RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 Q8N9L7 120 aa10.49□□□□□ -0.73
COL4A3-202ENST00000396578 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
COL4A3-202ENST00000396578 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
COL4A3-202ENST00000396578 TRBV6-8A0A0A6YYG3 113 aa10.48□□□□□ -0.73
COL4A3-202ENST00000396578 A6NDX4 124 aa10.48□□□□□ -0.73
COL4A3-202ENST00000396578 FAM222AQ5U5X8 452 aa10.48□□□□□ -0.73
COL4A3-202ENST00000396578 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
COL4A3-202ENST00000396578 LRP4O75096 1905 aa10.48□□□□□ -0.73
COL4A3-202ENST00000396578 ADORA2A-AS1P86434 159 aa10.48□□□□□ -0.73
COL4A3-202ENST00000396578 TRBV27A0A0K0K1C4 114 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 CFAP126Q5VTH2 177 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 IGF2-ASQ6U949 168 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 NRGNQ92686 78 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 DHRS4-AS1Q9P1J3 65 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 COL5A1P20908 1838 aaPredicted RBP10.47□□□□□ -0.73
COL4A3-202ENST00000396578 DNAJC9-AS1A6NH13 148 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 M0QY20 66 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 CCDC179H3BU77 68 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 P0C879 139 aa10.47□□□□□ -0.73
COL4A3-202ENST00000396578 DAZAP2Q15038 168 aaPredicted RBP10.47□□□□□ -0.73
COL4A3-202ENST00000396578 MRPS36P82909 103 aaKnown RBP10.46□□□□□ -0.73
COL4A3-202ENST00000396578 XAGE1AQ9HD64 81 aa10.46□□□□□ -0.73
COL4A3-202ENST00000396578 ADAMTS20P59510 1910 aa10.46□□□□□ -0.74
COL4A3-202ENST00000396578 TP73-AS1Q9UF72 201 aa10.46□□□□□ -0.74
COL4A3-202ENST00000396578 LRRC75A-AS1Q8N1F1 130 aa10.45□□□□□ -0.74
COL4A3-202ENST00000396578 HILS1P60008 231 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 ZNF706Q9Y5V0 76 aaPredicted RBP10.44□□□□□ -0.74
COL4A3-202ENST00000396578 MUC6Q6W4X9 2439 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 LST1O00453 97 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 DEFB131BA0A096LNP1 70 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 FAM30AQ9NZY2 134 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 C7orf33Q8WU49 177 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 COX17Q14061 63 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 WFDC13Q8IUB5 93 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 RBX1P62877 108 aa10.44□□□□□ -0.74
COL4A3-202ENST00000396578 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
COL4A3-202ENST00000396578 K7EQG2 157 aa10.43□□□□□ -0.74
COL4A3-202ENST00000396578 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
COL4A3-202ENST00000396578 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
COL4A3-202ENST00000396578 SPINK6Q6UWN8 80 aa10.42□□□□□ -0.74
COL4A3-202ENST00000396578 SMIM11BQ8TCY0 68 aa10.42□□□□□ -0.74
COL4A3-202ENST00000396578 LINC00574Q9H8X3 128 aa10.42□□□□□ -0.74
COL4A3-202ENST00000396578 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
COL4A3-202ENST00000396578 PRR4Q16378 134 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 SMIM26A0A096LP01 95 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 TRBV6-4A0A1B0GX49 114 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 TNFRSF13BO14836 293 aaPredicted RBP10.41□□□□□ -0.74
COL4A3-202ENST00000396578 MIFP14174 115 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 SYCNQ0VAF6 134 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 CRIP1P50238 77 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 C2orf91Q6ZV80 131 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 DEFB114Q30KQ6 69 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 M0R378 163 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 IGF1P05019 195 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 MBD6Q96DN6 1003 aa10.41□□□□□ -0.74
COL4A3-202ENST00000396578 HRCT1Q6UXD1 115 aa10.4□□□□□ -0.74
COL4A3-202ENST00000396578 Q6ZQY7 126 aa10.4□□□□□ -0.74
COL4A3-202ENST00000396578 UBE2D1P51668 147 aa10.4□□□□□ -0.74
COL4A3-202ENST00000396578 LTBP2Q14767 1821 aa10.4□□□□□ -0.74
COL4A3-202ENST00000396578 PMAIP1Q13794 54 aa10.4□□□□□ -0.75
COL4A3-202ENST00000396578 C22orf34Q6ZV56 151 aa10.4□□□□□ -0.75
COL4A3-202ENST00000396578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.4□□□□□ -0.75
COL4A3-202ENST00000396578 LY6LH3BQJ8 138 aa10.39□□□□□ -0.75
COL4A3-202ENST00000396578 IGHV4-30-4P0DP06 118 aa10.39□□□□□ -0.75
COL4A3-202ENST00000396578 IGHV4-31P0DP07 118 aa10.39□□□□□ -0.75
COL4A3-202ENST00000396578 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.39□□□□□ -0.75
COL4A3-202ENST00000396578 CD164L2Q6UWJ8 174 aa10.39□□□□□ -0.75
COL4A3-202ENST00000396578 NRACQ8N912 160 aa10.39□□□□□ -0.75
COL4A3-202ENST00000396578 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
COL4A3-202ENST00000396578 UBE2D4Q9Y2X8 147 aa10.38□□□□□ -0.75
COL4A3-202ENST00000396578 TRAV7A0A075B6U4 112 aa10.38□□□□□ -0.75
COL4A3-202ENST00000396578 Q6JHZ5 121 aa10.38□□□□□ -0.75
COL4A3-202ENST00000396578 TSHBP01222 138 aa10.37□□□□□ -0.75
COL4A3-202ENST00000396578 FBXL19-AS1Q494R0 122 aa10.37□□□□□ -0.75
COL4A3-202ENST00000396578 XGP55808 180 aa10.37□□□□□ -0.75
COL4A3-202ENST00000396578 Q6Q795 121 aa10.37□□□□□ -0.75
COL4A3-202ENST00000396578 YPEL4Q96NS1 127 aa10.37□□□□□ -0.75
COL4A3-202ENST00000396578 UBE2D3P61077 147 aa10.36□□□□□ -0.75
COL4A3-202ENST00000396578 Q8N976 141 aa10.36□□□□□ -0.75
COL4A3-202ENST00000396578 PROK1P58294 105 aa10.36□□□□□ -0.75
COL4A3-202ENST00000396578 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
COL4A3-202ENST00000396578 PPDPFQ9H3Y8 114 aa10.36□□□□□ -0.75
COL4A3-202ENST00000396578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.36□□□□□ -0.75
COL4A3-202ENST00000396578 Q6YL49 198 aa10.36□□□□□ -0.75
COL4A3-202ENST00000396578 COL4A3Q01955 1670 aa10.36□□□□□ -0.75
COL4A3-202ENST00000396578 ACACBO00763 2458 aa10.35□□□□□ -0.75
COL4A3-202ENST00000396578 A8MZ25 164 aa10.35□□□□□ -0.75
COL4A3-202ENST00000396578 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
COL4A3-202ENST00000396578 ABCA2Q9BZC7 2435 aa10.35□□□□□ -0.75
COL4A3-202ENST00000396578 C10orf25Q5T742 122 aa10.35□□□□□ -0.75
COL4A3-202ENST00000396578 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
COL4A3-202ENST00000396578 EIF4EBP1Q13541 118 aaPredicted RBP10.34□□□□□ -0.75
COL4A3-202ENST00000396578 EBI3Q14213 229 aa10.34□□□□□ -0.75
COL4A3-202ENST00000396578 ZNF295-AS1Q8N0V1 137 aa10.34□□□□□ -0.75
COL4A3-202ENST00000396578 IGLV9-49A0A0B4J1Y8 123 aa10.34□□□□□ -0.75
COL4A3-202ENST00000396578 PLA2G5P39877 138 aa10.34□□□□□ -0.75
COL4A3-202ENST00000396578 MSMPQ1L6U9 139 aa10.33□□□□□ -0.76
COL4A3-202ENST00000396578 Q6ZVQ6 151 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms