RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 CHD3Q12873 2000 aaKnown RBP0.91□□□□□ -2.26
HMGN2P39-201ENST00000398005 RGPD4Q7Z3J3 1758 aa0.91□□□□□ -2.26
HMGN2P39-201ENST00000398005 EXPH5Q8NEV8 1989 aa0.9□□□□□ -2.26
HMGN2P39-201ENST00000398005 FN1P02751 2386 aaKnown RBP0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 PEAK1Q9H792 1746 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 KANTRA0A1W2PQU2 76 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 MGPP08493 103 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 SNRPFP62306 86 aaKnown RBP0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 NMSQ5H8A3 153 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 CFAP126Q5VTH2 177 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 C10orf99Q6UWK7 81 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 ZGRF1Q86YA3 2104 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 SMIM4Q8WVI0 70 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 FANCAO15360 1455 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 UNC13BO14795 1591 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 MYOM1P52179 1685 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 MYO18AQ92614 2054 aaKnown RBP0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 FREM1Q5H8C1 2179 aa0.9□□□□□ -2.27
HMGN2P39-201ENST00000398005 MAP3K1Q13233 1512 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 SUPT6HQ7KZ85 1726 aaKnown RBP0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 UNC13CQ8NB66 2214 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 DOCK10Q96BY6 2186 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 LOC285556D6RIA3 1793 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 COL4A1P02462 1669 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 COL4A4P53420 1690 aaPredicted RBP0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 DIP2CQ9Y2E4 1556 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 IQSEC2Q5JU85 1478 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 C7orf77A4D0Y5 90 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 F8WEM9 126 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 BCE1O60756 84 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 LY6G6CO95867 125 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 ZNF137PP52743 207 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 COX17Q14061 63 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 WFDC2Q14508 124 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 SPINK13Q1W4C9 94 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 PRR15LQ9BU68 103 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 WNK3Q9BYP7 1800 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 KIF14Q15058 1648 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 HMGXB3Q12766 1538 aa0.89□□□□□ -2.27
HMGN2P39-201ENST00000398005 PLXNA1Q9UIW2 1896 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 RGPD3A6NKT7 1758 aaPredicted RBP0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 ARHGEF5Q12774 1597 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 NRXN1Q9ULB1 1477 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 COL5A1P20908 1838 aaPredicted RBP0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 C10orf142B7Z368 130 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 D6R8Y8 96 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 J3QKU1 62 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 LEPROTL1O95214 131 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 ACYP1P07311 99 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 KRTAP6-3Q3LI67 103 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 MUSTN1Q8IVN3 82 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 FDCSPQ8NFU4 85 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 SMIM11BQ8TCY0 68 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 PLAC4Q8WY50 150 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 MYO3AQ8NEV4 1616 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 CDK13Q14004 1512 aaKnown RBP0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 SIPA1L3O60292 1781 aaPredicted RBP0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 PPLO60437 1756 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 COL4A6Q14031 1691 aa0.88□□□□□ -2.27
HMGN2P39-201ENST00000398005 POLA1P09884 1462 aaPredicted RBP0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 MAP3K4Q9Y6R4 1608 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 A0A087WVE0 104 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 H3BUT2 72 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 HMGN2P05204 90 aaKnown RBP0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 ARMS2P0C7Q2 107 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 LYNX1P0DP58 116 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 GCHFRP30047 84 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 SPINT3P49223 89 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 DEFA5Q01523 94 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 HMGN3Q15651 99 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 Q6ZRX8 168 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 LINC00643Q86TS7 51 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 SMCO4Q9NRQ5 59 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 PSENENQ9NZ42 101 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 ABCC2Q92887 1545 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 DCAF1Q9Y4B6 1507 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 KIF21AQ7Z4S6 1674 aa0.87□□□□□ -2.27
HMGN2P39-201ENST00000398005 IFT172Q9UG01 1749 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 NLRP1Q9C000 1473 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 TET1Q8NFU7 2136 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 ZMYM4Q5VZL5 1548 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 DLG5Q8TDM6 1919 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 SCN7AQ01118 1682 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 GVQW2A0A096LPI5 108 aaPredicted RBP0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 BVES-AS1Q5T3Y7 98 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 LCE1CQ5T751 118 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 LCE1BQ5T7P3 118 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 RTTNQ86VV8 2226 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 PCNX2A6NKB5 2137 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 ICE1Q9Y2F5 2266 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 ARFGEF3Q5TH69 2177 aa0.86□□□□□ -2.27
HMGN2P39-201ENST00000398005 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 A0A096LNT2 108 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 IQCF6A8MYZ5 107 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 PDCD5O14737 125 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 IGLC2P0DOY2 106 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 IGLC3P0DOY3 106 aa0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 RPL37P61927 97 aaKnown RBP0.85□□□□□ -2.27
HMGN2P39-201ENST00000398005 HAMPP81172 84 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms