RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 LINC00694P0DN24 101 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 PIK3CD-AS1Q5SR53 167 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 C1orf158Q8N1D5 194 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
LINC00475-202ENST00000416438 AKAP9Q99996 3911 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 A0A0U1RRA0 63 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 MIAQ16674 131 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 ZNF625Q96I27 306 aaPredicted RBP10.59□□□□□ -0.71
LINC00475-202ENST00000416438 SPANXDQ9BXN6 97 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 SPANXCQ9NY87 97 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 CHD6Q8TD26 2715 aa10.59□□□□□ -0.71
LINC00475-202ENST00000416438 CKS1BP61024 79 aa10.58□□□□□ -0.72
LINC00475-202ENST00000416438 ZFAND6Q6FIF0 208 aa10.58□□□□□ -0.72
LINC00475-202ENST00000416438 TMEM101Q96IK0 257 aa10.58□□□□□ -0.72
LINC00475-202ENST00000416438 DNAJC30Q96LL9 226 aa10.58□□□□□ -0.72
LINC00475-202ENST00000416438 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
LINC00475-202ENST00000416438 ITPR3Q14573 2671 aa10.58□□□□□ -0.72
LINC00475-202ENST00000416438 KRTAP1-3Q8IUG1 177 aa10.57□□□□□ -0.72
LINC00475-202ENST00000416438 STHQ8IWL8 128 aa10.57□□□□□ -0.72
LINC00475-202ENST00000416438 ICOSQ9Y6W8 199 aa10.57□□□□□ -0.72
LINC00475-202ENST00000416438 C2CD3Q4AC94 2353 aa10.57□□□□□ -0.72
LINC00475-202ENST00000416438 CCDC168Q8NDH2 2452 aa10.57□□□□□ -0.72
LINC00475-202ENST00000416438 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
LINC00475-202ENST00000416438 Q6ZTI0 123 aa10.56□□□□□ -0.72
LINC00475-202ENST00000416438 CLEC2BQ92478 149 aa10.56□□□□□ -0.72
LINC00475-202ENST00000416438 A0A1B0GV72 72 aa10.56□□□□□ -0.72
LINC00475-202ENST00000416438 TRAV13-1A0A0B4J241 112 aa10.55□□□□□ -0.72
LINC00475-202ENST00000416438 NF1P21359 2839 aa10.55□□□□□ -0.72
LINC00475-202ENST00000416438 NBPF19A0A087WUL8 3843 aa10.55□□□□□ -0.72
LINC00475-202ENST00000416438 CIDEAO60543 219 aa10.55□□□□□ -0.72
LINC00475-202ENST00000416438 LINC00242Q5T6M2 205 aa10.55□□□□□ -0.72
LINC00475-202ENST00000416438 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
LINC00475-202ENST00000416438 LRRC75A-AS1Q8N1F1 130 aa10.55□□□□□ -0.72
LINC00475-202ENST00000416438 TIRAPP58753 221 aa10.54□□□□□ -0.72
LINC00475-202ENST00000416438 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
LINC00475-202ENST00000416438 WFDC11Q8NEX6 87 aa10.54□□□□□ -0.72
LINC00475-202ENST00000416438 Q9H8V8 135 aa10.54□□□□□ -0.72
LINC00475-202ENST00000416438 TRBV10-2A0A0K0K1G8 114 aa10.53□□□□□ -0.72
LINC00475-202ENST00000416438 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
LINC00475-202ENST00000416438 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
LINC00475-202ENST00000416438 GAGE4Q13068 117 aa10.53□□□□□ -0.72
LINC00475-202ENST00000416438 GAGE5Q13069 117 aa10.53□□□□□ -0.72
LINC00475-202ENST00000416438 SETD2Q9BYW2 2564 aaPredicted RBP10.53□□□□□ -0.72
LINC00475-202ENST00000416438 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
LINC00475-202ENST00000416438 FLNAP21333 2647 aaKnown RBP10.52□□□□□ -0.72
LINC00475-202ENST00000416438 H7C423 109 aa10.52□□□□□ -0.72
LINC00475-202ENST00000416438 NDUFA1O15239 70 aa10.52□□□□□ -0.72
LINC00475-202ENST00000416438 M0QXV9 152 aa10.52□□□□□ -0.73
LINC00475-202ENST00000416438 CCL24O00175 119 aa10.52□□□□□ -0.73
LINC00475-202ENST00000416438 C2orf82Q6UX34 121 aa10.52□□□□□ -0.73
LINC00475-202ENST00000416438 WFDC10AQ9H1F0 79 aa10.52□□□□□ -0.73
LINC00475-202ENST00000416438 DNAJC9-AS1A6NH13 148 aa10.51□□□□□ -0.73
LINC00475-202ENST00000416438 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
LINC00475-202ENST00000416438 NOP10Q9NPE3 64 aaKnown RBP10.51□□□□□ -0.73
LINC00475-202ENST00000416438 RPL36AP83881 106 aaKnown RBP10.51□□□□□ -0.73
LINC00475-202ENST00000416438 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
LINC00475-202ENST00000416438 RPL36ALQ969Q0 106 aaKnown RBP10.51□□□□□ -0.73
LINC00475-202ENST00000416438 ESM1Q9NQ30 184 aa10.51□□□□□ -0.73
LINC00475-202ENST00000416438 YAE1D1Q9NRH1 226 aa10.51□□□□□ -0.73
LINC00475-202ENST00000416438 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
LINC00475-202ENST00000416438 K7EQD1 137 aa10.5□□□□□ -0.73
LINC00475-202ENST00000416438 COX6CP09669 75 aa10.5□□□□□ -0.73
LINC00475-202ENST00000416438 PLA2G2AP14555 144 aa10.5□□□□□ -0.73
LINC00475-202ENST00000416438 HERVK_113P63121 156 aa10.5□□□□□ -0.73
LINC00475-202ENST00000416438 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
LINC00475-202ENST00000416438 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
LINC00475-202ENST00000416438 SMIM1B2RUZ4 78 aa10.49□□□□□ -0.73
LINC00475-202ENST00000416438 TIMM17BO60830 172 aa10.49□□□□□ -0.73
LINC00475-202ENST00000416438 JMJD1CQ15652 2540 aa10.49□□□□□ -0.73
LINC00475-202ENST00000416438 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
LINC00475-202ENST00000416438 LOC100131303A0A0U1RQF7 123 aa10.49□□□□□ -0.73
LINC00475-202ENST00000416438 CRLF1O75462 422 aa10.49□□□□□ -0.73
LINC00475-202ENST00000416438 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
LINC00475-202ENST00000416438 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
LINC00475-202ENST00000416438 IFITM1P13164 125 aa10.48□□□□□ -0.73
LINC00475-202ENST00000416438 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
LINC00475-202ENST00000416438 GIG44P09565 113 aaPredicted RBP10.48□□□□□ -0.73
LINC00475-202ENST00000416438 CLUHP3Q96NS8 147 aa10.48□□□□□ -0.73
LINC00475-202ENST00000416438 CDC42SE2Q9NRR3 84 aa10.48□□□□□ -0.73
LINC00475-202ENST00000416438 ACANP16112 2415 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 LST1O00453 97 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 RPL35AP18077 110 aaKnown RBP10.47□□□□□ -0.73
LINC00475-202ENST00000416438 TENM4Q6N022 2769 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 TRAV25A0A0B4J276 109 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 GAGE7O76087 117 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
LINC00475-202ENST00000416438 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
LINC00475-202ENST00000416438 TRAV8-4A0A0B4J246 113 aa10.46□□□□□ -0.73
LINC00475-202ENST00000416438 TRAV4A0A0B4J268 109 aa10.46□□□□□ -0.73
LINC00475-202ENST00000416438 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.73
LINC00475-202ENST00000416438 MEIG1Q5JSS6 88 aa10.46□□□□□ -0.73
LINC00475-202ENST00000416438 DAZ4Q86SG3 579 aaKnown RBP10.46□□□□□ -0.73
LINC00475-202ENST00000416438 PRIMA1Q86XR5 153 aa10.46□□□□□ -0.73
LINC00475-202ENST00000416438 DAZ3Q9NR90 486 aaKnown RBP10.46□□□□□ -0.73
LINC00475-202ENST00000416438 TRBV10-1A0A0K0K1A3 114 aa10.46□□□□□ -0.74
LINC00475-202ENST00000416438 RNF183Q96D59 192 aa10.46□□□□□ -0.74
LINC00475-202ENST00000416438 IGKV3OR2-268A0A0C4DH90 116 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms