RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 LYPD6BQ8NI32 183 aa2.82□□□□□ -1.96
CDC42EP3-202ENST00000422687 DPH3P1Q9H4G8 78 aa2.82□□□□□ -1.96
CDC42EP3-202ENST00000422687 EPDR1Q9UM22 224 aa2.82□□□□□ -1.96
CDC42EP3-202ENST00000422687 HSPB11Q9Y547 144 aa2.82□□□□□ -1.96
CDC42EP3-202ENST00000422687 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 TRAV8-4A0A0B4J246 113 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 A0A1W2PPV4 95 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 B4DEV8 164 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 PEX7O00628 323 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 SIX6O95475 246 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 PTTG1O95997 202 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 P01737 135 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 GZMBP10144 247 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 GCHFRP30047 84 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 RAB4BP61018 213 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 REG3AQ06141 175 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 ZNF726P1Q15940 193 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 IQCJQ1A5X6 159 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 TMEM97Q5BJF2 176 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 FAM74A4Q5TZK3 123 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 ZFP82Q8N141 532 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 SCGB1C1Q8TD33 95 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 WFDC1Q9HC57 220 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 ARL2-SNX15V9GYD0 113 aa2.81□□□□□ -1.96
CDC42EP3-202ENST00000422687 IGLV10-54A0A075B6I4 117 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 MUC21A0A0G2JKD1 596 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 TRBV6-1A0A0K0K1D8 114 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 A0A1W2PRE2 83 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 GRIFINA4D1Z8 144 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 HMGB3O15347 200 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 SH2D1AO60880 128 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 NDUFS6O75380 124 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 MPC2O95563 127 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 CXCL1P09341 107 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 TPT1P13693 172 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 RPL12P30050 165 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 CDC34P49427 236 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 H2BFSP57053 126 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 COX6A2Q02221 97 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 Q86TA4 180 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 C15orf56Q8N910 161 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 PPP1R1CQ8WVI7 109 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 DPH3Q96FX2 82 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 TMEM167BQ9NRX6 74 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 PHLDA3Q9Y5J5 127 aa2.8□□□□□ -1.96
CDC42EP3-202ENST00000422687 M0R036 132 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 M0R381 172 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 CXorf1O96002 111 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 RPS10P46783 165 aaKnown RBP2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 COA6Q5JTJ3 125 aaKnown RBP2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 FAM162BQ5T6X4 162 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 CLPSL2Q6UWE3 100 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 PSMG3Q9BT73 122 aaPredicted RBP2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 DERL1Q9BUN8 251 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 CCDC32Q9BV29 185 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 SMIM3Q9BZL3 60 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 ZFP30Q9Y2G7 519 aa2.79□□□□□ -1.96
CDC42EP3-202ENST00000422687 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 TRBV25-1A0A075B6N4 114 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 A0A096LNI7 61 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 GVQW2A0A096LPI5 108 aaPredicted RBP2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 IGHV1-24A0A0C4DH33 117 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 CCDC160A6NGH7 325 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 SMKR1H3BMG3 65 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 SNAI2O43623 268 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 MBP02144 154 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 OR5AL1P0C617 328 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 PET100P0DJ07 73 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 ATP6V0CP27449 155 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 SERF2P84101 59 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 LINC00173Q6ZV60 143 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 INO80EQ8NBZ0 244 aaPredicted RBP2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 OR10AG1Q8NH19 301 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 HIST1H2BAQ96A08 127 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 NKX6-2Q9C056 277 aaPredicted RBP2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 MED28Q9H204 178 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 LINC00474Q9P2X8 69 aa2.78□□□□□ -1.96
CDC42EP3-202ENST00000422687 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 TMSB15BA0A087X1C1 80 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 IGKV2-24A0A0C4DH68 120 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 A0A0U1RQV1 116 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 H7C1H1 209 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 M0QY20 66 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 LTAP01374 205 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 GIPP09681 153 aaPredicted RBP2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 ZNF56Q15929 161 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 TEX43Q6ZNM6 134 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 CAMK2N1Q7Z7J9 78 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 CBLN2Q8IUK8 224 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 ZNF664Q8N3J9 261 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 FMC1Q96HJ9 113 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 AQP10Q96PS8 301 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 ZNF471Q9BX82 626 aaPredicted RBP2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 PSORS1C2Q9UIG4 136 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 TNFSF18Q9UNG2 199 aa2.77□□□□□ -1.97
CDC42EP3-202ENST00000422687 A6NDN8 102 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms