RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-207ENST00000394801 CKS1BP61024 79 aa10.99□□□□□ -0.65
UBE2D3-207ENST00000394801 Q6ZTI0 123 aa10.99□□□□□ -0.65
UBE2D3-207ENST00000394801 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
UBE2D3-207ENST00000394801 SMCPP49901 116 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-207ENST00000394801 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
UBE2D3-207ENST00000394801 JMJD1CQ15652 2540 aa10.98□□□□□ -0.65
UBE2D3-207ENST00000394801 IGHV3-30-3P0DP02 117 aa10.98□□□□□ -0.65
UBE2D3-207ENST00000394801 UBE2D3P61077 147 aa10.98□□□□□ -0.65
UBE2D3-207ENST00000394801 UBE2D2P62837 147 aa10.98□□□□□ -0.65
UBE2D3-207ENST00000394801 CSNK1G2-AS1Q8NCQ2 148 aa10.98□□□□□ -0.65
UBE2D3-207ENST00000394801 PLAC8L1A1L4L8 177 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 Q6ZUT4 128 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 SMR3AQ99954 134 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 WFDC10AQ9H1F0 79 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 HIVEP2P31629 2446 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 K7EQD1 137 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 TSPAN13O95857 204 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 RNASE13Q5GAN3 156 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 NDUFA11Q86Y39 141 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 C16orf74Q96GX8 76 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 CDIP1Q9H305 208 aa10.97□□□□□ -0.65
UBE2D3-207ENST00000394801 IGHV1-58A0A0C4DH39 117 aa10.96□□□□□ -0.65
UBE2D3-207ENST00000394801 RPL36AP83881 106 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-207ENST00000394801 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.65
UBE2D3-207ENST00000394801 RPL36ALQ969Q0 106 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-207ENST00000394801 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-207ENST00000394801 IGHV3-64A0A075B6Q5 118 aa10.96□□□□□ -0.66
UBE2D3-207ENST00000394801 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.66
UBE2D3-207ENST00000394801 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.66
UBE2D3-207ENST00000394801 CFC1BP0CG36 223 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 CFC1P0CG37 223 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 PSMB2P49721 201 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 OVOL2Q9BRP0 275 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 TIRAPP58753 221 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 KRTAP10-3P60369 221 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 CSDC2Q9Y534 153 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-207ENST00000394801 A0A0J9YXY3 114 aa10.94□□□□□ -0.66
UBE2D3-207ENST00000394801 RPL35AP18077 110 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-207ENST00000394801 PPDPFLQ8WWR9 84 aa10.94□□□□□ -0.66
UBE2D3-207ENST00000394801 VSIG2Q96IQ7 327 aa10.94□□□□□ -0.66
UBE2D3-207ENST00000394801 TRBV20-1A0A075B6N2 111 aa10.94□□□□□ -0.66
UBE2D3-207ENST00000394801 IGLV5-45A0A087WSX0 123 aa10.94□□□□□ -0.66
UBE2D3-207ENST00000394801 TRAV8-3A0A0A6YYJ7 113 aa10.93□□□□□ -0.66
UBE2D3-207ENST00000394801 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
UBE2D3-207ENST00000394801 LY6G6DO95868 133 aa10.92□□□□□ -0.66
UBE2D3-207ENST00000394801 SPINK8P0C7L1 97 aa10.92□□□□□ -0.66
UBE2D3-207ENST00000394801 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
UBE2D3-207ENST00000394801 TEN1Q86WV5 123 aa10.92□□□□□ -0.66
UBE2D3-207ENST00000394801 SBSPONQ8IVN8 264 aa10.92□□□□□ -0.66
UBE2D3-207ENST00000394801 FAM19A3Q7Z5A8 133 aa10.92□□□□□ -0.66
UBE2D3-207ENST00000394801 NOTCH3Q9UM47 2321 aa10.92□□□□□ -0.66
UBE2D3-207ENST00000394801 LINC00482Q8N8I6 264 aa10.91□□□□□ -0.66
UBE2D3-207ENST00000394801 LITAFQ99732 161 aa10.91□□□□□ -0.66
UBE2D3-207ENST00000394801 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-207ENST00000394801 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
UBE2D3-207ENST00000394801 CARD19Q96LW7 228 aa10.91□□□□□ -0.66
UBE2D3-207ENST00000394801 A4D1N5 150 aa10.9□□□□□ -0.66
UBE2D3-207ENST00000394801 LINC00694P0DN24 101 aa10.9□□□□□ -0.66
UBE2D3-207ENST00000394801 MUSTN1Q8IVN3 82 aa10.9□□□□□ -0.66
UBE2D3-207ENST00000394801 PRO1854Q9UHT4 67 aa10.9□□□□□ -0.66
UBE2D3-207ENST00000394801 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
UBE2D3-207ENST00000394801 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
UBE2D3-207ENST00000394801 GAGE12JA6NER3 117 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 GAGE7O76087 117 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 TCL1BO95988 128 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 MT-ATP8P03928 68 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 GAGE12FP0CL80 117 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 GAGE12GP0CL81 117 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 GAGE12IP0CL82 117 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 GAGE4Q13068 117 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 GAGE5Q13069 117 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 ZFAND6Q6FIF0 208 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 TRGV2A0A075B6R0 118 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 SFTA2Q6UW10 78 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 OTOGQ6ZRI0 2925 aa10.89□□□□□ -0.67
UBE2D3-207ENST00000394801 A0A0B4J2C4 111 aa10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 PF4P02776 101 aa10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 XGP55808 180 aa10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 HERVK_113P63121 156 aa10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 LINC00242Q5T6M2 205 aa10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 EIF4EBP3O60516 100 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 SPANXDQ9BXN6 97 aa10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 SPANXCQ9NY87 97 aa10.88□□□□□ -0.67
UBE2D3-207ENST00000394801 COX6A2Q02221 97 aa10.87□□□□□ -0.67
UBE2D3-207ENST00000394801 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
UBE2D3-207ENST00000394801 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-207ENST00000394801 A8MZ25 164 aa10.87□□□□□ -0.67
UBE2D3-207ENST00000394801 SVIPQ8NHG7 77 aa10.87□□□□□ -0.67
UBE2D3-207ENST00000394801 TMEM101Q96IK0 257 aa10.87□□□□□ -0.67
UBE2D3-207ENST00000394801 IGLV5-39A0A0G2JS06 123 aa10.86□□□□□ -0.67
UBE2D3-207ENST00000394801 M0QXV9 152 aa10.86□□□□□ -0.67
UBE2D3-207ENST00000394801 TMEM262E9PQX1 116 aa10.85□□□□□ -0.67
UBE2D3-207ENST00000394801 H7C423 109 aa10.85□□□□□ -0.67
UBE2D3-207ENST00000394801 TIMM17BO60830 172 aa10.85□□□□□ -0.67
UBE2D3-207ENST00000394801 IGHV3-33P01772 117 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms