RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 GAGE4Q13068 117 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 GAGE5Q13069 117 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 TMEM170BQ5T4T1 132 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 CEMP1Q6PRD7 247 aaPredicted RBP6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 SHISA2Q6UWI4 295 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 CEND1Q8N111 149 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 LINC00469Q8N7U9 141 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 Q8NAQ8 132 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 PLEKHB2Q96CS7 222 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 ZMAT5Q9UDW3 170 aaKnown RBP6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 J3QQQ9 107 aa6.37□□□□□ -1.39
LINCMD1-201ENST00000418518 FXYD2P54710 66 aa6.37□□□□□ -1.39
LINCMD1-201ENST00000418518 DEFB135Q30KP9 77 aa6.37□□□□□ -1.39
LINCMD1-201ENST00000418518 RNF183Q96D59 192 aa6.37□□□□□ -1.39
LINCMD1-201ENST00000418518 TMEM243Q9BU79 118 aa6.37□□□□□ -1.39
LINCMD1-201ENST00000418518 SPANXB1Q9NS25 103 aaPredicted RBP6.37□□□□□ -1.39
LINCMD1-201ENST00000418518 STAB1Q9NY15 2570 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 IGHV4-28A0A0C4DH34 117 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 A0A0J9YY99 117 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 LOC100131303A0A0U1RQF7 123 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 A0A1B0GWB2 263 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 IGHV4-30-4P0DP06 118 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 CDC42SE2Q9NRR3 84 aa6.36□□□□□ -1.39
LINCMD1-201ENST00000418518 TRBV6-8A0A0A6YYG3 113 aa6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 LGALS3P17931 250 aaKnown RBP6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 GCSHP23434 173 aa6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 HERVK_113P63121 156 aa6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 RNASE13Q5GAN3 156 aaKnown RBP6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 Q6ZVH6 145 aa6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 PRO0255Q9UI72 69 aa6.35□□□□□ -1.39
LINCMD1-201ENST00000418518 IGLV5-39A0A0G2JS06 123 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 C9orf118A6NHY6 69 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 CYSRT1A8MQ03 144 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 IGHV3-30-3P0DP02 117 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 DEFB130BP0DP73 79 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 DEFB130AP0DP74 79 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 DGAT2L7PQ6IED9 249 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 PRIMA1Q86XR5 153 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
LINCMD1-201ENST00000418518 TEX48A0A1B0GUV7 120 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 K7EP13 123 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 SMIM13P0DJ93 91 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 UBE2V1Q13404 147 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 LINC00242Q5T6M2 205 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 SCGB1D4Q6XE38 83 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 C3orf56Q8N813 242 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 VSIG2Q96IQ7 327 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 MAST4O15021 2626 aa6.33□□□□□ -1.4
LINCMD1-201ENST00000418518 TRAV26-1A0A087WT03 109 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 UBE2L6O14933 153 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 GYPEP15421 78 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 DAD1P61803 113 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 OXLD1Q5BKU9 147 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 AMMECR1LQ6DCA0 310 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 ZFAND6Q6FIF0 208 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 C10orf126Q8N4M7 172 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 ATP6V0E2Q8NHE4 81 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 TMEM101Q96IK0 257 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 GEMIN7Q9H840 131 aaKnown RBP6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 CDKN2A-AS1Q9UH64 79 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 CELA1Q9UNI1 258 aa6.32□□□□□ -1.4
LINCMD1-201ENST00000418518 ANK2Q01484 3957 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 TMEM238LA0A1B0GVL6 79 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 A6NJY4 79 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 ATP5G1P05496 136 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 SPART-AS1P0CW21 52 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 PTTG1IPP53801 180 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 C12orf74Q32Q52 190 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 NHP2Q9NX24 153 aaKnown RBP6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 NBEAL2Q6ZNJ1 2754 aa6.31□□□□□ -1.4
LINCMD1-201ENST00000418518 TRAV8-3A0A0A6YYJ7 113 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 A0A0J9YXY3 114 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 A0A1B0GUV1 79 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 F5H768 121 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 CCL25O15444 150 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 PAX4O43316 350 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 TIMM17BO60830 172 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 SPINK8P0C7L1 97 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 COX6A2Q02221 97 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 LITAFQ99732 161 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 C11orf68Q9H3H3 251 aaKnown RBP6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 NDUFA12Q9UI09 145 aa6.3□□□□□ -1.4
LINCMD1-201ENST00000418518 A0A1W2PPM0 123 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 H3BUT2 72 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 NDUFA1O15239 70 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 GAGE6Q13070 117 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 SRSF9Q13242 221 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 VAMP3Q15836 100 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 SPANXDQ9BXN6 97 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 SPANXCQ9NY87 97 aa6.29□□□□□ -1.4
LINCMD1-201ENST00000418518 FBN1P35555 2871 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms