RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CDC42SE2Q9NRR3 84 aa9.8□□□□□ -0.84
SHMT1P1-201ENST00000419974 C20orf202A1L168 122 aa9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 PRSS1P07477 247 aa9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 PLECQ15149 4684 aaKnown RBP9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 ESRGQ1W209 222 aa9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 CST9LQ9H4G1 147 aa9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 KLK5Q9Y337 293 aaPredicted RBP9.79□□□□□ -0.84
SHMT1P1-201ENST00000419974 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
SHMT1P1-201ENST00000419974 TRAV8-6A0A0B4J262 113 aa9.78□□□□□ -0.84
SHMT1P1-201ENST00000419974 ODF1Q14990 250 aa9.78□□□□□ -0.84
SHMT1P1-201ENST00000419974 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
SHMT1P1-201ENST00000419974 CHCHD5Q9BSY4 110 aa9.78□□□□□ -0.84
SHMT1P1-201ENST00000419974 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
SHMT1P1-201ENST00000419974 VCX2Q9H322 139 aa9.78□□□□□ -0.84
SHMT1P1-201ENST00000419974 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
SHMT1P1-201ENST00000419974 IGLL5B9A064 214 aa9.77□□□□□ -0.85
SHMT1P1-201ENST00000419974 DGAT2L7PQ6IED9 249 aa9.77□□□□□ -0.85
SHMT1P1-201ENST00000419974 ZNF664Q8N3J9 261 aa9.77□□□□□ -0.85
SHMT1P1-201ENST00000419974 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
SHMT1P1-201ENST00000419974 F8VRH5 84 aa9.76□□□□□ -0.85
SHMT1P1-201ENST00000419974 CCL25O15444 150 aa9.76□□□□□ -0.85
SHMT1P1-201ENST00000419974 AMMECR1LQ6DCA0 310 aa9.76□□□□□ -0.85
SHMT1P1-201ENST00000419974 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
SHMT1P1-201ENST00000419974 APLNQ9ULZ1 77 aa9.76□□□□□ -0.85
SHMT1P1-201ENST00000419974 MRPS16Q9Y3D3 137 aaKnown RBP9.76□□□□□ -0.85
SHMT1P1-201ENST00000419974 LYSTQ99698 3801 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 RYR2Q92736 4967 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 K7EP13 123 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 PLNP26678 52 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 CCL18P55774 89 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 RBX1P62877 108 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 NFE4Q86UQ8 179 aa9.75□□□□□ -0.85
SHMT1P1-201ENST00000419974 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
SHMT1P1-201ENST00000419974 SCGB1D1O95968 90 aa9.74□□□□□ -0.85
SHMT1P1-201ENST00000419974 GAGE6Q13070 117 aa9.74□□□□□ -0.85
SHMT1P1-201ENST00000419974 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
SHMT1P1-201ENST00000419974 Q6ZUT4 128 aa9.74□□□□□ -0.85
SHMT1P1-201ENST00000419974 C2orf88Q9BSF0 95 aa9.74□□□□□ -0.85
SHMT1P1-201ENST00000419974 LCE6AA0A183 80 aa9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 DNAH10OSP0CZ25 163 aa9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 SEC11AP67812 179 aa9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 MPV17L2Q567V2 206 aa9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 ZFAND6Q6FIF0 208 aa9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 OPRPNQ99935 248 aaPredicted RBP9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 CHTOPQ9Y3Y2 248 aaKnown RBP9.73□□□□□ -0.85
SHMT1P1-201ENST00000419974 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 IGLV4-60A0A075B6I1 120 aa9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 DPM2O94777 84 aa9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 UBE2D1P51668 147 aa9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 MRPL35Q9NZE8 188 aaKnown RBP9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
SHMT1P1-201ENST00000419974 DNAH1Q9P2D7 4330 aa9.71□□□□□ -0.86
SHMT1P1-201ENST00000419974 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
SHMT1P1-201ENST00000419974 IGKCP01834 107 aa9.71□□□□□ -0.86
SHMT1P1-201ENST00000419974 LINC00518Q8N0U6 118 aa9.71□□□□□ -0.86
SHMT1P1-201ENST00000419974 IGLV5-45A0A087WSX0 123 aa9.7□□□□□ -0.86
SHMT1P1-201ENST00000419974 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
SHMT1P1-201ENST00000419974 WFDC10BQ8IUB3 73 aa9.69□□□□□ -0.86
SHMT1P1-201ENST00000419974 H0Y8G0 127 aa9.68□□□□□ -0.86
SHMT1P1-201ENST00000419974 HERVK_113P63121 156 aa9.68□□□□□ -0.86
SHMT1P1-201ENST00000419974 LINC00242Q5T6M2 205 aa9.68□□□□□ -0.86
SHMT1P1-201ENST00000419974 LINC00959A0A1B0GUT2 108 aa9.67□□□□□ -0.86
SHMT1P1-201ENST00000419974 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
SHMT1P1-201ENST00000419974 SIVA1O15304 175 aa9.67□□□□□ -0.86
SHMT1P1-201ENST00000419974 C12orf57Q99622 126 aa9.67□□□□□ -0.86
SHMT1P1-201ENST00000419974 VPS13DQ5THJ4 4388 aa9.67□□□□□ -0.86
SHMT1P1-201ENST00000419974 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
SHMT1P1-201ENST00000419974 S100A12P80511 92 aa9.66□□□□□ -0.86
SHMT1P1-201ENST00000419974 ZC2HC1BQ5TFG8 222 aa9.66□□□□□ -0.86
SHMT1P1-201ENST00000419974 PMCHL2Q9BQD1 86 aa9.66□□□□□ -0.86
SHMT1P1-201ENST00000419974 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
SHMT1P1-201ENST00000419974 ANGP03950 147 aaKnown RBP9.65□□□□□ -0.86
SHMT1P1-201ENST00000419974 REG3AQ06141 175 aa9.65□□□□□ -0.86
SHMT1P1-201ENST00000419974 LINC01561Q8N1V8 128 aa9.65□□□□□ -0.86
SHMT1P1-201ENST00000419974 LINC00269Q8N2A0 174 aa9.65□□□□□ -0.86
SHMT1P1-201ENST00000419974 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
SHMT1P1-201ENST00000419974 IGHV3OR16-9A0A0B4J2B5 98 aa9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 HSBP1L1C9JCN9 74 aa9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 SS18Q15532 418 aa9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 MIAQ16674 131 aa9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 VAMP8Q9BV40 100 aa9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 Q9H8V8 135 aa9.64□□□□□ -0.87
SHMT1P1-201ENST00000419974 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
SHMT1P1-201ENST00000419974 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
SHMT1P1-201ENST00000419974 CDPF1Q6NVV7 123 aa9.63□□□□□ -0.87
SHMT1P1-201ENST00000419974 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
SHMT1P1-201ENST00000419974 HYDINQ4G0P3 5121 aa9.63□□□□□ -0.87
SHMT1P1-201ENST00000419974 TMEM223A0PJW6 202 aa9.62□□□□□ -0.87
SHMT1P1-201ENST00000419974 E9PLD3 99 aa9.62□□□□□ -0.87
SHMT1P1-201ENST00000419974 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
SHMT1P1-201ENST00000419974 Q8N3U1 123 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms