RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
PTPRM-203ENST00000400060 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
PTPRM-203ENST00000400060 A8MZ25 164 aa7.35□□□□□ -1.23
PTPRM-203ENST00000400060 COX7BP24311 80 aa7.35□□□□□ -1.23
PTPRM-203ENST00000400060 MED13LQ71F56 2210 aa7.35□□□□□ -1.23
PTPRM-203ENST00000400060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.34□□□□□ -1.233e-7■■■□□ 18.6
PTPRM-203ENST00000400060 PLCE1Q9P212 2302 aa7.34□□□□□ -1.23
PTPRM-203ENST00000400060 SEM1Q6ZVN7 128 aa7.34□□□□□ -1.23
PTPRM-203ENST00000400060 SLPIP03973 132 aa7.34□□□□□ -1.24
PTPRM-203ENST00000400060 EXPH5Q8NEV8 1989 aa7.34□□□□□ -1.24
PTPRM-203ENST00000400060 TECTAO75443 2155 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 PRR9Q5T870 116 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 COX17Q14061 63 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 C5orf56Q8N8D9 126 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 MSMPQ1L6U9 139 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 SMCR5Q8TEV8 140 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 RMI2Q96E14 147 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 MSMBP08118 114 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 Q8N814 137 aa7.33□□□□□ -1.24
PTPRM-203ENST00000400060 NTM-AS1Q6ZSK4 140 aa7.32□□□□□ -1.24
PTPRM-203ENST00000400060 TRBV6-4A0A1B0GX49 114 aa7.32□□□□□ -1.24
PTPRM-203ENST00000400060 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
PTPRM-203ENST00000400060 FHL2Q14192 279 aa7.32□□□□□ -1.24
PTPRM-203ENST00000400060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
PTPRM-203ENST00000400060 A0A087WYN8 130 aa7.32□□□□□ -1.24
PTPRM-203ENST00000400060 LINC00336Q6ZUF6 198 aa7.32□□□□□ -1.24
PTPRM-203ENST00000400060 NKAPP1Q8N9T2 125 aa7.32□□□□□ -1.24
PTPRM-203ENST00000400060 LINC01356Q8N9X3 169 aa7.31□□□□□ -1.24
PTPRM-203ENST00000400060 C16orf74Q96GX8 76 aa7.31□□□□□ -1.24
PTPRM-203ENST00000400060 C2orf48Q96LS8 159 aa7.31□□□□□ -1.24
PTPRM-203ENST00000400060 RUSC1-AS1Q66K80 236 aa7.31□□□□□ -1.24
PTPRM-203ENST00000400060 KLKP1Q107X0 134 aa7.31□□□□□ -1.24
PTPRM-203ENST00000400060 A6NED7 52 aa7.3□□□□□ -1.24
PTPRM-203ENST00000400060 LIMD2Q9BT23 127 aa7.3□□□□□ -1.24
PTPRM-203ENST00000400060 SRCAPQ6ZRS2 3230 aa7.3□□□□□ -1.24
PTPRM-203ENST00000400060 Q8N3U1 123 aa7.3□□□□□ -1.24
PTPRM-203ENST00000400060 PTPRSQ13332 1948 aa7.3□□□□□ -1.24
PTPRM-203ENST00000400060 SMIM1B2RUZ4 78 aa7.29□□□□□ -1.24
PTPRM-203ENST00000400060 CDK2AP2O75956 126 aa7.29□□□□□ -1.24
PTPRM-203ENST00000400060 FAM19A1Q7Z5A9 133 aa7.29□□□□□ -1.24
PTPRM-203ENST00000400060 APRG1Q8IVJ8 170 aa7.29□□□□□ -1.24
PTPRM-203ENST00000400060 LINC01547P58512 204 aaPredicted RBP7.29□□□□□ -1.24
PTPRM-203ENST00000400060 Q8N6K4 173 aa7.29□□□□□ -1.24
PTPRM-203ENST00000400060 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 IGF1P05019 195 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 Q6ZSV7 163 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 KIF25-AS1Q9Y6Z4 181 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 CLPSL1A2RUU4 121 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 CCL18P55774 89 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 MRGPRG-AS1Q2M3A8 158 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 CEP192Q8TEP8 1941 aa7.28□□□□□ -1.24
PTPRM-203ENST00000400060 CCL24O00175 119 aa7.27□□□□□ -1.24
PTPRM-203ENST00000400060 HILS1P60008 231 aa7.27□□□□□ -1.24
PTPRM-203ENST00000400060 ZFHX2Q9C0A1 2572 aaPredicted RBP7.27□□□□□ -1.25
PTPRM-203ENST00000400060 IGLV5-45A0A087WSX0 123 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 UBE2E2Q96LR5 201 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 CHCHD7Q9BUK0 85 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 PRO3102Q9H379 93 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 LINC00242Q5T6M2 205 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 Q6ZVQ6 151 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 ESM1Q9NQ30 184 aa7.27□□□□□ -1.25
PTPRM-203ENST00000400060 LITAFQ99732 161 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 ANKHD1Q8IWZ3 2542 aaKnown RBP7.26□□□□□ -1.25
PTPRM-203ENST00000400060 LINC01561Q8N1V8 128 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 LOC110117498A0A087WWA1 95 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 AGRNO00468 2067 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 K7EQG2 157 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 FBXL19-AS1Q494R0 122 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 UNQ9165/PRO28630Q6UXU0 137 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 DOPEY2Q9Y3R5 2298 aa7.26□□□□□ -1.25
PTPRM-203ENST00000400060 GRNP28799 593 aaKnown RBP7.25□□□□□ -1.25
PTPRM-203ENST00000400060 C6orf99Q4VX62 202 aa7.25□□□□□ -1.25
PTPRM-203ENST00000400060 VPREB1P12018 145 aa7.25□□□□□ -1.25
PTPRM-203ENST00000400060 PRR15LQ9BU68 103 aa7.25□□□□□ -1.25
PTPRM-203ENST00000400060 NOTCH3Q9UM47 2321 aa7.25□□□□□ -1.25
PTPRM-203ENST00000400060 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
PTPRM-203ENST00000400060 Q8IZM0 81 aa7.24□□□□□ -1.25
PTPRM-203ENST00000400060 F8W735 103 aaPredicted RBP7.24□□□□□ -1.25
PTPRM-203ENST00000400060 Q5XG85 94 aa7.24□□□□□ -1.25
PTPRM-203ENST00000400060 CDC42SE2Q9NRR3 84 aa7.23□□□□□ -1.25
PTPRM-203ENST00000400060 TNCP24821 2201 aa7.23□□□□□ -1.25
PTPRM-203ENST00000400060 ADAMTS20P59510 1910 aa7.23□□□□□ -1.25
PTPRM-203ENST00000400060 A0A1B0GW54 56 aa7.23□□□□□ -1.25
PTPRM-203ENST00000400060 DYSFO75923 2080 aa7.22□□□□□ -1.25
PTPRM-203ENST00000400060 ANGP03950 147 aaKnown RBP7.22□□□□□ -1.25
PTPRM-203ENST00000400060 LINC00315P59091 139 aa7.22□□□□□ -1.25
PTPRM-203ENST00000400060 NOP10Q9NPE3 64 aaKnown RBP7.22□□□□□ -1.25
PTPRM-203ENST00000400060 TET2Q6N021 2002 aaPredicted RBP7.22□□□□□ -1.25
PTPRM-203ENST00000400060 ARFGEF3Q5TH69 2177 aa7.21□□□□□ -1.25
PTPRM-203ENST00000400060 H7BZZ5 65 aa7.21□□□□□ -1.25
PTPRM-203ENST00000400060 ZNF580Q9UK33 172 aa7.21□□□□□ -1.25
PTPRM-203ENST00000400060 PRR14LQ5THK1 2151 aa7.21□□□□□ -1.25
PTPRM-203ENST00000400060 CASC2Q6XLA1 102 aa7.21□□□□□ -1.26
PTPRM-203ENST00000400060 hDV103S1A0JD37 113 aa7.21□□□□□ -1.26
PTPRM-203ENST00000400060 DEFB1P60022 68 aa7.21□□□□□ -1.26
PTPRM-203ENST00000400060 Q6ZQY7 126 aa7.21□□□□□ -1.26
PTPRM-203ENST00000400060 A0A087WZ39 114 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms