RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 OPRPNQ99935 248 aaPredicted RBP3.72□□□□□ -1.81
SSR1-202ENST00000397511 DAZ1Q9NQZ3 744 aaKnown RBP3.72□□□□□ -1.81
SSR1-202ENST00000397511 U3KQE9 123 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 NDUFA4O00483 81 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 MSMBP08118 114 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 DEFB112Q30KQ8 113 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 C5orf38Q86SI9 138 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 C10orf105Q8TEF2 133 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 DPH3P1Q9H4G8 78 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 TP53TG1Q9Y2A0 90 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 APCP25054 2843 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 TRAV8-3A0A0A6YYJ7 113 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 IGHG2P01859 326 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 C11orf44Q8N8P7 122 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 CLEC2BQ92478 149 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 FLNAP21333 2647 aaKnown RBP3.71□□□□□ -1.81
SSR1-202ENST00000397511 SDHAF1A6NFY7 115 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 SOCS3O14543 225 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 SMCR5Q8TEV8 140 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 TRAV13-1A0A0B4J241 112 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 A0A0J9YX75 114 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 IGIPA6NJ69 53 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 KNCNA6PVL3 124 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 TSHBP01222 138 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 PRSS2P07478 247 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 RNASE13Q5GAN3 156 aaKnown RBP3.71□□□□□ -1.82
SSR1-202ENST00000397511 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 C18orf65Q6ZTR6 163 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 TIMM17AQ99595 171 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 PEMTQ9UBM1 199 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 NBEAL2Q6ZNJ1 2754 aa3.71□□□□□ -1.82
SSR1-202ENST00000397511 TMEM89A2RUT3 159 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 ZNF876PQ49A33 203 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 C19orf54Q5BKX5 351 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 Q5XG85 94 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 DSCR8Q96T75 97 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 NOTCH2Q04721 2471 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 A6NDX4 124 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 RNF223E7ERA6 249 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 PROK1P58294 105 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 HIST1H4AP62805 103 aaKnown RBP3.7□□□□□ -1.82
SSR1-202ENST00000397511 RPL18AQ02543 176 aaKnown RBP3.7□□□□□ -1.82
SSR1-202ENST00000397511 SUMO4Q6EEV6 95 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 PRORYQ9H606 182 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 PRO0628Q9UI54 55 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 ITPR3Q14573 2671 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 A0A0J9YXY3 114 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 I3L3M4 83 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 SDIM1Q6ZPB5 146 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 SERP2Q8N6R1 65 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 DCANP1Q8TF63 244 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 USMG5Q96IX5 58 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 Q9UF83 564 aa3.7□□□□□ -1.82
SSR1-202ENST00000397511 RHOHQ15669 191 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 MRPL53Q96EL3 112 aaKnown RBP3.69□□□□□ -1.82
SSR1-202ENST00000397511 FAM19A4Q96LR4 140 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 TIMM21Q9BVV7 248 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 PYGO1Q9Y3Y4 419 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 SETXQ7Z333 2677 aaKnown RBP3.69□□□□□ -1.82
SSR1-202ENST00000397511 FN1P02751 2386 aaKnown RBP3.69□□□□□ -1.82
SSR1-202ENST00000397511 IGHV4OR15-8A0A075B7B6 117 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 A0A087WW49 117 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 ADARB2-AS1A8MUL3 147 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 B4DSR2 109 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 OXTP01178 125 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 ZNF580Q9UK33 172 aa3.69□□□□□ -1.82
SSR1-202ENST00000397511 ITPR2Q14571 2701 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 IGHV3OR16-12A0A075B7B8 117 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 J3QLI3 93 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 VCYO14598 125 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 IGLV1-40P01703 118 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 INAFM2P0DMQ5 153 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 SLURP1P55000 103 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 KRTAP10-9P60411 292 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 DAND5Q8N907 189 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 LINC00315P59091 139 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 NPC2P61916 151 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 PSMB8P28062 276 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 HOXD3P31249 432 aaPredicted RBP3.68□□□□□ -1.82
SSR1-202ENST00000397511 SNRPD3P62318 126 aaKnown RBP3.68□□□□□ -1.82
SSR1-202ENST00000397511 MIAQ16674 131 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 APRG1Q8IVJ8 170 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 LENEPQ9Y5L5 61 aa3.68□□□□□ -1.82
SSR1-202ENST00000397511 GCN1Q92616 2671 aaKnown RBP3.68□□□□□ -1.82
SSR1-202ENST00000397511 TENM4Q6N022 2769 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 IGHV3-16A0A0C4DH30 117 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 IGHV3-38A0A0C4DH36 116 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 PFN2P35080 140 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 DAZ2Q13117 558 aaKnown RBP3.67□□□□□ -1.82
SSR1-202ENST00000397511 DAZ4Q86SG3 579 aaKnown RBP3.67□□□□□ -1.82
SSR1-202ENST00000397511 TMEM61Q8N0U2 210 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 UPK3BQ9BT76 320 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 DAZ3Q9NR90 486 aaKnown RBP3.67□□□□□ -1.82
SSR1-202ENST00000397511 KLLNB2CW77 178 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 DEFB131AP59861 70 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 NSUN5P1Q3KNT7 163 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 LITAFQ99732 161 aa3.67□□□□□ -1.82
SSR1-202ENST00000397511 KIF25-AS1Q9Y6Z4 181 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms