RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 IGLL5B9A064 214 aa7.89□□□□□ -1.15
DDX56-203ENST00000421223 H7C2G1 150 aa7.89□□□□□ -1.15
DDX56-203ENST00000421223 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
DDX56-203ENST00000421223 LOC107984156A0A0G2JMH3 177 aa7.89□□□□□ -1.15
DDX56-203ENST00000421223 ZNF22P17026 224 aaPredicted RBP7.89□□□□□ -1.15
DDX56-203ENST00000421223 Q6ZUT4 128 aa7.89□□□□□ -1.15
DDX56-203ENST00000421223 ARL17AQ8IVW1 177 aa7.89□□□□□ -1.15
DDX56-203ENST00000421223 HIVEP1P15822 2718 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 A0A1B0GWB2 263 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 PRSS2P07478 247 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 NPC2P61916 151 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 SPINK8P0C7L1 97 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 DEFB130BP0DP73 79 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 DEFB130AP0DP74 79 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 C16orf95Q9H693 158 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 TENM1Q9UKZ4 2725 aa7.88□□□□□ -1.15
DDX56-203ENST00000421223 A0A0J9YY99 117 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 RS1O15537 224 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 NDUFA7O95182 113 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 IGLV1-51P01701 117 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 KRTAP10-3P60369 221 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 CHCHD7Q9BUK0 85 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 LOC100131303A0A0U1RQF7 123 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 H3BMG7 143 aa7.87□□□□□ -1.15
DDX56-203ENST00000421223 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 RPL36AP83881 106 aaKnown RBP7.86□□□□□ -1.15
DDX56-203ENST00000421223 SLC25A29Q8N8R3 303 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 RPL36ALQ969Q0 106 aaKnown RBP7.86□□□□□ -1.15
DDX56-203ENST00000421223 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 NSD1Q96L73 2696 aaPredicted RBP7.86□□□□□ -1.15
DDX56-203ENST00000421223 A0A0U1RRA0 63 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 WIPF1O43516 503 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 GIG44P09565 113 aaPredicted RBP7.86□□□□□ -1.15
DDX56-203ENST00000421223 TMEM263Q8WUH6 116 aaKnown RBP7.86□□□□□ -1.15
DDX56-203ENST00000421223 TRGV4A0A0C4DH28 118 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 TMEM223A0PJW6 202 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 BEAN1Q3B7T3 259 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 SPATA3Q8NHX4 192 aa7.86□□□□□ -1.15
DDX56-203ENST00000421223 GAGE12HA6NDE8 117 aa7.85□□□□□ -1.15
DDX56-203ENST00000421223 LINC00694P0DN24 101 aa7.85□□□□□ -1.15
DDX56-203ENST00000421223 UBE2D4Q9Y2X8 147 aa7.85□□□□□ -1.15
DDX56-203ENST00000421223 SEC61GP60059 68 aa7.85□□□□□ -1.15
DDX56-203ENST00000421223 NFE4Q86UQ8 179 aa7.85□□□□□ -1.15
DDX56-203ENST00000421223 LINC00482Q8N8I6 264 aa7.85□□□□□ -1.15
DDX56-203ENST00000421223 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
DDX56-203ENST00000421223 TEP1Q99973 2627 aaKnown RBP7.84□□□□□ -1.15
DDX56-203ENST00000421223 IGHV3-30-3P0DP02 117 aa7.84□□□□□ -1.15
DDX56-203ENST00000421223 K7EQD1 137 aa7.84□□□□□ -1.15
DDX56-203ENST00000421223 LEPROTO15243 131 aa7.84□□□□□ -1.15
DDX56-203ENST00000421223 FAM104AQ969W3 186 aa7.84□□□□□ -1.15
DDX56-203ENST00000421223 F8P00451 2351 aa7.84□□□□□ -1.15
DDX56-203ENST00000421223 DEFB4AO15263 64 aa7.84□□□□□ -1.16
DDX56-203ENST00000421223 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.16
DDX56-203ENST00000421223 CDKN2A-AS1Q9UH64 79 aa7.83□□□□□ -1.16
DDX56-203ENST00000421223 F8W1H4 67 aa7.83□□□□□ -1.16
DDX56-203ENST00000421223 SCGB1C2P0DMR2 95 aa7.83□□□□□ -1.16
DDX56-203ENST00000421223 DNAJC30Q96LL9 226 aa7.83□□□□□ -1.16
DDX56-203ENST00000421223 C19orf73Q9NVV2 129 aa7.83□□□□□ -1.16
DDX56-203ENST00000421223 SMIM9A6NGZ8 99 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 CRLF1O75462 422 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 PSMB2P49721 201 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 WFDC2Q14508 124 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 DAND5Q8N907 189 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 AMELXQ99217 191 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 ANAPC13Q9BS18 74 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 SPANXA1Q9NS26 97 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 PYGO1Q9Y3Y4 419 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 A0A096LPF7 62 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 F5H768 121 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 UBE2L6O14933 153 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
DDX56-203ENST00000421223 MUSTN1Q8IVN3 82 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 C10orf126Q8N4M7 172 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 C1QTNF4Q9BXJ3 329 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 NDUFA12Q9UI09 145 aa7.82□□□□□ -1.16
DDX56-203ENST00000421223 UBE2D1P51668 147 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 Q1RN00 199 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 NTM-AS1Q6ZSK4 140 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 SPANXB1Q9NS25 103 aaPredicted RBP7.81□□□□□ -1.16
DDX56-203ENST00000421223 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 TRAV4A0A0B4J268 109 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 IGHV3-30P01768 117 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 IGHV3-30-5P0DP03 117 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 INSL3P51460 131 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 COX6A2Q02221 97 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 PIK3CD-AS1Q5SR53 167 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 C16orf74Q96GX8 76 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 PRO0461Q9UI25 63 aa7.81□□□□□ -1.16
DDX56-203ENST00000421223 MRPS36P82909 103 aaKnown RBP7.81□□□□□ -1.16
DDX56-203ENST00000421223 CFC1BP0CG36 223 aa7.8□□□□□ -1.16
DDX56-203ENST00000421223 CFC1P0CG37 223 aa7.8□□□□□ -1.16
DDX56-203ENST00000421223 A0A0J9YXY3 114 aa7.8□□□□□ -1.16
DDX56-203ENST00000421223 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
DDX56-203ENST00000421223 NDUFA11Q86Y39 141 aa7.8□□□□□ -1.16
DDX56-203ENST00000421223 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.8□□□□□ -1.16
DDX56-203ENST00000421223 EDA2RQ9HAV5 297 aa7.8□□□□□ -1.16
DDX56-203ENST00000421223 IGHV1-58A0A0C4DH39 117 aa7.79□□□□□ -1.16
DDX56-203ENST00000421223 PLAC8L1A1L4L8 177 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms