RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 IFITM1P13164 125 aa13.28□□□□□ -0.28
EWSR1-207ENST00000406548 Q6ZSV7 163 aa13.28□□□□□ -0.28
EWSR1-207ENST00000406548 IL17DQ8TAD2 202 aa13.28□□□□□ -0.28
EWSR1-207ENST00000406548 IGHV3OR16-12A0A075B7B8 117 aa13.27□□□□□ -0.28
EWSR1-207ENST00000406548 COX6CP09669 75 aa13.27□□□□□ -0.28
EWSR1-207ENST00000406548 DEFB113Q30KQ7 82 aa13.27□□□□□ -0.28
EWSR1-207ENST00000406548 FAM208BQ5VWN6 2430 aa13.27□□□□□ -0.29
EWSR1-207ENST00000406548 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
EWSR1-207ENST00000406548 RPL13AP40429 203 aaKnown RBP13.26□□□□□ -0.29
EWSR1-207ENST00000406548 COX6A2Q02221 97 aa13.26□□□□□ -0.29
EWSR1-207ENST00000406548 STHQ8IWL8 128 aa13.26□□□□□ -0.29
EWSR1-207ENST00000406548 C1orf158Q8N1D5 194 aa13.26□□□□□ -0.29
EWSR1-207ENST00000406548 HERVK_113P63121 156 aa13.25□□□□□ -0.29
EWSR1-207ENST00000406548 DAND5Q8N907 189 aa13.25□□□□□ -0.29
EWSR1-207ENST00000406548 MYO9AB2RTY4 2548 aa13.25□□□□□ -0.29
EWSR1-207ENST00000406548 Q96MF0 132 aa13.25□□□□□ -0.29
EWSR1-207ENST00000406548 TRAV25A0A0B4J276 109 aa13.24□□□□□ -0.29
EWSR1-207ENST00000406548 LINC00242Q5T6M2 205 aa13.24□□□□□ -0.29
EWSR1-207ENST00000406548 CENPEQ02224 2701 aa13.24□□□□□ -0.29
EWSR1-207ENST00000406548 IGLV5-39A0A0G2JS06 123 aa13.24□□□□□ -0.29
EWSR1-207ENST00000406548 TEX49A0A1B0GTD5 131 aa13.24□□□□□ -0.29
EWSR1-207ENST00000406548 LRRC75A-AS1Q8N1F1 130 aa13.24□□□□□ -0.29
EWSR1-207ENST00000406548 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
EWSR1-207ENST00000406548 TEX15Q9BXT5 2789 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 LRRK2Q5S007 2527 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 LINC00694P0DN24 101 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 CIRBPQ14011 172 aaKnown RBP13.23□□□□□ -0.29
EWSR1-207ENST00000406548 C2orf82Q6UX34 121 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 PTPN13Q12923 2485 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 H7C423 109 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 K7EQD1 137 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 FAM19A3Q7Z5A8 133 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 CLEC2BQ92478 149 aa13.23□□□□□ -0.29
EWSR1-207ENST00000406548 H3BT86 120 aa13.22□□□□□ -0.29
EWSR1-207ENST00000406548 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
EWSR1-207ENST00000406548 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
EWSR1-207ENST00000406548 Q9H8V8 135 aa13.22□□□□□ -0.29
EWSR1-207ENST00000406548 AKAP9Q99996 3911 aa13.21□□□□□ -0.29
EWSR1-207ENST00000406548 TRBV10-1A0A0K0K1A3 114 aa13.21□□□□□ -0.29
EWSR1-207ENST00000406548 LST1O00453 97 aa13.21□□□□□ -0.29
EWSR1-207ENST00000406548 TMEM86BQ8N661 226 aa13.21□□□□□ -0.29
EWSR1-207ENST00000406548 NAV2Q8IVL1 2488 aa13.21□□□□□ -0.29
EWSR1-207ENST00000406548 CITED1Q99966 193 aa13.21□□□□□ -0.29
EWSR1-207ENST00000406548 CSDC2Q9Y534 153 aaKnown RBP13.21□□□□□ -0.29
EWSR1-207ENST00000406548 DAZ2Q13117 558 aaKnown RBP13.2□□□□□ -0.3
EWSR1-207ENST00000406548 Q6ZTI0 123 aa13.2□□□□□ -0.3
EWSR1-207ENST00000406548 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
EWSR1-207ENST00000406548 LINC00308Q8TCZ7 52 aa13.2□□□□□ -0.3
EWSR1-207ENST00000406548 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
EWSR1-207ENST00000406548 TRAV8-4A0A0B4J246 113 aa13.2□□□□□ -0.3
EWSR1-207ENST00000406548 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
EWSR1-207ENST00000406548 NDUFA7O95182 113 aa13.2□□□□□ -0.3
EWSR1-207ENST00000406548 NTM-AS1Q6ZSK4 140 aa13.2□□□□□ -0.3
EWSR1-207ENST00000406548 TRAV4A0A0B4J268 109 aa13.19□□□□□ -0.3
EWSR1-207ENST00000406548 A0A1W2PRX2 142 aa13.19□□□□□ -0.3
EWSR1-207ENST00000406548 CITED2Q99967 270 aaPredicted RBP13.19□□□□□ -0.3
EWSR1-207ENST00000406548 TRAV13-1A0A0B4J241 112 aa13.18□□□□□ -0.3
EWSR1-207ENST00000406548 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
EWSR1-207ENST00000406548 ZNF625Q96I27 306 aaPredicted RBP13.18□□□□□ -0.3
EWSR1-207ENST00000406548 KRTAP1-3Q8IUG1 177 aa13.17□□□□□ -0.3
EWSR1-207ENST00000406548 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
EWSR1-207ENST00000406548 ABCA12Q86UK0 2595 aa13.17□□□□□ -0.3
EWSR1-207ENST00000406548 GAGE12JA6NER3 117 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 DNAJC9-AS1A6NH13 148 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 CCL24O00175 119 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 SNCGO76070 127 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 GAGE4Q13068 117 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 GAGE5Q13069 117 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 CHD6Q8TD26 2715 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 CDC42SE2Q9NRR3 84 aa13.16□□□□□ -0.3
EWSR1-207ENST00000406548 A0A0U1RRA0 63 aa13.15□□□□□ -0.3
EWSR1-207ENST00000406548 COPS9Q8WXC6 57 aa13.15□□□□□ -0.3
EWSR1-207ENST00000406548 TRAV26-1A0A087WT03 109 aa13.15□□□□□ -0.31
EWSR1-207ENST00000406548 PRIMA1Q86XR5 153 aa13.15□□□□□ -0.31
EWSR1-207ENST00000406548 F5H768 121 aa13.14□□□□□ -0.31
EWSR1-207ENST00000406548 SOSTDC1Q6X4U4 206 aa13.14□□□□□ -0.31
EWSR1-207ENST00000406548 NOP10Q9NPE3 64 aaKnown RBP13.14□□□□□ -0.31
EWSR1-207ENST00000406548 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
EWSR1-207ENST00000406548 CRLF1O75462 422 aa13.13□□□□□ -0.31
EWSR1-207ENST00000406548 ANAPC13Q9BS18 74 aa13.13□□□□□ -0.31
EWSR1-207ENST00000406548 WNK1Q9H4A3 2382 aa13.12□□□□□ -0.31
EWSR1-207ENST00000406548 UBE2L6O14933 153 aa13.12□□□□□ -0.31
EWSR1-207ENST00000406548 GAGE2BQ13066 116 aa13.12□□□□□ -0.31
EWSR1-207ENST00000406548 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
EWSR1-207ENST00000406548 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
EWSR1-207ENST00000406548 ZNF469Q96JG9 3925 aaPredicted RBP13.12□□□□□ -0.31
EWSR1-207ENST00000406548 PLA2G2AP14555 144 aa13.11□□□□□ -0.31
EWSR1-207ENST00000406548 TMEM243Q9BU79 118 aa13.11□□□□□ -0.31
EWSR1-207ENST00000406548 KMT2BQ9UMN6 2715 aaPredicted RBP13.11□□□□□ -0.31
EWSR1-207ENST00000406548 COX7A2LO14548 114 aa13.11□□□□□ -0.31
EWSR1-207ENST00000406548 HERV-K104P63124 156 aa13.11□□□□□ -0.31
EWSR1-207ENST00000406548 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
EWSR1-207ENST00000406548 GIG44P09565 113 aaPredicted RBP13.1□□□□□ -0.31
EWSR1-207ENST00000406548 ESM1Q9NQ30 184 aa13.1□□□□□ -0.31
EWSR1-207ENST00000406548 TLN2Q9Y4G6 2542 aa13.1□□□□□ -0.31
EWSR1-207ENST00000406548 C15orf53Q8NAA6 179 aa13.09□□□□□ -0.31
EWSR1-207ENST00000406548 C16orf74Q96GX8 76 aa13.09□□□□□ -0.31
EWSR1-207ENST00000406548 PLAC8L1A1L4L8 177 aa13.09□□□□□ -0.31
EWSR1-207ENST00000406548 SHISA2Q6UWI4 295 aa13.09□□□□□ -0.31
EWSR1-207ENST00000406548 FAM240AA0A1B0GVK7 77 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms