RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 MIAQ16674 131 aa10.6□□□□□ -0.71
CLTA-203ENST00000396603 LINC01620Q4KN68 170 aa10.6□□□□□ -0.71
CLTA-203ENST00000396603 KIR2DL4Q99706 377 aa10.6□□□□□ -0.71
CLTA-203ENST00000396603 LAMTOR2Q9Y2Q5 125 aa10.6□□□□□ -0.71
CLTA-203ENST00000396603 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 D6R8Y8 96 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 SMKR1H3BMG3 65 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 H7C423 109 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 FCER1GP30273 86 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
CLTA-203ENST00000396603 POLR2KP53803 58 aaKnown RBP10.59□□□□□ -0.71
CLTA-203ENST00000396603 RPL32P62910 135 aaKnown RBP10.59□□□□□ -0.71
CLTA-203ENST00000396603 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 ENHOQ6UWT2 76 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 NRACQ8N912 160 aa10.59□□□□□ -0.71
CLTA-203ENST00000396603 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
CLTA-203ENST00000396603 SMAGPQ0VAQ4 97 aa10.58□□□□□ -0.72
CLTA-203ENST00000396603 GAGE6Q13070 117 aa10.58□□□□□ -0.72
CLTA-203ENST00000396603 TMEM136Q6ZRR5 245 aa10.58□□□□□ -0.72
CLTA-203ENST00000396603 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
CLTA-203ENST00000396603 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
CLTA-203ENST00000396603 MPV17L2Q567V2 206 aa10.57□□□□□ -0.72
CLTA-203ENST00000396603 PRR34Q9NV39 138 aa10.57□□□□□ -0.72
CLTA-203ENST00000396603 A0A1B0GUV1 79 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 GAS8-AS1O95177 125 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 MT-ND6P03923 174 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 RBX1P62877 108 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 PRELID3AQ96N28 172 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 PKHD1L1Q86WI1 4243 aa10.56□□□□□ -0.72
CLTA-203ENST00000396603 SLC7A5P1Q8MH63 180 aa10.55□□□□□ -0.72
CLTA-203ENST00000396603 TMEM18Q96B42 140 aa10.55□□□□□ -0.72
CLTA-203ENST00000396603 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
CLTA-203ENST00000396603 TSHBP01222 138 aa10.54□□□□□ -0.72
CLTA-203ENST00000396603 NPYP01303 97 aa10.54□□□□□ -0.72
CLTA-203ENST00000396603 ZNF25P17030 456 aaPredicted RBP10.54□□□□□ -0.72
CLTA-203ENST00000396603 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
CLTA-203ENST00000396603 SMIM2Q9BVW6 85 aa10.54□□□□□ -0.72
CLTA-203ENST00000396603 MAP1LC3AQ9H492 121 aa10.54□□□□□ -0.72
CLTA-203ENST00000396603 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
CLTA-203ENST00000396603 RAB5AP20339 215 aa10.52□□□□□ -0.73
CLTA-203ENST00000396603 RPL37AP61513 92 aaKnown RBP10.52□□□□□ -0.73
CLTA-203ENST00000396603 RNASEKQ6P5S7 137 aaKnown RBP10.52□□□□□ -0.73
CLTA-203ENST00000396603 PRSS1P07477 247 aa10.51□□□□□ -0.73
CLTA-203ENST00000396603 FGF6P10767 208 aa10.51□□□□□ -0.73
CLTA-203ENST00000396603 ESDP10768 282 aa10.51□□□□□ -0.73
CLTA-203ENST00000396603 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
CLTA-203ENST00000396603 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
CLTA-203ENST00000396603 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
CLTA-203ENST00000396603 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
CLTA-203ENST00000396603 KRTAP26-1Q6PEX3 210 aa10.5□□□□□ -0.73
CLTA-203ENST00000396603 LINC00269Q8N2A0 174 aa10.5□□□□□ -0.73
CLTA-203ENST00000396603 OR5A1Q8NGJ0 315 aa10.5□□□□□ -0.73
CLTA-203ENST00000396603 SMCO4Q9NRQ5 59 aa10.5□□□□□ -0.73
CLTA-203ENST00000396603 K7EMI3 77 aa10.49□□□□□ -0.73
CLTA-203ENST00000396603 CNBPP62633 177 aaKnown RBP10.49□□□□□ -0.73
CLTA-203ENST00000396603 MRPL52Q86TS9 123 aaKnown RBP10.49□□□□□ -0.73
CLTA-203ENST00000396603 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
CLTA-203ENST00000396603 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
CLTA-203ENST00000396603 NXT2Q9NPJ8 142 aaKnown RBP10.49□□□□□ -0.73
CLTA-203ENST00000396603 REG3AQ06141 175 aa10.48□□□□□ -0.73
CLTA-203ENST00000396603 FABP9Q0Z7S8 132 aa10.48□□□□□ -0.73
CLTA-203ENST00000396603 CIRBPQ14011 172 aaKnown RBP10.48□□□□□ -0.73
CLTA-203ENST00000396603 C20orf203Q8NBC4 194 aa10.48□□□□□ -0.73
CLTA-203ENST00000396603 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
CLTA-203ENST00000396603 TGIF2-C20orf24A0A0A6YYL0 155 aa10.47□□□□□ -0.73
CLTA-203ENST00000396603 LOC389332A0A1B0GUA5 103 aa10.47□□□□□ -0.73
CLTA-203ENST00000396603 G0S2P27469 103 aa10.47□□□□□ -0.73
CLTA-203ENST00000396603 SDIM1Q6ZPB5 146 aa10.47□□□□□ -0.73
CLTA-203ENST00000396603 Q8N8P6 123 aa10.47□□□□□ -0.73
CLTA-203ENST00000396603 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
CLTA-203ENST00000396603 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
CLTA-203ENST00000396603 CSDC2Q9Y534 153 aaKnown RBP10.47□□□□□ -0.73
CLTA-203ENST00000396603 ORMDL2Q53FV1 153 aa10.46□□□□□ -0.73
CLTA-203ENST00000396603 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.73
CLTA-203ENST00000396603 TIMM21Q9BVV7 248 aa10.46□□□□□ -0.73
CLTA-203ENST00000396603 TRAPPC1Q9Y5R8 145 aa10.46□□□□□ -0.73
CLTA-203ENST00000396603 KIAA1644Q3SXP7 199 aa10.45□□□□□ -0.74
CLTA-203ENST00000396603 Q6ZRU5 148 aa10.45□□□□□ -0.74
CLTA-203ENST00000396603 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
CLTA-203ENST00000396603 UBR4Q5T4S7 5183 aa10.44□□□□□ -0.74
CLTA-203ENST00000396603 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.44□□□□□ -0.74
CLTA-203ENST00000396603 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
CLTA-203ENST00000396603 PRSS3P2Q8NHM4 247 aa10.43□□□□□ -0.74
CLTA-203ENST00000396603 ALKBH7Q9BT30 221 aaPredicted RBP10.43□□□□□ -0.74
CLTA-203ENST00000396603 UBE2D4Q9Y2X8 147 aa10.43□□□□□ -0.74
CLTA-203ENST00000396603 CCL25O15444 150 aa10.42□□□□□ -0.74
CLTA-203ENST00000396603 IFI27P40305 119 aaPredicted RBP10.42□□□□□ -0.74
CLTA-203ENST00000396603 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
CLTA-203ENST00000396603 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
CLTA-203ENST00000396603 AP5S1Q9NUS5 200 aa10.42□□□□□ -0.74
CLTA-203ENST00000396603 IGHV3-64A0A075B6Q5 118 aa10.41□□□□□ -0.74
CLTA-203ENST00000396603 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
CLTA-203ENST00000396603 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
CLTA-203ENST00000396603 CBLN2Q8IUK8 224 aa10.41□□□□□ -0.74
CLTA-203ENST00000396603 CYSLTR1Q9Y271 337 aa10.41□□□□□ -0.74
CLTA-203ENST00000396603 IGKV3OR2-268A0A0C4DH90 116 aa10.4□□□□□ -0.74
CLTA-203ENST00000396603 hDV102S1A0JD36 115 aa10.4□□□□□ -0.74
CLTA-203ENST00000396603 SS18Q15532 418 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms