RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 RYR2Q92736 4967 aa13.88□□□□□ -0.19
VSX1-203ENST00000409285 FAM19A2Q8N3H0 131 aa13.87□□□□□ -0.19
VSX1-203ENST00000409285 C10orf126Q8N4M7 172 aa13.87□□□□□ -0.19
VSX1-203ENST00000409285 Q8N976 141 aa13.87□□□□□ -0.19
VSX1-203ENST00000409285 TTC32Q5I0X7 151 aa13.87□□□□□ -0.19
VSX1-203ENST00000409285 TMEM101Q96IK0 257 aa13.87□□□□□ -0.19
VSX1-203ENST00000409285 TIMM17AQ99595 171 aa13.87□□□□□ -0.19
VSX1-203ENST00000409285 IGLV4-60A0A075B6I1 120 aa13.86□□□□□ -0.19
VSX1-203ENST00000409285 TRAV9-2A0A087WT02 112 aa13.86□□□□□ -0.19
VSX1-203ENST00000409285 IGIPA6NJ69 53 aa13.86□□□□□ -0.19
VSX1-203ENST00000409285 MRPS36P82909 103 aaKnown RBP13.86□□□□□ -0.19
VSX1-203ENST00000409285 OR5A1Q8NGJ0 315 aa13.86□□□□□ -0.19
VSX1-203ENST00000409285 HYDINQ4G0P3 5121 aa13.85□□□□□ -0.19
VSX1-203ENST00000409285 IGHV3-30P01768 117 aa13.85□□□□□ -0.19
VSX1-203ENST00000409285 IGHV3-33P01772 117 aa13.85□□□□□ -0.19
VSX1-203ENST00000409285 IGHV3-30-3P0DP02 117 aa13.85□□□□□ -0.19
VSX1-203ENST00000409285 IGHV3-30-5P0DP03 117 aa13.85□□□□□ -0.19
VSX1-203ENST00000409285 ERASQ7Z444 233 aa13.85□□□□□ -0.19
VSX1-203ENST00000409285 CDC42SE2Q9NRR3 84 aa13.85□□□□□ -0.19
VSX1-203ENST00000409285 NBDYA0A0U1RRE5 68 aa13.84□□□□□ -0.19
VSX1-203ENST00000409285 DGAT2L7PQ6IED9 249 aa13.84□□□□□ -0.19
VSX1-203ENST00000409285 FAM104AQ969W3 186 aa13.84□□□□□ -0.19
VSX1-203ENST00000409285 PRR34Q9NV39 138 aa13.84□□□□□ -0.19
VSX1-203ENST00000409285 TMEM141Q96I45 108 aa13.83□□□□□ -0.2
VSX1-203ENST00000409285 IFITM10A6NMD0 228 aa13.82□□□□□ -0.2
VSX1-203ENST00000409285 IBA57-AS1B1ANH7 110 aa13.82□□□□□ -0.2
VSX1-203ENST00000409285 ANGP03950 147 aaKnown RBP13.82□□□□□ -0.2
VSX1-203ENST00000409285 ZNF664Q8N3J9 261 aa13.82□□□□□ -0.2
VSX1-203ENST00000409285 SCGB3A1Q96QR1 104 aa13.82□□□□□ -0.2
VSX1-203ENST00000409285 HIST1H2BLQ99880 126 aa13.82□□□□□ -0.2
VSX1-203ENST00000409285 KRTAP1-5Q9BYS1 174 aa13.82□□□□□ -0.2
VSX1-203ENST00000409285 IGLV4-3A0A075B6K6 122 aa13.81□□□□□ -0.2
VSX1-203ENST00000409285 FABP4P15090 132 aa13.81□□□□□ -0.2
VSX1-203ENST00000409285 Q6ZR54 194 aa13.81□□□□□ -0.2
VSX1-203ENST00000409285 KLK12Q9UKR0 248 aa13.81□□□□□ -0.2
VSX1-203ENST00000409285 PAPPA-AS1Q5QFB9 102 aa13.8□□□□□ -0.2
VSX1-203ENST00000409285 Q6ZUT4 128 aa13.8□□□□□ -0.2
VSX1-203ENST00000409285 ATP5LO75964 103 aa13.8□□□□□ -0.2
VSX1-203ENST00000409285 LINC00269Q8N2A0 174 aa13.8□□□□□ -0.2
VSX1-203ENST00000409285 PACRGQ96M98 296 aaPredicted RBP13.8□□□□□ -0.2
VSX1-203ENST00000409285 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.79□□□□□ -0.2
VSX1-203ENST00000409285 REG3AQ06141 175 aa13.78□□□□□ -0.2
VSX1-203ENST00000409285 Q6ZN92 141 aa13.78□□□□□ -0.2
VSX1-203ENST00000409285 AMELXQ99217 191 aa13.78□□□□□ -0.2
VSX1-203ENST00000409285 TRAV8-3A0A0A6YYJ7 113 aa13.77□□□□□ -0.21
VSX1-203ENST00000409285 LEPROTL1O95214 131 aa13.77□□□□□ -0.21
VSX1-203ENST00000409285 CRPP02741 224 aa13.77□□□□□ -0.21
VSX1-203ENST00000409285 MIAQ16674 131 aa13.77□□□□□ -0.21
VSX1-203ENST00000409285 ENHOQ6UWT2 76 aa13.77□□□□□ -0.21
VSX1-203ENST00000409285 OPRPNQ99935 248 aaPredicted RBP13.77□□□□□ -0.21
VSX1-203ENST00000409285 LINC00173Q6ZV60 143 aa13.76□□□□□ -0.21
VSX1-203ENST00000409285 TEX43Q6ZNM6 134 aa13.75□□□□□ -0.21
VSX1-203ENST00000409285 UBE2WQ96B02 151 aa13.75□□□□□ -0.21
VSX1-203ENST00000409285 HSPB8Q9UJY1 196 aa13.75□□□□□ -0.21
VSX1-203ENST00000409285 TRAV8-4A0A0B4J246 113 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 CCL25O15444 150 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 BAALCQ8WXS3 180 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 VCX2Q9H322 139 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 DNAH2Q9P225 4427 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 LOC105371267A0A1B0GV96 52 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 RNASE13Q5GAN3 156 aaKnown RBP13.74□□□□□ -0.21
VSX1-203ENST00000409285 OR10D4PQ8NGN7 298 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 IFI27L1Q96BM0 104 aa13.74□□□□□ -0.21
VSX1-203ENST00000409285 FRAS1Q86XX4 4008 aa13.73□□□□□ -0.21
VSX1-203ENST00000409285 CLPSL2Q6UWE3 100 aa13.73□□□□□ -0.21
VSX1-203ENST00000409285 C2orf88Q9BSF0 95 aa13.73□□□□□ -0.21
VSX1-203ENST00000409285 DNAH10Q8IVF4 4471 aa13.72□□□□□ -0.21
VSX1-203ENST00000409285 LINC00959A0A1B0GUT2 108 aa13.72□□□□□ -0.21
VSX1-203ENST00000409285 PMVKQ15126 192 aa13.72□□□□□ -0.21
VSX1-203ENST00000409285 M0R2N4 97 aa13.71□□□□□ -0.21
VSX1-203ENST00000409285 AKR1D1P51857 326 aa13.71□□□□□ -0.21
VSX1-203ENST00000409285 FAM19A3Q7Z5A8 133 aa13.71□□□□□ -0.21
VSX1-203ENST00000409285 NFE4Q86UQ8 179 aa13.71□□□□□ -0.21
VSX1-203ENST00000409285 KRTDAPP60985 99 aa13.7□□□□□ -0.22
VSX1-203ENST00000409285 RMI2Q96E14 147 aa13.7□□□□□ -0.22
VSX1-203ENST00000409285 CST9LQ9H4G1 147 aa13.7□□□□□ -0.22
VSX1-203ENST00000409285 TRAV12-1A0A0B4J245 112 aa13.69□□□□□ -0.22
VSX1-203ENST00000409285 UBE2D1P51668 147 aa13.69□□□□□ -0.22
VSX1-203ENST00000409285 COX11Q9Y6N1 276 aa13.69□□□□□ -0.22
VSX1-203ENST00000409285 SS18Q15532 418 aa13.68□□□□□ -0.22
VSX1-203ENST00000409285 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
VSX1-203ENST00000409285 C1orf43Q9BWL3 253 aa13.68□□□□□ -0.22
VSX1-203ENST00000409285 MAP1LC3CQ9BXW4 147 aa13.68□□□□□ -0.22
VSX1-203ENST00000409285 Q9HAA7 133 aa13.68□□□□□ -0.22
VSX1-203ENST00000409285 TRAV13-1A0A0B4J241 112 aa13.67□□□□□ -0.22
VSX1-203ENST00000409285 IGKV3OR2-268A0A0C4DH90 116 aa13.67□□□□□ -0.22
VSX1-203ENST00000409285 ZC2HC1BQ5TFG8 222 aa13.67□□□□□ -0.22
VSX1-203ENST00000409285 Q6ZRN7 208 aaPredicted RBP13.67□□□□□ -0.22
VSX1-203ENST00000409285 PRSS1P07477 247 aa13.67□□□□□ -0.22
VSX1-203ENST00000409285 C3orf79P0CE67 100 aa13.67□□□□□ -0.22
VSX1-203ENST00000409285 KRTAP26-1Q6PEX3 210 aa13.67□□□□□ -0.22
VSX1-203ENST00000409285 TM2D2Q9BX73 214 aa13.67□□□□□ -0.22
VSX1-203ENST00000409285 PRSS29PA6NIE9 313 aa13.66□□□□□ -0.22
VSX1-203ENST00000409285 H0Y8G0 127 aa13.66□□□□□ -0.22
VSX1-203ENST00000409285 C1orf134Q5TEV5 83 aa13.66□□□□□ -0.22
VSX1-203ENST00000409285 SPATA12Q7Z6I5 190 aa13.66□□□□□ -0.22
VSX1-203ENST00000409285 CHCHD10Q8WYQ3 142 aaPredicted RBP13.66□□□□□ -0.22
VSX1-203ENST00000409285 IGLV10-54A0A075B6I4 117 aa13.65□□□□□ -0.22
VSX1-203ENST00000409285 SEC11AP67812 179 aa13.65□□□□□ -0.22
VSX1-203ENST00000409285 LINC00242Q5T6M2 205 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms