RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PKIGQ9Y2B9 76 aa10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 LINC00310P59036 64 aa10.5□□□□□ -0.73
PCDHGA11-201ENST00000398587 ETDCA0A1B0GVM5 59 aa10.5□□□□□ -0.73
PCDHGA11-201ENST00000398587 TRBV10-2A0A0K0K1G8 114 aa10.5□□□□□ -0.73
PCDHGA11-201ENST00000398587 RNASE8Q8TDE3 154 aaKnown RBP10.5□□□□□ -0.73
PCDHGA11-201ENST00000398587 A0A0B4J2C4 111 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 TIRAPP58753 221 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 HIST2H2BDQ6DRA6 164 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 CITED1Q99966 193 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 PRRC2CQ9Y520 2896 aaKnown RBP10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 GAS8-AS1O95177 125 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 MIFP14174 115 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 MRGPRG-AS1Q2M3A8 158 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 C9orf153Q5TBE3 101 aa10.49□□□□□ -0.73
PCDHGA11-201ENST00000398587 TSHBP01222 138 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 PIK3CD-AS1Q5SR53 167 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 LINC00482Q8N8I6 264 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 TRBV6-8A0A0A6YYG3 113 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 LINC00269Q8N2A0 174 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 ADAMTS20P59510 1910 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 RBMY1FQ15415 496 aaKnown RBP10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 SPANXB1Q9NS25 103 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 LECT2O14960 151 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 REG3AQ06141 175 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 POLQO75417 2590 aa10.48□□□□□ -0.73
PCDHGA11-201ENST00000398587 PLA2G2AP14555 144 aa10.47□□□□□ -0.73
PCDHGA11-201ENST00000398587 SPANXCQ9NY87 97 aa10.47□□□□□ -0.73
PCDHGA11-201ENST00000398587 CLEC2BQ92478 149 aa10.47□□□□□ -0.73
PCDHGA11-201ENST00000398587 FOXI1Q12951 378 aa10.47□□□□□ -0.73
PCDHGA11-201ENST00000398587 SHISA2Q6UWI4 295 aa10.46□□□□□ -0.74
PCDHGA11-201ENST00000398587 H3BQ85 93 aa10.45□□□□□ -0.74
PCDHGA11-201ENST00000398587 EPG5Q9HCE0 2579 aa10.45□□□□□ -0.74
PCDHGA11-201ENST00000398587 URB1-AS1Q96HZ7 61 aa10.45□□□□□ -0.74
PCDHGA11-201ENST00000398587 NCR3O14931 201 aa10.45□□□□□ -0.74
PCDHGA11-201ENST00000398587 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
PCDHGA11-201ENST00000398587 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
PCDHGA11-201ENST00000398587 CHCHD10Q8WYQ3 142 aaPredicted RBP10.44□□□□□ -0.74
PCDHGA11-201ENST00000398587 EDN2P20800 178 aa10.44□□□□□ -0.74
PCDHGA11-201ENST00000398587 ODF3L2Q3SX64 289 aa10.44□□□□□ -0.74
PCDHGA11-201ENST00000398587 UFSP1Q6NVU6 142 aa10.44□□□□□ -0.74
PCDHGA11-201ENST00000398587 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
PCDHGA11-201ENST00000398587 TCL1BO95988 128 aa10.43□□□□□ -0.74
PCDHGA11-201ENST00000398587 NDUFA7O95182 113 aa10.43□□□□□ -0.74
PCDHGA11-201ENST00000398587 Q8N976 141 aa10.43□□□□□ -0.74
PCDHGA11-201ENST00000398587 DIRC1Q969H9 104 aa10.43□□□□□ -0.74
PCDHGA11-201ENST00000398587 PRM2P04554 102 aa10.43□□□□□ -0.74
PCDHGA11-201ENST00000398587 C2orf91Q6ZV80 131 aa10.43□□□□□ -0.74
PCDHGA11-201ENST00000398587 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
PCDHGA11-201ENST00000398587 KIR2DL5BQ8NHK3 375 aa10.42□□□□□ -0.74
PCDHGA11-201ENST00000398587 PTH2Q96A98 100 aa10.42□□□□□ -0.74
PCDHGA11-201ENST00000398587 FUSP35637 526 aaKnown RBP eCLIP10.42□□□□□ -0.74
PCDHGA11-201ENST00000398587 LINC00308Q8TCZ7 52 aa10.41□□□□□ -0.74
PCDHGA11-201ENST00000398587 DEFB131BA0A096LNP1 70 aa10.41□□□□□ -0.74
PCDHGA11-201ENST00000398587 BBC3Q96PG8 261 aaPredicted RBP10.41□□□□□ -0.74
PCDHGA11-201ENST00000398587 RBX1P62877 108 aa10.41□□□□□ -0.74
PCDHGA11-201ENST00000398587 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
PCDHGA11-201ENST00000398587 TET2Q6N021 2002 aaPredicted RBP10.41□□□□□ -0.74
PCDHGA11-201ENST00000398587 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
PCDHGA11-201ENST00000398587 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
PCDHGA11-201ENST00000398587 G3V4G9 280 aa10.4□□□□□ -0.75
PCDHGA11-201ENST00000398587 IGHV4-28A0A0C4DH34 117 aa10.39□□□□□ -0.75
PCDHGA11-201ENST00000398587 IGIPA6NJ69 53 aa10.39□□□□□ -0.75
PCDHGA11-201ENST00000398587 HIGD2BQ4VC39 106 aa10.39□□□□□ -0.75
PCDHGA11-201ENST00000398587 TIMM17BO60830 172 aa10.38□□□□□ -0.75
PCDHGA11-201ENST00000398587 TMEM256-PLSCR3K7ERE1 68 aa10.38□□□□□ -0.75
PCDHGA11-201ENST00000398587 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
PCDHGA11-201ENST00000398587 ACANP16112 2415 aa10.38□□□□□ -0.75
PCDHGA11-201ENST00000398587 hADV29S1A0JD25 119 aa10.37□□□□□ -0.75
PCDHGA11-201ENST00000398587 IGLV1-51P01701 117 aa10.37□□□□□ -0.75
PCDHGA11-201ENST00000398587 UBE2D3P61077 147 aa10.37□□□□□ -0.75
PCDHGA11-201ENST00000398587 UBE2D2P62837 147 aa10.37□□□□□ -0.75
PCDHGA11-201ENST00000398587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
PCDHGA11-201ENST00000398587 FAM110AQ9BQ89 295 aa10.37□□□□□ -0.75
PCDHGA11-201ENST00000398587 TRACP01848 142 aa10.36□□□□□ -0.75
PCDHGA11-201ENST00000398587 LOC100131303A0A0U1RQF7 123 aa10.36□□□□□ -0.75
PCDHGA11-201ENST00000398587 ANKRD17O75179 2603 aaKnown RBP10.35□□□□□ -0.75
PCDHGA11-201ENST00000398587 RBM3P98179 157 aaKnown RBP10.35□□□□□ -0.75
PCDHGA11-201ENST00000398587 TRBV30A0A0K0K1B3 111 aa10.35□□□□□ -0.75
PCDHGA11-201ENST00000398587 A8MZ25 164 aa10.35□□□□□ -0.75
PCDHGA11-201ENST00000398587 COX7BP24311 80 aa10.35□□□□□ -0.75
PCDHGA11-201ENST00000398587 UBE2D1P51668 147 aa10.35□□□□□ -0.75
PCDHGA11-201ENST00000398587 SMR3AQ99954 134 aa10.35□□□□□ -0.75
PCDHGA11-201ENST00000398587 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
PCDHGA11-201ENST00000398587 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
PCDHGA11-201ENST00000398587 TRIAP1O43715 76 aa10.34□□□□□ -0.75
PCDHGA11-201ENST00000398587 IGKV3D-7A0A0C4DH55 119 aa10.33□□□□□ -0.76
PCDHGA11-201ENST00000398587 PDE6GP18545 87 aa10.33□□□□□ -0.76
PCDHGA11-201ENST00000398587 C16orf95Q9H693 158 aa10.33□□□□□ -0.76
PCDHGA11-201ENST00000398587 LELP1Q5T871 98 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 NREPQ16612 68 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 C14orf177Q52M58 125 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 C1orf158Q8N1D5 194 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 A0A096LNJ9 63 aa10.32□□□□□ -0.76
PCDHGA11-201ENST00000398587 PCSK5Q92824 1860 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms