RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 TTC32Q5I0X7 151 aa17.22■□□□□ 0.35
TRIOBP-203ENST00000403663 ODF3Q96PU9 254 aa17.22■□□□□ 0.35
TRIOBP-203ENST00000403663 TRRAPQ9Y4A5 3859 aa17.22■□□□□ 0.35
TRIOBP-203ENST00000403663 A0A087WWL8 130 aa17.22■□□□□ 0.35
TRIOBP-203ENST00000403663 TEX49A0A1B0GTD5 131 aa17.22■□□□□ 0.35
TRIOBP-203ENST00000403663 OPRPNQ99935 248 aaPredicted RBP17.21■□□□□ 0.35
TRIOBP-203ENST00000403663 COL6A5A8TX70 2615 aa17.2■□□□□ 0.34
TRIOBP-203ENST00000403663 F5H697 171 aa17.2■□□□□ 0.34
TRIOBP-203ENST00000403663 Q1RN00 199 aa17.2■□□□□ 0.34
TRIOBP-203ENST00000403663 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.2■□□□□ 0.34
TRIOBP-203ENST00000403663 PEMTQ9UBM1 199 aa17.2■□□□□ 0.34
TRIOBP-203ENST00000403663 TRAV8-4A0A0B4J246 113 aa17.19■□□□□ 0.34
TRIOBP-203ENST00000403663 TRBV7-9A0A0J9YWB2 115 aa17.19■□□□□ 0.34
TRIOBP-203ENST00000403663 TRBV6-5A0A0K0K1A5 114 aa17.19■□□□□ 0.34
TRIOBP-203ENST00000403663 TRBV10-2A0A0K0K1G8 114 aa17.19■□□□□ 0.34
TRIOBP-203ENST00000403663 IGHV3-64A0A075B6Q5 118 aa17.18■□□□□ 0.34
TRIOBP-203ENST00000403663 ZNF22P17026 224 aaPredicted RBP17.18■□□□□ 0.34
TRIOBP-203ENST00000403663 SPATA3Q8NHX4 192 aa17.18■□□□□ 0.34
TRIOBP-203ENST00000403663 DCANP1Q8TF63 244 aa17.18■□□□□ 0.34
TRIOBP-203ENST00000403663 TRBV30A0A0K0K1B3 111 aa17.17■□□□□ 0.34
TRIOBP-203ENST00000403663 M0R2P5 195 aa17.17■□□□□ 0.34
TRIOBP-203ENST00000403663 ZNF256Q9Y2P7 627 aaPredicted RBP17.17■□□□□ 0.34
TRIOBP-203ENST00000403663 C15orf53Q8NAA6 179 aa17.16■□□□□ 0.34
TRIOBP-203ENST00000403663 TRIAP1O43715 76 aa17.16■□□□□ 0.34
TRIOBP-203ENST00000403663 A0A0J9YX75 114 aa17.15■□□□□ 0.34
TRIOBP-203ENST00000403663 FAM159AQ6UWV7 190 aa17.15■□□□□ 0.34
TRIOBP-203ENST00000403663 KLLNB2CW77 178 aa17.15■□□□□ 0.34
TRIOBP-203ENST00000403663 H3BMM0 161 aa17.15■□□□□ 0.34
TRIOBP-203ENST00000403663 TMEM61Q8N0U2 210 aa17.15■□□□□ 0.34
TRIOBP-203ENST00000403663 UBE2WQ96B02 151 aa17.15■□□□□ 0.34
TRIOBP-203ENST00000403663 A0A0J9YXY3 114 aa17.14■□□□□ 0.33
TRIOBP-203ENST00000403663 NOTCH3Q9UM47 2321 aa17.14■□□□□ 0.33
TRIOBP-203ENST00000403663 DEFB114Q30KQ6 69 aa17.13■□□□□ 0.33
TRIOBP-203ENST00000403663 RHOHQ15669 191 aa17.13■□□□□ 0.33
TRIOBP-203ENST00000403663 FAM74A4Q5TZK3 123 aa17.13■□□□□ 0.33
TRIOBP-203ENST00000403663 DYNLRB2Q8TF09 96 aa17.12■□□□□ 0.33
TRIOBP-203ENST00000403663 A0A0J9YXV3 536 aa17.12■□□□□ 0.33
TRIOBP-203ENST00000403663 PF4P02776 101 aa17.12■□□□□ 0.33
TRIOBP-203ENST00000403663 LINC00482Q8N8I6 264 aa17.11■□□□□ 0.33
TRIOBP-203ENST00000403663 MDFICQ9P1T7 246 aa17.11■□□□□ 0.33
TRIOBP-203ENST00000403663 K7EQG2 157 aa17.1■□□□□ 0.33
TRIOBP-203ENST00000403663 M0QY20 66 aa17.1■□□□□ 0.33
TRIOBP-203ENST00000403663 C2orf82Q6UX34 121 aa17.1■□□□□ 0.33
TRIOBP-203ENST00000403663 LITAFQ99732 161 aa17.1■□□□□ 0.33
TRIOBP-203ENST00000403663 H7C423 109 aa17.09■□□□□ 0.33
TRIOBP-203ENST00000403663 FAM110AQ9BQ89 295 aa17.09■□□□□ 0.33
TRIOBP-203ENST00000403663 C20orf203Q8NBC4 194 aa17.09■□□□□ 0.33
TRIOBP-203ENST00000403663 ZNF56Q15929 161 aa17.08■□□□□ 0.32
TRIOBP-203ENST00000403663 ICOSQ9Y6W8 199 aa17.08■□□□□ 0.32
TRIOBP-203ENST00000403663 PKD1L1Q8TDX9 2849 aa17.08■□□□□ 0.32
TRIOBP-203ENST00000403663 IGLV4-3A0A075B6K6 122 aa17.07■□□□□ 0.32
TRIOBP-203ENST00000403663 IGHV3-30-3P0DP02 117 aa17.07■□□□□ 0.32
TRIOBP-203ENST00000403663 TRAV12-3A0A0B4J271 114 aa17.07■□□□□ 0.32
TRIOBP-203ENST00000403663 SMIM20Q8N5G0 67 aa17.07■□□□□ 0.32
TRIOBP-203ENST00000403663 H3BT86 120 aa17.05■□□□□ 0.32
TRIOBP-203ENST00000403663 MRPL23Q16540 153 aaKnown RBP17.05■□□□□ 0.32
TRIOBP-203ENST00000403663 C9orf85Q96MD7 179 aa17.05■□□□□ 0.32
TRIOBP-203ENST00000403663 SPXQ9BT56 116 aa17.05■□□□□ 0.32
TRIOBP-203ENST00000403663 PRSS2P07478 247 aa17.04■□□□□ 0.32
TRIOBP-203ENST00000403663 IGHV3-16A0A0C4DH30 117 aa17.04■□□□□ 0.32
TRIOBP-203ENST00000403663 HERV-K104P63124 156 aa17.04■□□□□ 0.32
TRIOBP-203ENST00000403663 ADAMTSL4-AS1Q5T5F5 129 aa17.04■□□□□ 0.32
TRIOBP-203ENST00000403663 ID1P41134 155 aa17.03■□□□□ 0.32
TRIOBP-203ENST00000403663 SHISA2Q6UWI4 295 aa17.03■□□□□ 0.32
TRIOBP-203ENST00000403663 TIMM21Q9BVV7 248 aa17.03■□□□□ 0.32
TRIOBP-203ENST00000403663 SPANXA1Q9NS26 97 aa17.03■□□□□ 0.32
TRIOBP-203ENST00000403663 FAM240AA0A1B0GVK7 77 aa17.02■□□□□ 0.31
TRIOBP-203ENST00000403663 I3L3M4 83 aa17.02■□□□□ 0.31
TRIOBP-203ENST00000403663 IGLV1-51P01701 117 aa17.02■□□□□ 0.31
TRIOBP-203ENST00000403663 C3orf56Q8N813 242 aa17.02■□□□□ 0.31
TRIOBP-203ENST00000403663 COX6CP09669 75 aa17.01■□□□□ 0.31
TRIOBP-203ENST00000403663 CLEC2BQ92478 149 aa17.01■□□□□ 0.31
TRIOBP-203ENST00000403663 SPANXDQ9BXN6 97 aa17.01■□□□□ 0.31
TRIOBP-203ENST00000403663 SPANXCQ9NY87 97 aa17.01■□□□□ 0.31
TRIOBP-203ENST00000403663 TRAV8-3A0A0A6YYJ7 113 aa17.01■□□□□ 0.31
TRIOBP-203ENST00000403663 SNRPD3P62318 126 aaKnown RBP17.01■□□□□ 0.31
TRIOBP-203ENST00000403663 DEFB121Q5J5C9 76 aa17.01■□□□□ 0.31
TRIOBP-203ENST00000403663 MEIG1Q5JSS6 88 aa17■□□□□ 0.31
TRIOBP-203ENST00000403663 MRPS36P82909 103 aaKnown RBP16.99■□□□□ 0.31
TRIOBP-203ENST00000403663 FAM104AQ969W3 186 aa16.99■□□□□ 0.31
TRIOBP-203ENST00000403663 LST1O00453 97 aa16.98■□□□□ 0.31
TRIOBP-203ENST00000403663 DEFB131AP59861 70 aa16.98■□□□□ 0.31
TRIOBP-203ENST00000403663 MIAQ16674 131 aa16.98■□□□□ 0.31
TRIOBP-203ENST00000403663 IGHV1-58A0A0C4DH39 117 aa16.97■□□□□ 0.31
TRIOBP-203ENST00000403663 CFAP161Q6P656 301 aa16.97■□□□□ 0.31
TRIOBP-203ENST00000403663 MAP6D1Q9H9H5 199 aa16.97■□□□□ 0.31
TRIOBP-203ENST00000403663 NDUFA12Q9UI09 145 aa16.97■□□□□ 0.31
TRIOBP-203ENST00000403663 TRAV25A0A0B4J276 109 aa16.97■□□□□ 0.31
TRIOBP-203ENST00000403663 TRBV7-7A0A0K0K1E9 115 aa16.96■□□□□ 0.31
TRIOBP-203ENST00000403663 IGKV3-20P01619 116 aa16.96■□□□□ 0.31
TRIOBP-203ENST00000403663 CHCHD5Q9BSY4 110 aa16.96■□□□□ 0.31
TRIOBP-203ENST00000403663 TRAV12-2A0A075B6T6 113 aa16.96■□□□□ 0.3
TRIOBP-203ENST00000403663 KNCNA6PVL3 124 aa16.96■□□□□ 0.3
TRIOBP-203ENST00000403663 NPC2P61916 151 aa16.96■□□□□ 0.3
TRIOBP-203ENST00000403663 ODF3L2Q3SX64 289 aa16.96■□□□□ 0.3
TRIOBP-203ENST00000403663 PYGO1Q9Y3Y4 419 aa16.96■□□□□ 0.3
TRIOBP-203ENST00000403663 CMYA5Q8N3K9 4069 aa16.95■□□□□ 0.3
TRIOBP-203ENST00000403663 TRGV11A0A075B6L2 103 aa16.95■□□□□ 0.3
TRIOBP-203ENST00000403663 ANK2Q01484 3957 aa16.94■□□□□ 0.3
TRIOBP-203ENST00000403663 A8MZ25 164 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms