425413 C9JAW5 83 aa8.18□□□□□ -1.1
UBR4-207ENST00000425413 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
UBR4-207ENST00000425413 CHCHD5Q9BSY4 110 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms