RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 TENM1Q9UKZ4 2725 aa17.13■□□□□ 0.33
PMS1-205ENST00000409985 A4D1N5 150 aa17.13■□□□□ 0.33
PMS1-205ENST00000409985 VSIG2Q96IQ7 327 aa17.13■□□□□ 0.33
PMS1-205ENST00000409985 RNF183Q96D59 192 aa17.12■□□□□ 0.33
PMS1-205ENST00000409985 XCL2Q9UBD3 114 aa17.12■□□□□ 0.33
PMS1-205ENST00000409985 Q9UF83 564 aa17.12■□□□□ 0.33
PMS1-205ENST00000409985 IGLV5-45A0A087WSX0 123 aa17.12■□□□□ 0.33
PMS1-205ENST00000409985 TMEM263Q8WUH6 116 aaKnown RBP17.12■□□□□ 0.33
PMS1-205ENST00000409985 SPANXDQ9BXN6 97 aa17.12■□□□□ 0.33
PMS1-205ENST00000409985 SPANXCQ9NY87 97 aa17.12■□□□□ 0.33
PMS1-205ENST00000409985 PSMB2P49721 201 aa17.11■□□□□ 0.33
PMS1-205ENST00000409985 MUSTN1Q8IVN3 82 aa17.11■□□□□ 0.33
PMS1-205ENST00000409985 SBSPONQ8IVN8 264 aa17.11■□□□□ 0.33
PMS1-205ENST00000409985 IGHV3-33P01772 117 aa17.1■□□□□ 0.33
PMS1-205ENST00000409985 AZU1P20160 251 aa17.1■□□□□ 0.33
PMS1-205ENST00000409985 CEMP1Q6PRD7 247 aaPredicted RBP17.1■□□□□ 0.33
PMS1-205ENST00000409985 SH2D6Q7Z4S9 175 aa17.1■□□□□ 0.33
PMS1-205ENST00000409985 FAM19A3Q7Z5A8 133 aa17.1■□□□□ 0.33
PMS1-205ENST00000409985 CSDC2Q9Y534 153 aaKnown RBP17.1■□□□□ 0.33
PMS1-205ENST00000409985 TIMM17BO60830 172 aa17.1■□□□□ 0.33
PMS1-205ENST00000409985 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.1■□□□□ 0.33
PMS1-205ENST00000409985 LITAFQ99732 161 aa17.1■□□□□ 0.33
PMS1-205ENST00000409985 M0QXV9 152 aa17.09■□□□□ 0.33
PMS1-205ENST00000409985 SMAGPQ0VAQ4 97 aa17.09■□□□□ 0.33
PMS1-205ENST00000409985 LINC01006Q8NI28 216 aa17.09■□□□□ 0.33
PMS1-205ENST00000409985 IGHV3-64A0A075B6Q5 118 aa17.08■□□□□ 0.33
PMS1-205ENST00000409985 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.08■□□□□ 0.33
PMS1-205ENST00000409985 IGKV2-29A2NJV5 120 aaPredicted RBP17.08■□□□□ 0.33
PMS1-205ENST00000409985 CIDEAO60543 219 aa17.08■□□□□ 0.33
PMS1-205ENST00000409985 Q6ZUT4 128 aa17.08■□□□□ 0.33
PMS1-205ENST00000409985 C1QTNF4Q9BXJ3 329 aa17.08■□□□□ 0.33
PMS1-205ENST00000409985 TRAV4A0A0B4J268 109 aa17.07■□□□□ 0.32
PMS1-205ENST00000409985 ZFAND6Q6FIF0 208 aa17.07■□□□□ 0.32
PMS1-205ENST00000409985 SPATA25Q9BR10 227 aa17.07■□□□□ 0.32
PMS1-205ENST00000409985 GEMIN7Q9H840 131 aaKnown RBP17.07■□□□□ 0.32
PMS1-205ENST00000409985 NDUFA12Q9UI09 145 aa17.07■□□□□ 0.32
PMS1-205ENST00000409985 ERG28Q9UKR5 140 aa17.07■□□□□ 0.32
PMS1-205ENST00000409985 SMCPP49901 116 aaPredicted RBP17.07■□□□□ 0.32
PMS1-205ENST00000409985 DAZ2Q13117 558 aaKnown RBP17.07■□□□□ 0.32
PMS1-205ENST00000409985 DAZ4Q86SG3 579 aaKnown RBP17.07■□□□□ 0.32
PMS1-205ENST00000409985 DAZ3Q9NR90 486 aaKnown RBP17.07■□□□□ 0.32
PMS1-205ENST00000409985 TCL1BO95988 128 aa17.06■□□□□ 0.32
PMS1-205ENST00000409985 RPL36AP83881 106 aaKnown RBP17.06■□□□□ 0.32
PMS1-205ENST00000409985 KRTAP24-1Q3LI83 254 aa17.06■□□□□ 0.32
PMS1-205ENST00000409985 RPL36ALQ969Q0 106 aaKnown RBP17.06■□□□□ 0.32
PMS1-205ENST00000409985 HIST2H2BDQ6DRA6 164 aa17.05■□□□□ 0.32
PMS1-205ENST00000409985 CITED2Q99967 270 aaPredicted RBP17.05■□□□□ 0.32
PMS1-205ENST00000409985 TRGV1A0A0A0MS02 117 aa17.05■□□□□ 0.32
PMS1-205ENST00000409985 NDUFA7O95182 113 aa17.05■□□□□ 0.32
PMS1-205ENST00000409985 TRAV8-3A0A0A6YYJ7 113 aa17.04■□□□□ 0.32
PMS1-205ENST00000409985 K7EQD1 137 aa17.04■□□□□ 0.32
PMS1-205ENST00000409985 FOXI1Q12951 378 aa17.04■□□□□ 0.32
PMS1-205ENST00000409985 DGAT2L7PQ6IED9 249 aa17.04■□□□□ 0.32
PMS1-205ENST00000409985 GAGE12HA6NDE8 117 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 EIF4EBP3O60516 100 aaPredicted RBP17.03■□□□□ 0.32
PMS1-205ENST00000409985 SCGB1A1P11684 91 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 IGHV3-38A0A0C4DH36 116 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 A0A1W2PRX2 142 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 SCGB1C2P0DMR2 95 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 IFITM1P13164 125 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 HERVK_113P63121 156 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 MIAQ16674 131 aa17.03■□□□□ 0.32
PMS1-205ENST00000409985 SIGMAR1Q99720 223 aa17.02■□□□□ 0.32
PMS1-205ENST00000409985 RNASE13Q5GAN3 156 aaKnown RBP17.01■□□□□ 0.31
PMS1-205ENST00000409985 LINC01600Q96MT4 127 aa17.01■□□□□ 0.31
PMS1-205ENST00000409985 COL6A5A8TX70 2615 aa17.01■□□□□ 0.31
PMS1-205ENST00000409985 IGLV1-51P01701 117 aa17.01■□□□□ 0.31
PMS1-205ENST00000409985 TEN1Q86WV5 123 aa17.01■□□□□ 0.31
PMS1-205ENST00000409985 C16orf74Q96GX8 76 aa17.01■□□□□ 0.31
PMS1-205ENST00000409985 TRBV30A0A0K0K1B3 111 aa17■□□□□ 0.31
PMS1-205ENST00000409985 NDUFA1O15239 70 aa17■□□□□ 0.31
PMS1-205ENST00000409985 KRTAP10-3P60369 221 aa17■□□□□ 0.31
PMS1-205ENST00000409985 MTURNQ8N3F0 131 aa17■□□□□ 0.31
PMS1-205ENST00000409985 GTSF1LQ9H1H1 148 aa17■□□□□ 0.31
PMS1-205ENST00000409985 IGHV3OR16-12A0A075B7B8 117 aa16.99■□□□□ 0.31
PMS1-205ENST00000409985 IGLV5-39A0A0G2JS06 123 aa16.99■□□□□ 0.31
PMS1-205ENST00000409985 SPINK8P0C7L1 97 aa16.99■□□□□ 0.31
PMS1-205ENST00000409985 SFTA2Q6UW10 78 aa16.99■□□□□ 0.31
PMS1-205ENST00000409985 C11orf44Q8N8P7 122 aa16.99■□□□□ 0.31
PMS1-205ENST00000409985 PPDPFLQ8WWR9 84 aa16.99■□□□□ 0.31
PMS1-205ENST00000409985 CDKN2A-AS1Q9UH64 79 aa16.99■□□□□ 0.31
PMS1-205ENST00000409985 Q6ZTI0 123 aa16.98■□□□□ 0.31
PMS1-205ENST00000409985 GIG44P09565 113 aaPredicted RBP16.97■□□□□ 0.31
PMS1-205ENST00000409985 H7C423 109 aa16.97■□□□□ 0.31
PMS1-205ENST00000409985 TMEM101Q96IK0 257 aa16.97■□□□□ 0.31
PMS1-205ENST00000409985 OVOL2Q9BRP0 275 aa16.97■□□□□ 0.31
PMS1-205ENST00000409985 ADAMTSL4-AS1Q5T5F5 129 aa16.96■□□□□ 0.31
PMS1-205ENST00000409985 C19orf73Q9NVV2 129 aa16.96■□□□□ 0.31
PMS1-205ENST00000409985 STAB1Q9NY15 2570 aa16.95■□□□□ 0.3
PMS1-205ENST00000409985 ADARB2-AS1A8MUL3 147 aa16.95■□□□□ 0.3
PMS1-205ENST00000409985 LINC00242Q5T6M2 205 aa16.95■□□□□ 0.3
PMS1-205ENST00000409985 PRSS2P07478 247 aa16.95■□□□□ 0.3
PMS1-205ENST00000409985 CIRBPQ14011 172 aaKnown RBP16.95■□□□□ 0.3
PMS1-205ENST00000409985 TRBV6-4A0A1B0GX49 114 aa16.94■□□□□ 0.3
PMS1-205ENST00000409985 ATXN8Q156A1 80 aa16.94■□□□□ 0.3
PMS1-205ENST00000409985 NTM-AS1Q6ZSK4 140 aa16.94■□□□□ 0.3
PMS1-205ENST00000409985 PLAC8L1A1L4L8 177 aa16.93■□□□□ 0.3
PMS1-205ENST00000409985 INSL3P51460 131 aa16.93■□□□□ 0.3
PMS1-205ENST00000409985 PPDPFQ9H3Y8 114 aa16.93■□□□□ 0.3
PMS1-205ENST00000409985 COPS9Q8WXC6 57 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 510.9 ms