RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RHODO00212 210 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 INSL3P51460 131 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 TRBV6-5A0A0K0K1A5 114 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 TM2D2Q9BX73 214 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 ANK2Q01484 3957 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 FHL3Q13643 280 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 RRN3P1Q2M238 152 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 UFSP1Q6NVU6 142 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 C10orf126Q8N4M7 172 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 TEX48A0A1B0GUV7 120 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 HIGD1BQ9P298 99 aa8.54□□□□□ -1.04
PTPRN-204ENST00000423636 GAGE6Q13070 117 aa8.53□□□□□ -1.04
PTPRN-204ENST00000423636 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
PTPRN-204ENST00000423636 MUSTN1Q8IVN3 82 aa8.53□□□□□ -1.04
PTPRN-204ENST00000423636 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
PTPRN-204ENST00000423636 A4D1N5 150 aa8.53□□□□□ -1.04
PTPRN-204ENST00000423636 CRLF1O75462 422 aa8.53□□□□□ -1.04
PTPRN-204ENST00000423636 RNASE1P07998 156 aaKnown RBP8.53□□□□□ -1.04
PTPRN-204ENST00000423636 TRGV4A0A0C4DH28 118 aa8.52□□□□□ -1.04
PTPRN-204ENST00000423636 SCGB1C2P0DMR2 95 aa8.52□□□□□ -1.04
PTPRN-204ENST00000423636 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.04
PTPRN-204ENST00000423636 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.04
PTPRN-204ENST00000423636 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
PTPRN-204ENST00000423636 HTN3P15516 51 aa8.52□□□□□ -1.05
PTPRN-204ENST00000423636 Q1RN00 199 aa8.52□□□□□ -1.05
PTPRN-204ENST00000423636 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.05
PTPRN-204ENST00000423636 HILS1P60008 231 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 AMELXQ99217 191 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 TSPAN13O95857 204 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 CFC1P0CG37 223 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 DEFB135Q30KP9 77 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 MGAM2Q2M2H8 2515 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 RHOHQ15669 191 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 Q8N3U1 123 aa8.51□□□□□ -1.05
PTPRN-204ENST00000423636 CIDEAO60543 219 aa8.5□□□□□ -1.05
PTPRN-204ENST00000423636 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
PTPRN-204ENST00000423636 GTSF1LQ9H1H1 148 aa8.5□□□□□ -1.05
PTPRN-204ENST00000423636 C19orf73Q9NVV2 129 aa8.5□□□□□ -1.05
PTPRN-204ENST00000423636 IGLV1-51P01701 117 aa8.49□□□□□ -1.05
PTPRN-204ENST00000423636 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
PTPRN-204ENST00000423636 TMEM86BQ8N661 226 aa8.49□□□□□ -1.05
PTPRN-204ENST00000423636 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
PTPRN-204ENST00000423636 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
PTPRN-204ENST00000423636 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
PTPRN-204ENST00000423636 RS1O15537 224 aa8.49□□□□□ -1.05
PTPRN-204ENST00000423636 RPL36AP83881 106 aaKnown RBP8.48□□□□□ -1.05
PTPRN-204ENST00000423636 RPL36ALQ969Q0 106 aaKnown RBP8.48□□□□□ -1.05
PTPRN-204ENST00000423636 A0A0J9YXY3 114 aa8.48□□□□□ -1.05
PTPRN-204ENST00000423636 A0A1B0GWB2 263 aa8.48□□□□□ -1.05
PTPRN-204ENST00000423636 PLAC8L1A1L4L8 177 aa8.48□□□□□ -1.05
PTPRN-204ENST00000423636 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
PTPRN-204ENST00000423636 K7EQD1 137 aa8.48□□□□□ -1.05
PTPRN-204ENST00000423636 NDUFA11Q86Y39 141 aa8.47□□□□□ -1.05
PTPRN-204ENST00000423636 TMEM263Q8WUH6 116 aaKnown RBP8.47□□□□□ -1.05
PTPRN-204ENST00000423636 CHCHD5Q9BSY4 110 aa8.47□□□□□ -1.05
PTPRN-204ENST00000423636 IGLV4-60A0A075B6I1 120 aa8.46□□□□□ -1.05
PTPRN-204ENST00000423636 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.05
PTPRN-204ENST00000423636 UBE2L6O14933 153 aa8.46□□□□□ -1.06
PTPRN-204ENST00000423636 LEPROTO15243 131 aa8.46□□□□□ -1.06
PTPRN-204ENST00000423636 A8MTW9 85 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 TCL1BO95988 128 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 Q9H8V8 135 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 IGLV10-54A0A075B6I4 117 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 BEAN1Q3B7T3 259 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 TMEM101Q96IK0 257 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 DNAJC30Q96LL9 226 aa8.45□□□□□ -1.06
PTPRN-204ENST00000423636 LINC00242Q5T6M2 205 aa8.44□□□□□ -1.06
PTPRN-204ENST00000423636 BAHCC1Q9P281 2608 aa8.44□□□□□ -1.06
PTPRN-204ENST00000423636 CSMD3Q7Z407 3707 aa8.43□□□□□ -1.06
PTPRN-204ENST00000423636 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
PTPRN-204ENST00000423636 CSNK1G2-AS1Q8NCQ2 148 aa8.43□□□□□ -1.06
PTPRN-204ENST00000423636 UBE2D1P51668 147 aa8.43□□□□□ -1.06
PTPRN-204ENST00000423636 OXLD1Q5BKU9 147 aa8.43□□□□□ -1.06
PTPRN-204ENST00000423636 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
PTPRN-204ENST00000423636 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 PRB2P02812 416 aaPredicted RBP8.42□□□□□ -1.06
PTPRN-204ENST00000423636 GYPEP15421 78 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 PIK3CD-AS1Q5SR53 167 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 TMEM238LA0A1B0GVL6 79 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 A6NJY4 79 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 SMCPP49901 116 aaPredicted RBP8.42□□□□□ -1.06
PTPRN-204ENST00000423636 FAM110AQ9BQ89 295 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 TAL2Q16559 108 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 PRO1854Q9UHT4 67 aa8.42□□□□□ -1.06
PTPRN-204ENST00000423636 A0A1B0GV72 72 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 C16orf95Q9H693 158 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 TRAV4A0A0B4J268 109 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms