RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GAGE1Q13065 139 aa9.88□□□□□ -0.83
SEC13-208ENST00000397109 GAGE4Q13068 117 aa9.88□□□□□ -0.83
SEC13-208ENST00000397109 GAGE5Q13069 117 aa9.88□□□□□ -0.83
SEC13-208ENST00000397109 GAGE13Q4V321 117 aa9.88□□□□□ -0.83
SEC13-208ENST00000397109 DNAH11Q96DT5 4516 aa9.88□□□□□ -0.83
SEC13-208ENST00000397109 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
SEC13-208ENST00000397109 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
SEC13-208ENST00000397109 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
SEC13-208ENST00000397109 LINC00173Q6ZV60 143 aa9.87□□□□□ -0.83
SEC13-208ENST00000397109 KIR2DL4Q99706 377 aa9.87□□□□□ -0.83
SEC13-208ENST00000397109 HSBP1L1C9JCN9 74 aa9.86□□□□□ -0.83
SEC13-208ENST00000397109 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
SEC13-208ENST00000397109 ZNF56Q15929 161 aa9.86□□□□□ -0.83
SEC13-208ENST00000397109 SPATA45Q537H7 98 aa9.86□□□□□ -0.83
SEC13-208ENST00000397109 RPL39LQ96EH5 51 aaKnown RBP9.86□□□□□ -0.83
SEC13-208ENST00000397109 MIEN1Q9BRT3 115 aa9.86□□□□□ -0.83
SEC13-208ENST00000397109 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
SEC13-208ENST00000397109 PAM16Q9Y3D7 125 aa9.86□□□□□ -0.83
SEC13-208ENST00000397109 TRBV10-1A0A0K0K1A3 114 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 C16orf90A8MZG2 172 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 LINC00587B1AMM8 73 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
SEC13-208ENST00000397109 TOMM6Q96B49 74 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 DYNC1H1Q14204 4646 aaKnown RBP9.85□□□□□ -0.83
SEC13-208ENST00000397109 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 EREGO14944 169 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 TNFRSF18Q9Y5U5 241 aa9.85□□□□□ -0.83
SEC13-208ENST00000397109 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
SEC13-208ENST00000397109 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
SEC13-208ENST00000397109 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
SEC13-208ENST00000397109 Q9UF83 564 aa9.84□□□□□ -0.83
SEC13-208ENST00000397109 TRAV12-1A0A0B4J245 112 aa9.83□□□□□ -0.84
SEC13-208ENST00000397109 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
SEC13-208ENST00000397109 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.83□□□□□ -0.84
SEC13-208ENST00000397109 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
SEC13-208ENST00000397109 I3L3M4 83 aa9.82□□□□□ -0.84
SEC13-208ENST00000397109 PRSS1P07477 247 aa9.82□□□□□ -0.84
SEC13-208ENST00000397109 IGLC3P0DOY3 106 aa9.82□□□□□ -0.84
SEC13-208ENST00000397109 ERASQ7Z444 233 aa9.82□□□□□ -0.84
SEC13-208ENST00000397109 CYSLTR1Q9Y271 337 aa9.82□□□□□ -0.84
SEC13-208ENST00000397109 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
SEC13-208ENST00000397109 C2orf66Q6UXQ4 117 aa9.81□□□□□ -0.84
SEC13-208ENST00000397109 IGHV3-30P01768 117 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 IGHV3-33P01772 117 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 IGHV3-30-3P0DP02 117 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 IGHV3-30-5P0DP03 117 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 Q6ZN92 141 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 TMEM141Q96I45 108 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 SCGB3A1Q96QR1 104 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 PGPEP1Q9NXJ5 209 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 HERC2O95714 4834 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 KIAA1109Q2LD37 5005 aa9.8□□□□□ -0.84
SEC13-208ENST00000397109 NPSP0C0P6 89 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 UBE2D3P61077 147 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 UBE2D2P62837 147 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 ODF1Q14990 250 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 A0A087WX48 190 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 H0Y8G0 127 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 ATOH7Q8N100 152 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 PMCHL2Q9BQD1 86 aa9.79□□□□□ -0.84
SEC13-208ENST00000397109 A0A087WTM6 91 aa9.78□□□□□ -0.84
SEC13-208ENST00000397109 PSCAO43653 123 aa9.78□□□□□ -0.84
SEC13-208ENST00000397109 DPM2O94777 84 aa9.77□□□□□ -0.85
SEC13-208ENST00000397109 PLNP26678 52 aa9.77□□□□□ -0.85
SEC13-208ENST00000397109 PAPPA-AS1Q5QFB9 102 aa9.77□□□□□ -0.85
SEC13-208ENST00000397109 TM2D2Q9BX73 214 aa9.77□□□□□ -0.85
SEC13-208ENST00000397109 Q9HAA7 133 aa9.77□□□□□ -0.85
SEC13-208ENST00000397109 TRAV8-3A0A0A6YYJ7 113 aa9.76□□□□□ -0.85
SEC13-208ENST00000397109 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
SEC13-208ENST00000397109 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
SEC13-208ENST00000397109 IGKCP01834 107 aa9.76□□□□□ -0.85
SEC13-208ENST00000397109 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
SEC13-208ENST00000397109 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
SEC13-208ENST00000397109 F8VRH5 84 aa9.75□□□□□ -0.85
SEC13-208ENST00000397109 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
SEC13-208ENST00000397109 SLC25A34Q6PIV7 304 aa9.75□□□□□ -0.85
SEC13-208ENST00000397109 DAZ4Q86SG3 579 aaKnown RBP9.75□□□□□ -0.85
SEC13-208ENST00000397109 C20orf203Q8NBC4 194 aa9.75□□□□□ -0.85
SEC13-208ENST00000397109 DAZ3Q9NR90 486 aaKnown RBP9.75□□□□□ -0.85
SEC13-208ENST00000397109 PYGO1Q9Y3Y4 419 aa9.75□□□□□ -0.85
SEC13-208ENST00000397109 LRP1BQ9NZR2 4599 aa9.75□□□□□ -0.85
SEC13-208ENST00000397109 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
SEC13-208ENST00000397109 hDV102S1A0JD36 115 aa9.74□□□□□ -0.85
SEC13-208ENST00000397109 M0R143 59 aa9.74□□□□□ -0.85
SEC13-208ENST00000397109 DLEU1O43261 78 aa9.74□□□□□ -0.85
SEC13-208ENST00000397109 TSHBP01222 138 aa9.74□□□□□ -0.85
SEC13-208ENST00000397109 COX8AP10176 69 aa9.73□□□□□ -0.85
SEC13-208ENST00000397109 Q8N3U1 123 aa9.73□□□□□ -0.85
SEC13-208ENST00000397109 BAALCQ8WXS3 180 aa9.73□□□□□ -0.85
SEC13-208ENST00000397109 HNRNPA3P51991 378 aaKnown RBP9.72□□□□□ -0.85
SEC13-208ENST00000397109 PMVKQ15126 192 aa9.72□□□□□ -0.85
SEC13-208ENST00000397109 RMI2Q96E14 147 aa9.72□□□□□ -0.85
SEC13-208ENST00000397109 CHTOPQ9Y3Y2 248 aaKnown RBP9.72□□□□□ -0.85
SEC13-208ENST00000397109 COX11Q9Y6N1 276 aa9.72□□□□□ -0.85
SEC13-208ENST00000397109 LRCOL1A6NCL2 159 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms