RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 STHQ8IWL8 128 aa8.61□□□□□ -1.03
LIMK1-202ENST00000418310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.61□□□□□ -1.03
LIMK1-202ENST00000418310 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
LIMK1-202ENST00000418310 GAGE12JA6NER3 117 aa8.61□□□□□ -1.03
LIMK1-202ENST00000418310 J3QLI3 93 aa8.61□□□□□ -1.03
LIMK1-202ENST00000418310 COX6A2Q02221 97 aa8.61□□□□□ -1.03
LIMK1-202ENST00000418310 GAGE4Q13068 117 aa8.61□□□□□ -1.03
LIMK1-202ENST00000418310 GAGE5Q13069 117 aa8.61□□□□□ -1.03
LIMK1-202ENST00000418310 TRAV26-1A0A087WT03 109 aa8.6□□□□□ -1.03
LIMK1-202ENST00000418310 INSP01308 110 aa8.6□□□□□ -1.03
LIMK1-202ENST00000418310 PLA2G2AP14555 144 aa8.6□□□□□ -1.03
LIMK1-202ENST00000418310 CKS1BP61024 79 aa8.6□□□□□ -1.03
LIMK1-202ENST00000418310 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
LIMK1-202ENST00000418310 TEX49A0A1B0GTD5 131 aa8.6□□□□□ -1.03
LIMK1-202ENST00000418310 DEFB114Q30KQ6 69 aa8.6□□□□□ -1.03
LIMK1-202ENST00000418310 Q6ZTI0 123 aa8.6□□□□□ -1.03
LIMK1-202ENST00000418310 RPL35AP18077 110 aaKnown RBP8.59□□□□□ -1.03
LIMK1-202ENST00000418310 ODF3L2Q3SX64 289 aa8.59□□□□□ -1.03
LIMK1-202ENST00000418310 C11orf72Q8NBR9 251 aa8.59□□□□□ -1.03
LIMK1-202ENST00000418310 VSIG2Q96IQ7 327 aa8.59□□□□□ -1.03
LIMK1-202ENST00000418310 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
LIMK1-202ENST00000418310 LITAFQ99732 161 aa8.58□□□□□ -1.04
LIMK1-202ENST00000418310 ITPR2Q14571 2701 aa8.58□□□□□ -1.04
LIMK1-202ENST00000418310 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
LIMK1-202ENST00000418310 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
LIMK1-202ENST00000418310 Q9H8V8 135 aa8.58□□□□□ -1.04
LIMK1-202ENST00000418310 NOP10Q9NPE3 64 aaKnown RBP8.58□□□□□ -1.04
LIMK1-202ENST00000418310 RPL13AP40429 203 aaKnown RBP8.57□□□□□ -1.04
LIMK1-202ENST00000418310 WFDC11Q8NEX6 87 aa8.57□□□□□ -1.04
LIMK1-202ENST00000418310 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
LIMK1-202ENST00000418310 CRYBA4P53673 196 aa8.57□□□□□ -1.04
LIMK1-202ENST00000418310 DEFB113Q30KQ7 82 aa8.57□□□□□ -1.04
LIMK1-202ENST00000418310 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
LIMK1-202ENST00000418310 LOC100131303A0A0U1RQF7 123 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 C1orf158Q8N1D5 194 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 ATP6V0E2Q8NHE4 81 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 C4orf3Q8WVX3 66 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 ICOSQ9Y6W8 199 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 MEIG1Q5JSS6 88 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 GAGE7O76087 117 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 GAGE12FP0CL80 117 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 GAGE12GP0CL81 117 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 GAGE12IP0CL82 117 aa8.56□□□□□ -1.04
LIMK1-202ENST00000418310 TINCRA0A1B0GVN0 87 aa8.55□□□□□ -1.04
LIMK1-202ENST00000418310 C2orf82Q6UX34 121 aa8.55□□□□□ -1.04
LIMK1-202ENST00000418310 SPANXA1Q9NS26 97 aa8.55□□□□□ -1.04
LIMK1-202ENST00000418310 FSHBP01225 129 aa8.55□□□□□ -1.04
LIMK1-202ENST00000418310 MIAQ16674 131 aa8.55□□□□□ -1.04
LIMK1-202ENST00000418310 TOMM7Q9P0U1 55 aa8.55□□□□□ -1.04
LIMK1-202ENST00000418310 CITED2Q99967 270 aaPredicted RBP8.55□□□□□ -1.04
LIMK1-202ENST00000418310 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
LIMK1-202ENST00000418310 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
LIMK1-202ENST00000418310 CCL24O00175 119 aa8.53□□□□□ -1.04
LIMK1-202ENST00000418310 PRIMA1Q86XR5 153 aa8.53□□□□□ -1.04
LIMK1-202ENST00000418310 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
LIMK1-202ENST00000418310 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
LIMK1-202ENST00000418310 NTM-AS1Q6ZSK4 140 aa8.53□□□□□ -1.04
LIMK1-202ENST00000418310 RNF152Q8N8N0 203 aa8.53□□□□□ -1.04
LIMK1-202ENST00000418310 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
LIMK1-202ENST00000418310 ESM1Q9NQ30 184 aa8.53□□□□□ -1.04
LIMK1-202ENST00000418310 FASNP49327 2511 aaKnown RBP8.53□□□□□ -1.04
LIMK1-202ENST00000418310 RS1O15537 224 aa8.52□□□□□ -1.05
LIMK1-202ENST00000418310 CRLF1O75462 422 aa8.52□□□□□ -1.05
LIMK1-202ENST00000418310 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
LIMK1-202ENST00000418310 COX6CP09669 75 aa8.52□□□□□ -1.05
LIMK1-202ENST00000418310 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
LIMK1-202ENST00000418310 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.05
LIMK1-202ENST00000418310 C11orf68Q9H3H3 251 aaKnown RBP8.52□□□□□ -1.05
LIMK1-202ENST00000418310 SBSPONQ8IVN8 264 aa8.52□□□□□ -1.05
LIMK1-202ENST00000418310 ZNF843Q8N446 348 aa8.51□□□□□ -1.05
LIMK1-202ENST00000418310 UBE2L6O14933 153 aa8.51□□□□□ -1.05
LIMK1-202ENST00000418310 GAGE6Q13070 117 aa8.51□□□□□ -1.05
LIMK1-202ENST00000418310 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
LIMK1-202ENST00000418310 TRAV4A0A0B4J268 109 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 H7C423 109 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 K7EQD1 137 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 TENM4Q6N022 2769 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 CIRBPQ14011 172 aaKnown RBP8.5□□□□□ -1.05
LIMK1-202ENST00000418310 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 Q8N2B8 174 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 RNF183Q96D59 192 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 SPANXCQ9NY87 97 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
LIMK1-202ENST00000418310 BEAN1Q3B7T3 259 aa8.49□□□□□ -1.05
LIMK1-202ENST00000418310 HELZ2Q9BYK8 2649 aaKnown RBP8.49□□□□□ -1.05
LIMK1-202ENST00000418310 SNCGO76070 127 aa8.49□□□□□ -1.05
LIMK1-202ENST00000418310 SOSTDC1Q6X4U4 206 aa8.49□□□□□ -1.05
LIMK1-202ENST00000418310 LINC00308Q8TCZ7 52 aa8.49□□□□□ -1.05
LIMK1-202ENST00000418310 A8MTW9 85 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 TEX29Q8N6K0 151 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 A0A096LPF7 62 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 SMIM1B2RUZ4 78 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 DNAJC30Q96LL9 226 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 ANAPC13Q9BS18 74 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms