RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
MSH5-206ENST00000423982 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
MSH5-206ENST00000423982 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
MSH5-206ENST00000423982 RBMY1FQ15415 496 aaKnown RBP10.48□□□□□ -0.73
MSH5-206ENST00000423982 CCDC179H3BU77 68 aa10.47□□□□□ -0.73
MSH5-206ENST00000423982 C2CD3Q4AC94 2353 aa10.47□□□□□ -0.73
MSH5-206ENST00000423982 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
MSH5-206ENST00000423982 NDUFV3P56181 108 aaKnown RBP10.47□□□□□ -0.73
MSH5-206ENST00000423982 SVIPQ8NHG7 77 aa10.47□□□□□ -0.73
MSH5-206ENST00000423982 TTC32Q5I0X7 151 aa10.46□□□□□ -0.73
MSH5-206ENST00000423982 TRAV8-4A0A0B4J246 113 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 TRBV10-2A0A0K0K1G8 114 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 H3BUA1 57 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 H7C423 109 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 GAGE5Q13069 117 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 GAGE6Q13070 117 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 C15orf53Q8NAA6 179 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 ICOSQ9Y6W8 199 aa10.46□□□□□ -0.74
MSH5-206ENST00000423982 BRI3O95415 125 aa10.45□□□□□ -0.74
MSH5-206ENST00000423982 C2orf82Q6UX34 121 aa10.45□□□□□ -0.74
MSH5-206ENST00000423982 ATRQ13535 2644 aa10.45□□□□□ -0.74
MSH5-206ENST00000423982 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
MSH5-206ENST00000423982 CFHR3Q02985 330 aa10.45□□□□□ -0.74
MSH5-206ENST00000423982 Q6ZSN1 163 aa10.45□□□□□ -0.74
MSH5-206ENST00000423982 WNK1Q9H4A3 2382 aa10.44□□□□□ -0.74
MSH5-206ENST00000423982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.44□□□□□ -0.74
MSH5-206ENST00000423982 IGKV2-29A2NJV5 120 aaPredicted RBP10.44□□□□□ -0.74
MSH5-206ENST00000423982 H3BMM0 161 aa10.44□□□□□ -0.74
MSH5-206ENST00000423982 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
MSH5-206ENST00000423982 DUX3Q96PT4 197 aa10.44□□□□□ -0.74
MSH5-206ENST00000423982 IGHV3-38A0A0C4DH36 116 aa10.44□□□□□ -0.74
MSH5-206ENST00000423982 SYNJ2BPP57105 145 aa10.44□□□□□ -0.74
MSH5-206ENST00000423982 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
MSH5-206ENST00000423982 K7EMT4 169 aa10.43□□□□□ -0.74
MSH5-206ENST00000423982 M0QXV9 152 aa10.43□□□□□ -0.74
MSH5-206ENST00000423982 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
MSH5-206ENST00000423982 MRPS36P82909 103 aaKnown RBP10.43□□□□□ -0.74
MSH5-206ENST00000423982 ZNF702PQ9H963 129 aa10.43□□□□□ -0.74
MSH5-206ENST00000423982 K7EQG2 157 aa10.43□□□□□ -0.74
MSH5-206ENST00000423982 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
MSH5-206ENST00000423982 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
MSH5-206ENST00000423982 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
MSH5-206ENST00000423982 IFITM1P13164 125 aa10.41□□□□□ -0.74
MSH5-206ENST00000423982 PSMB8P28062 276 aa10.41□□□□□ -0.74
MSH5-206ENST00000423982 VSIG2Q96IQ7 327 aa10.41□□□□□ -0.74
MSH5-206ENST00000423982 TENM1Q9UKZ4 2725 aa10.41□□□□□ -0.74
MSH5-206ENST00000423982 MIAQ16674 131 aa10.41□□□□□ -0.74
MSH5-206ENST00000423982 KHDC1LQ5JSQ8 128 aa10.41□□□□□ -0.74
MSH5-206ENST00000423982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.4□□□□□ -0.74
MSH5-206ENST00000423982 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.74
MSH5-206ENST00000423982 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.75
MSH5-206ENST00000423982 LINC00467Q9BRT7 94 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 CHCHD7Q9BUK0 85 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 SPANXDQ9BXN6 97 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 SPANXCQ9NY87 97 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 UBE2D4Q9Y2X8 147 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 PYGO1Q9Y3Y4 419 aa10.39□□□□□ -0.75
MSH5-206ENST00000423982 NOTCH3Q9UM47 2321 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 GAGE12JA6NER3 117 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 GAGE7O76087 117 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 GAGE4Q13068 117 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 C3orf56Q8N813 242 aa10.38□□□□□ -0.75
MSH5-206ENST00000423982 TRGV11A0A075B6L2 103 aa10.37□□□□□ -0.75
MSH5-206ENST00000423982 LST1O00453 97 aa10.36□□□□□ -0.75
MSH5-206ENST00000423982 C18orf65Q6ZTR6 163 aa10.36□□□□□ -0.75
MSH5-206ENST00000423982 TINCRA0A1B0GVN0 87 aa10.36□□□□□ -0.75
MSH5-206ENST00000423982 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
MSH5-206ENST00000423982 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
MSH5-206ENST00000423982 COX6CP09669 75 aa10.36□□□□□ -0.75
MSH5-206ENST00000423982 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
MSH5-206ENST00000423982 COX6A2Q02221 97 aa10.36□□□□□ -0.75
MSH5-206ENST00000423982 DEFB136Q30KP8 78 aa10.36□□□□□ -0.75
MSH5-206ENST00000423982 CITED2Q99967 270 aaPredicted RBP10.36□□□□□ -0.75
MSH5-206ENST00000423982 NDUFA7O95182 113 aa10.35□□□□□ -0.75
MSH5-206ENST00000423982 DEFB131AP59861 70 aa10.35□□□□□ -0.75
MSH5-206ENST00000423982 HILS1P60008 231 aa10.35□□□□□ -0.75
MSH5-206ENST00000423982 LINC01600Q96MT4 127 aa10.35□□□□□ -0.75
MSH5-206ENST00000423982 A0A1W2PRX2 142 aa10.35□□□□□ -0.75
MSH5-206ENST00000423982 CHCHD5Q9BSY4 110 aa10.35□□□□□ -0.75
MSH5-206ENST00000423982 H3BT86 120 aa10.34□□□□□ -0.75
MSH5-206ENST00000423982 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
MSH5-206ENST00000423982 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
MSH5-206ENST00000423982 TMEM101Q96IK0 257 aa10.34□□□□□ -0.75
MSH5-206ENST00000423982 Q8N2B8 174 aa10.34□□□□□ -0.75
MSH5-206ENST00000423982 RNASE1P07998 156 aaKnown RBP10.33□□□□□ -0.76
MSH5-206ENST00000423982 Q6Q795 121 aa10.33□□□□□ -0.76
MSH5-206ENST00000423982 VWFP04275 2813 aa10.33□□□□□ -0.76
MSH5-206ENST00000423982 SLURP1P55000 103 aa10.32□□□□□ -0.76
MSH5-206ENST00000423982 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
MSH5-206ENST00000423982 Q9H8V8 135 aa10.32□□□□□ -0.76
MSH5-206ENST00000423982 SOSTDC1Q6X4U4 206 aa10.31□□□□□ -0.76
MSH5-206ENST00000423982 FBN1P35555 2871 aaKnown RBP10.31□□□□□ -0.76
MSH5-206ENST00000423982 SMIM20Q8N5G0 67 aa10.31□□□□□ -0.76
MSH5-206ENST00000423982 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms