RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 TRAV25A0A0B4J276 109 aa8.3□□□□□ -1.08
PTPRF-204ENST00000412568 KALRNO60229 2985 aa8.3□□□□□ -1.08
PTPRF-204ENST00000412568 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
PTPRF-204ENST00000412568 TRBV7-3A0A075B6L6 115 aa8.3□□□□□ -1.08
PTPRF-204ENST00000412568 K7EQD1 137 aa8.3□□□□□ -1.08
PTPRF-204ENST00000412568 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
PTPRF-204ENST00000412568 HAMPP81172 84 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 GHRHP01286 108 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 Q9H8V8 135 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 Q9HAA7 133 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 MUC4Q99102 2169 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 CHD6Q8TD26 2715 aa8.29□□□□□ -1.08
PTPRF-204ENST00000412568 OVOL2Q9BRP0 275 aa8.28□□□□□ -1.08
PTPRF-204ENST00000412568 E9PLD3 99 aa8.28□□□□□ -1.08
PTPRF-204ENST00000412568 BAALC-AS2P0C853 105 aa8.28□□□□□ -1.08
PTPRF-204ENST00000412568 NRACQ8N912 160 aa8.28□□□□□ -1.08
PTPRF-204ENST00000412568 C20orf203Q8NBC4 194 aa8.27□□□□□ -1.09
PTPRF-204ENST00000412568 TIMM17AQ99595 171 aa8.27□□□□□ -1.09
PTPRF-204ENST00000412568 RNF152Q8N8N0 203 aa8.27□□□□□ -1.09
PTPRF-204ENST00000412568 TMEM263Q8WUH6 116 aaKnown RBP8.27□□□□□ -1.09
PTPRF-204ENST00000412568 IGHV3-30P01768 117 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 IGHV3-33P01772 117 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 IGHV3-30-3P0DP02 117 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 IGHV3-30-5P0DP03 117 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 RNF183Q96D59 192 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 HILS1P60008 231 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 FAM110AQ9BQ89 295 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 MT-ATP8P03928 68 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 ATP5G1P05496 136 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 HERVK_113P63121 156 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 Q6ZUT4 128 aa8.26□□□□□ -1.09
PTPRF-204ENST00000412568 FAM236AA0A1B0GUQ0 79 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 FAM236BA0A1B0GV22 79 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 PSCAO43653 123 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 PRB2P02812 416 aaPredicted RBP8.25□□□□□ -1.09
PTPRF-204ENST00000412568 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 UBL5Q9BZL1 73 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 KLLNB2CW77 178 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 TRACP01848 142 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 CNFNQ9BYD5 112 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 TMEM126AQ9H061 195 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 ZNF561-AS1K7EIQ3 104 aa8.25□□□□□ -1.09
PTPRF-204ENST00000412568 C2orf91Q6ZV80 131 aa8.24□□□□□ -1.09
PTPRF-204ENST00000412568 NDUFA11Q86Y39 141 aa8.24□□□□□ -1.09
PTPRF-204ENST00000412568 M0QY20 66 aa8.24□□□□□ -1.09
PTPRF-204ENST00000412568 ODF3L2Q3SX64 289 aa8.24□□□□□ -1.09
PTPRF-204ENST00000412568 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.24□□□□□ -1.09
PTPRF-204ENST00000412568 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
PTPRF-204ENST00000412568 LRBAP50851 2863 aa8.24□□□□□ -1.09
PTPRF-204ENST00000412568 SPANXB1Q9NS25 103 aaPredicted RBP8.24□□□□□ -1.09
PTPRF-204ENST00000412568 WDFY3Q8IZQ1 3526 aa8.24□□□□□ -1.09
PTPRF-204ENST00000412568 IGKV3D-7A0A0C4DH55 119 aa8.23□□□□□ -1.09
PTPRF-204ENST00000412568 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
PTPRF-204ENST00000412568 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
PTPRF-204ENST00000412568 TCL1BO95988 128 aa8.23□□□□□ -1.09
PTPRF-204ENST00000412568 OXLD1Q5BKU9 147 aa8.23□□□□□ -1.09
PTPRF-204ENST00000412568 LINC00467Q9BRT7 94 aa8.23□□□□□ -1.09
PTPRF-204ENST00000412568 DAZ2Q13117 558 aaKnown RBP8.23□□□□□ -1.09
PTPRF-204ENST00000412568 DAZ4Q86SG3 579 aaKnown RBP8.23□□□□□ -1.09
PTPRF-204ENST00000412568 DAZ3Q9NR90 486 aaKnown RBP8.23□□□□□ -1.09
PTPRF-204ENST00000412568 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
PTPRF-204ENST00000412568 A0A096LNJ9 63 aa8.22□□□□□ -1.09
PTPRF-204ENST00000412568 TRAV13-2A0A0B4J235 113 aa8.22□□□□□ -1.09
PTPRF-204ENST00000412568 CFAP126Q5VTH2 177 aa8.22□□□□□ -1.09
PTPRF-204ENST00000412568 SLC25A29Q8N8R3 303 aa8.22□□□□□ -1.09
PTPRF-204ENST00000412568 ODF3Q96PU9 254 aa8.22□□□□□ -1.09
PTPRF-204ENST00000412568 LOC100131303A0A0U1RQF7 123 aa8.21□□□□□ -1.09
PTPRF-204ENST00000412568 CRYGDP07320 174 aa8.21□□□□□ -1.09
PTPRF-204ENST00000412568 KLK12Q9UKR0 248 aa8.21□□□□□ -1.09
PTPRF-204ENST00000412568 TM2D2Q9BX73 214 aa8.21□□□□□ -1.09
PTPRF-204ENST00000412568 CRIP2P52943 208 aaPredicted RBP8.21□□□□□ -1.1
PTPRF-204ENST00000412568 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.1
PTPRF-204ENST00000412568 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
PTPRF-204ENST00000412568 A8MZ25 164 aa8.2□□□□□ -1.1
PTPRF-204ENST00000412568 COL27A1Q8IZC6 1860 aaPredicted RBP8.2□□□□□ -1.1
PTPRF-204ENST00000412568 COX8CQ7Z4L0 72 aa8.2□□□□□ -1.1
PTPRF-204ENST00000412568 PRO0255Q9UI72 69 aa8.2□□□□□ -1.1
PTPRF-204ENST00000412568 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
PTPRF-204ENST00000412568 INSL3P51460 131 aa8.2□□□□□ -1.1
PTPRF-204ENST00000412568 CDKN2A-AS1Q9UH64 79 aa8.19□□□□□ -1.1
PTPRF-204ENST00000412568 TEX15Q9BXT5 2789 aa8.19□□□□□ -1.1
PTPRF-204ENST00000412568 TRAV4A0A0B4J268 109 aa8.19□□□□□ -1.1
PTPRF-204ENST00000412568 A0A1B0GX51 115 aa8.19□□□□□ -1.1
PTPRF-204ENST00000412568 TRBV27A0A0K0K1C4 114 aa8.18□□□□□ -1.1
PTPRF-204ENST00000412568 POLR2KP53803 58 aaKnown RBP8.18□□□□□ -1.1
PTPRF-204ENST00000412568 ZMAT4Q9H898 229 aa8.18□□□□□ -1.1
PTPRF-204ENST00000412568 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
PTPRF-204ENST00000412568 GCN1Q92616 2671 aaKnown RBP8.17□□□□□ -1.1
PTPRF-204ENST00000412568 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
PTPRF-204ENST00000412568 RBM3P98179 157 aaKnown RBP8.17□□□□□ -1.1
PTPRF-204ENST00000412568 SND1-IT1Q9HBX3 110 aa8.17□□□□□ -1.1
PTPRF-204ENST00000412568 ACYP1P07311 99 aa8.17□□□□□ -1.1
PTPRF-204ENST00000412568 SETXQ7Z333 2677 aaKnown RBP8.17□□□□□ -1.1
PTPRF-204ENST00000412568 ASPMQ8IZT6 3477 aa8.17□□□□□ -1.1
PTPRF-204ENST00000412568 DCHS1Q96JQ0 3298 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms