RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 IFITM10A6NMD0 228 aa7.13□□□□□ -1.27
MDC1-205ENST00000425072 FGF6P10767 208 aa7.13□□□□□ -1.27
MDC1-205ENST00000425072 MRPS36P82909 103 aaKnown RBP7.13□□□□□ -1.27
MDC1-205ENST00000425072 PET117Q6UWS5 81 aa7.13□□□□□ -1.27
MDC1-205ENST00000425072 OR5A1Q8NGJ0 315 aa7.13□□□□□ -1.27
MDC1-205ENST00000425072 WWC2-AS2Q96NR7 200 aa7.13□□□□□ -1.27
MDC1-205ENST00000425072 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
MDC1-205ENST00000425072 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
MDC1-205ENST00000425072 LOC105371267A0A1B0GV96 52 aa7.12□□□□□ -1.27
MDC1-205ENST00000425072 C20orf202A1L168 122 aa7.12□□□□□ -1.27
MDC1-205ENST00000425072 SYS1-DBNDD2H3BUS1 97 aa7.12□□□□□ -1.27
MDC1-205ENST00000425072 C3orf79P0CE67 100 aa7.12□□□□□ -1.27
MDC1-205ENST00000425072 KRTDAPP60985 99 aa7.12□□□□□ -1.27
MDC1-205ENST00000425072 GAGE6Q13070 117 aa7.12□□□□□ -1.27
MDC1-205ENST00000425072 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
MDC1-205ENST00000425072 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 TRAV12-1A0A0B4J245 112 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 PMVKQ15126 192 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 TEX43Q6ZNM6 134 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 ZNF664Q8N3J9 261 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 MUC7Q8TAX7 377 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 CDC42SE2Q9NRR3 84 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 APLNQ9ULZ1 77 aa7.11□□□□□ -1.27
MDC1-205ENST00000425072 CCL25O15444 150 aa7.1□□□□□ -1.27
MDC1-205ENST00000425072 SCGB1D1O95968 90 aa7.1□□□□□ -1.27
MDC1-205ENST00000425072 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
MDC1-205ENST00000425072 C2orf88Q9BSF0 95 aa7.1□□□□□ -1.27
MDC1-205ENST00000425072 CST9LQ9H4G1 147 aa7.1□□□□□ -1.27
MDC1-205ENST00000425072 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 TRAV9-2A0A087WT02 112 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 PRSS29PA6NIE9 313 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 RBX1P62877 108 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 SEC11AP67812 179 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 JOSD1Q15040 202 aaPredicted RBP7.09□□□□□ -1.27
MDC1-205ENST00000425072 LGALS9CQ6DKI2 356 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 BAALCQ8WXS3 180 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 AMELXQ99217 191 aa7.09□□□□□ -1.27
MDC1-205ENST00000425072 MRPS16Q9Y3D3 137 aaKnown RBP7.09□□□□□ -1.27
MDC1-205ENST00000425072 K7EP13 123 aa7.08□□□□□ -1.28
MDC1-205ENST00000425072 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
MDC1-205ENST00000425072 CHTOPQ9Y3Y2 248 aaKnown RBP7.08□□□□□ -1.28
MDC1-205ENST00000425072 H0Y8G0 127 aa7.07□□□□□ -1.28
MDC1-205ENST00000425072 C3orf84H3BNL1 204 aa7.07□□□□□ -1.28
MDC1-205ENST00000425072 SIVA1O15304 175 aa7.07□□□□□ -1.28
MDC1-205ENST00000425072 LINC01545Q5VT33 79 aa7.07□□□□□ -1.28
MDC1-205ENST00000425072 UBE2DNLQ8IWF7 75 aa7.07□□□□□ -1.28
MDC1-205ENST00000425072 UPK3BQ9BT76 320 aa7.07□□□□□ -1.28
MDC1-205ENST00000425072 LINC00588Q9Y4M8 146 aa7.07□□□□□ -1.28
MDC1-205ENST00000425072 F8VRH5 84 aa7.06□□□□□ -1.28
MDC1-205ENST00000425072 ANGP03950 147 aaKnown RBP7.06□□□□□ -1.28
MDC1-205ENST00000425072 PLNP26678 52 aa7.06□□□□□ -1.28
MDC1-205ENST00000425072 SS18Q15532 418 aa7.06□□□□□ -1.28
MDC1-205ENST00000425072 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
MDC1-205ENST00000425072 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
MDC1-205ENST00000425072 ZFAND6Q6FIF0 208 aa7.06□□□□□ -1.28
MDC1-205ENST00000425072 Q8N976 141 aa7.06□□□□□ -1.28
MDC1-205ENST00000425072 IGLV4-60A0A075B6I1 120 aa7.05□□□□□ -1.28
MDC1-205ENST00000425072 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
MDC1-205ENST00000425072 DPM2O94777 84 aa7.05□□□□□ -1.28
MDC1-205ENST00000425072 DNAH10OSP0CZ25 163 aa7.05□□□□□ -1.28
MDC1-205ENST00000425072 ODF1Q14990 250 aa7.05□□□□□ -1.28
MDC1-205ENST00000425072 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
MDC1-205ENST00000425072 Q9H8V8 135 aa7.05□□□□□ -1.28
MDC1-205ENST00000425072 RYR1P21817 5038 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 TRAV8-4A0A0B4J246 113 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 TINCRA0A1B0GVN0 87 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 IGHV3-30P01768 117 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 IGHV3-33P01772 117 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 IGKCP01834 107 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 IGHV3-30-3P0DP02 117 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 IGHV3-30-5P0DP03 117 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 REG3AQ06141 175 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 Q6ZUT4 128 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 WFDC10BQ8IUB3 73 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 LINC00269Q8N2A0 174 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 C10orf126Q8N4M7 172 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
MDC1-205ENST00000425072 MRPL35Q9NZE8 188 aaKnown RBP7.04□□□□□ -1.28
MDC1-205ENST00000425072 HYDINQ4G0P3 5121 aa7.04□□□□□ -1.28
MDC1-205ENST00000425072 TRAV13-1A0A0B4J241 112 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 LINC00959A0A1B0GUT2 108 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 UBE2D1P51668 147 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 HERVK_113P63121 156 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 S100A12P80511 92 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 FAM19A3Q7Z5A8 133 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 KLK12Q9UKR0 248 aa7.03□□□□□ -1.28
MDC1-205ENST00000425072 RYR2Q92736 4967 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 CRPP02741 224 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 SMIM6P0DI80 62 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 IGLC3P0DOY3 106 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 MIAQ16674 131 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
MDC1-205ENST00000425072 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 NFE4Q86UQ8 179 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
MDC1-205ENST00000425072 TRAV8-3A0A0A6YYJ7 113 aa7.01□□□□□ -1.29
MDC1-205ENST00000425072 IGKV3OR2-268A0A0C4DH90 116 aa7.01□□□□□ -1.29
MDC1-205ENST00000425072 A0A0J9YXV3 536 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms