RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 Q6ZUT4 128 aa11.45□□□□□ -0.58
PARVB-204ENST00000406477 PRIMA1Q86XR5 153 aa11.45□□□□□ -0.58
PARVB-204ENST00000406477 PLEKHB2Q96CS7 222 aa11.45□□□□□ -0.58
PARVB-204ENST00000406477 TMEM101Q96IK0 257 aa11.45□□□□□ -0.58
PARVB-204ENST00000406477 TEX48A0A1B0GUV7 120 aa11.44□□□□□ -0.58
PARVB-204ENST00000406477 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
PARVB-204ENST00000406477 OXLD1Q5BKU9 147 aa11.44□□□□□ -0.58
PARVB-204ENST00000406477 JMJD1CQ15652 2540 aa11.44□□□□□ -0.58
PARVB-204ENST00000406477 LGALS3P17931 250 aaKnown RBP11.43□□□□□ -0.58
PARVB-204ENST00000406477 TIRAPP58753 221 aa11.43□□□□□ -0.58
PARVB-204ENST00000406477 AMMECR1LQ6DCA0 310 aa11.43□□□□□ -0.58
PARVB-204ENST00000406477 OR5A1Q8NGJ0 315 aa11.43□□□□□ -0.58
PARVB-204ENST00000406477 LOC100131303A0A0U1RQF7 123 aa11.42□□□□□ -0.58
PARVB-204ENST00000406477 SPART-AS1P0CW21 52 aa11.42□□□□□ -0.58
PARVB-204ENST00000406477 UBE2D1P51668 147 aa11.42□□□□□ -0.58
PARVB-204ENST00000406477 DAD1P61803 113 aa11.42□□□□□ -0.58
PARVB-204ENST00000406477 Q8NAQ8 132 aa11.42□□□□□ -0.58
PARVB-204ENST00000406477 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
PARVB-204ENST00000406477 COX11Q9Y6N1 276 aa11.42□□□□□ -0.58
PARVB-204ENST00000406477 J3QQQ9 107 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 SCGB1D4Q6XE38 83 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 TM2D2Q9BX73 214 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 TRBV6-8A0A0A6YYG3 113 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 H3BRM9 83 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 GYPEP15421 78 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 GCSHP23434 173 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 FAM19A3Q7Z5A8 133 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 CEND1Q8N111 149 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 ATP6V0E2Q8NHE4 81 aa11.41□□□□□ -0.58
PARVB-204ENST00000406477 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.58
PARVB-204ENST00000406477 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
PARVB-204ENST00000406477 HIST1H4GQ99525 98 aa11.4□□□□□ -0.58
PARVB-204ENST00000406477 CDC42SE2Q9NRR3 84 aa11.4□□□□□ -0.58
PARVB-204ENST00000406477 TAX1BP3O14907 124 aa11.39□□□□□ -0.59
PARVB-204ENST00000406477 PAX4O43316 350 aa11.39□□□□□ -0.59
PARVB-204ENST00000406477 ATP5G1P05496 136 aa11.39□□□□□ -0.59
PARVB-204ENST00000406477 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
PARVB-204ENST00000406477 HERVK_113P63121 156 aa11.39□□□□□ -0.59
PARVB-204ENST00000406477 IGLV5-45A0A087WSX0 123 aa11.38□□□□□ -0.59
PARVB-204ENST00000406477 PTTG1IPP53801 180 aa11.38□□□□□ -0.59
PARVB-204ENST00000406477 LINC00469Q8N7U9 141 aa11.38□□□□□ -0.59
PARVB-204ENST00000406477 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
PARVB-204ENST00000406477 ATRQ13535 2644 aa11.37□□□□□ -0.59
PARVB-204ENST00000406477 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
PARVB-204ENST00000406477 DEFB4AO15263 64 aa11.36□□□□□ -0.59
PARVB-204ENST00000406477 SMIM13P0DJ93 91 aa11.36□□□□□ -0.59
PARVB-204ENST00000406477 CHCHD5Q9BSY4 110 aa11.36□□□□□ -0.59
PARVB-204ENST00000406477 A0A0J9YY99 117 aa11.35□□□□□ -0.59
PARVB-204ENST00000406477 IGHV3-30-3P0DP02 117 aa11.35□□□□□ -0.59
PARVB-204ENST00000406477 TSPEAR-AS2P59090 65 aa11.35□□□□□ -0.59
PARVB-204ENST00000406477 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
PARVB-204ENST00000406477 SH2D6Q7Z4S9 175 aa11.35□□□□□ -0.59
PARVB-204ENST00000406477 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
PARVB-204ENST00000406477 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
PARVB-204ENST00000406477 TMEM238LA0A1B0GVL6 79 aa11.34□□□□□ -0.59
PARVB-204ENST00000406477 A6NJY4 79 aa11.34□□□□□ -0.59
PARVB-204ENST00000406477 FXYD2P54710 66 aa11.34□□□□□ -0.59
PARVB-204ENST00000406477 GAGE6Q13070 117 aa11.34□□□□□ -0.59
PARVB-204ENST00000406477 LINC00242Q5T6M2 205 aa11.33□□□□□ -0.6
PARVB-204ENST00000406477 C9orf118A6NHY6 69 aa11.33□□□□□ -0.6
PARVB-204ENST00000406477 CELA1Q9UNI1 258 aa11.33□□□□□ -0.6
PARVB-204ENST00000406477 IGHV3-64A0A075B6Q5 118 aa11.32□□□□□ -0.6
PARVB-204ENST00000406477 TRAV13-1A0A0B4J241 112 aa11.32□□□□□ -0.6
PARVB-204ENST00000406477 F5H768 121 aa11.32□□□□□ -0.6
PARVB-204ENST00000406477 CDKN2A-AS1Q9UH64 79 aa11.32□□□□□ -0.6
PARVB-204ENST00000406477 A0A1B0GUV1 79 aa11.31□□□□□ -0.6
PARVB-204ENST00000406477 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
PARVB-204ENST00000406477 VAMP3Q15836 100 aa11.31□□□□□ -0.6
PARVB-204ENST00000406477 MRPL23Q16540 153 aaKnown RBP11.31□□□□□ -0.6
PARVB-204ENST00000406477 SAMD5Q5TGI4 173 aa11.31□□□□□ -0.6
PARVB-204ENST00000406477 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
PARVB-204ENST00000406477 TMEM238C9JI98 176 aa11.3□□□□□ -0.6
PARVB-204ENST00000406477 C11orf68Q9H3H3 251 aaKnown RBP11.3□□□□□ -0.6
PARVB-204ENST00000406477 TENM1Q9UKZ4 2725 aa11.29□□□□□ -0.6
PARVB-204ENST00000406477 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
PARVB-204ENST00000406477 G3V4G9 280 aa11.29□□□□□ -0.6
PARVB-204ENST00000406477 ZFAND6Q6FIF0 208 aa11.29□□□□□ -0.6
PARVB-204ENST00000406477 Q6ZVH6 145 aa11.29□□□□□ -0.6
PARVB-204ENST00000406477 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
PARVB-204ENST00000406477 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
PARVB-204ENST00000406477 COX6A2Q02221 97 aa11.28□□□□□ -0.6
PARVB-204ENST00000406477 ICOSQ9Y6W8 199 aa11.28□□□□□ -0.6
PARVB-204ENST00000406477 IGLV5-39A0A0G2JS06 123 aa11.28□□□□□ -0.6
PARVB-204ENST00000406477 A0A1B0GWB2 263 aa11.28□□□□□ -0.6
PARVB-204ENST00000406477 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
PARVB-204ENST00000406477 UBE2V1Q13404 147 aa11.28□□□□□ -0.6
PARVB-204ENST00000406477 C12orf74Q32Q52 190 aa11.28□□□□□ -0.6
PARVB-204ENST00000406477 A0A0J9YXY3 114 aa11.27□□□□□ -0.61
PARVB-204ENST00000406477 CCL25O15444 150 aa11.27□□□□□ -0.61
PARVB-204ENST00000406477 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
PARVB-204ENST00000406477 K7EP13 123 aa11.26□□□□□ -0.61
PARVB-204ENST00000406477 HTN3P15516 51 aa11.26□□□□□ -0.61
PARVB-204ENST00000406477 C10orf126Q8N4M7 172 aa11.26□□□□□ -0.61
PARVB-204ENST00000406477 RAB37Q96AX2 223 aa11.26□□□□□ -0.61
PARVB-204ENST00000406477 VWFP04275 2813 aa11.26□□□□□ -0.61
PARVB-204ENST00000406477 H3BNG1 76 aa11.25□□□□□ -0.61
PARVB-204ENST00000406477 NDUFA1O15239 70 aa11.25□□□□□ -0.61
PARVB-204ENST00000406477 TIMM17BO60830 172 aa11.25□□□□□ -0.61
PARVB-204ENST00000406477 IGHV3-30P01768 117 aa11.25□□□□□ -0.61
PARVB-204ENST00000406477 IGHV3-30-5P0DP03 117 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms