RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 E9PLD3 99 aa10.51□□□□□ -0.73
CCT4-201ENST00000394440 SIVA1O15304 175 aa10.51□□□□□ -0.73
CCT4-201ENST00000394440 MRPS36P82909 103 aaKnown RBP10.51□□□□□ -0.73
CCT4-201ENST00000394440 Q6ZUT4 128 aa10.51□□□□□ -0.73
CCT4-201ENST00000394440 CELA1Q9UNI1 258 aa10.51□□□□□ -0.73
CCT4-201ENST00000394440 CHAC1Q9BUX1 264 aa10.5□□□□□ -0.73
CCT4-201ENST00000394440 NBEAL1Q6ZS30 2694 aa10.5□□□□□ -0.73
CCT4-201ENST00000394440 HINT1P49773 126 aaPredicted RBP10.49□□□□□ -0.73
CCT4-201ENST00000394440 MPV17L2Q567V2 206 aa10.49□□□□□ -0.73
CCT4-201ENST00000394440 PRO0255Q9UI72 69 aa10.49□□□□□ -0.73
CCT4-201ENST00000394440 CSDC2Q9Y534 153 aaKnown RBP10.49□□□□□ -0.73
CCT4-201ENST00000394440 A0A0J9YXV3 536 aa10.48□□□□□ -0.73
CCT4-201ENST00000394440 BATFQ16520 125 aa10.48□□□□□ -0.73
CCT4-201ENST00000394440 RNASE13Q5GAN3 156 aaKnown RBP10.48□□□□□ -0.73
CCT4-201ENST00000394440 MAPKAPK5-AS1Q8N8E1 139 aa10.48□□□□□ -0.73
CCT4-201ENST00000394440 TRAV8-6A0A0B4J262 113 aa10.47□□□□□ -0.73
CCT4-201ENST00000394440 ZNF22P17026 224 aaPredicted RBP10.47□□□□□ -0.73
CCT4-201ENST00000394440 DAD1P61803 113 aa10.47□□□□□ -0.73
CCT4-201ENST00000394440 HIGD1BQ9P298 99 aa10.47□□□□□ -0.73
CCT4-201ENST00000394440 SPART-AS1P0CW21 52 aa10.47□□□□□ -0.73
CCT4-201ENST00000394440 TMEM97Q5BJF2 176 aa10.47□□□□□ -0.73
CCT4-201ENST00000394440 TMEM170BQ5T4T1 132 aa10.47□□□□□ -0.73
CCT4-201ENST00000394440 TMEM243Q9BU79 118 aa10.47□□□□□ -0.73
CCT4-201ENST00000394440 TRBV25-1A0A075B6N4 114 aa10.46□□□□□ -0.73
CCT4-201ENST00000394440 GYPEP15421 78 aa10.46□□□□□ -0.73
CCT4-201ENST00000394440 BVES-AS1Q5T3Y7 98 aa10.46□□□□□ -0.73
CCT4-201ENST00000394440 TRBV6-8A0A0A6YYG3 113 aa10.46□□□□□ -0.74
CCT4-201ENST00000394440 H7C423 109 aa10.46□□□□□ -0.74
CCT4-201ENST00000394440 HERVK_113P61574 105 aa10.46□□□□□ -0.74
CCT4-201ENST00000394440 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
CCT4-201ENST00000394440 VSIG2Q96IQ7 327 aa10.45□□□□□ -0.74
CCT4-201ENST00000394440 RETNQ9HD89 108 aa10.45□□□□□ -0.74
CCT4-201ENST00000394440 ATP5G1P05496 136 aa10.45□□□□□ -0.74
CCT4-201ENST00000394440 UBE2D1P51668 147 aa10.45□□□□□ -0.74
CCT4-201ENST00000394440 COL5A1-AS1Q5SY13 56 aa10.45□□□□□ -0.74
CCT4-201ENST00000394440 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
CCT4-201ENST00000394440 TINCRA0A1B0GVN0 87 aa10.44□□□□□ -0.74
CCT4-201ENST00000394440 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
CCT4-201ENST00000394440 ATP6V0E2Q8NHE4 81 aa10.44□□□□□ -0.74
CCT4-201ENST00000394440 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
CCT4-201ENST00000394440 MYMXA0A1B0GTQ4 84 aa10.43□□□□□ -0.74
CCT4-201ENST00000394440 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
CCT4-201ENST00000394440 PAX4O43316 350 aa10.43□□□□□ -0.74
CCT4-201ENST00000394440 HSD52Q0P140 79 aa10.43□□□□□ -0.74
CCT4-201ENST00000394440 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
CCT4-201ENST00000394440 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
CCT4-201ENST00000394440 UBE2L6O14933 153 aa10.42□□□□□ -0.74
CCT4-201ENST00000394440 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
CCT4-201ENST00000394440 OR5A1Q8NGJ0 315 aa10.42□□□□□ -0.74
CCT4-201ENST00000394440 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
CCT4-201ENST00000394440 IGLV5-45A0A087WSX0 123 aa10.41□□□□□ -0.74
CCT4-201ENST00000394440 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
CCT4-201ENST00000394440 TIRAPP58753 221 aa10.41□□□□□ -0.74
CCT4-201ENST00000394440 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
CCT4-201ENST00000394440 LEPROTO15243 131 aa10.4□□□□□ -0.74
CCT4-201ENST00000394440 RBX1P62877 108 aa10.4□□□□□ -0.74
CCT4-201ENST00000394440 A0A0J9YY99 117 aa10.4□□□□□ -0.75
CCT4-201ENST00000394440 ZNF815PA8K554 130 aa10.4□□□□□ -0.75
CCT4-201ENST00000394440 J3QQQ9 107 aa10.4□□□□□ -0.75
CCT4-201ENST00000394440 C12orf74Q32Q52 190 aa10.4□□□□□ -0.75
CCT4-201ENST00000394440 TRAV26-1A0A087WT03 109 aa10.39□□□□□ -0.75
CCT4-201ENST00000394440 GAGE6Q13070 117 aa10.39□□□□□ -0.75
CCT4-201ENST00000394440 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
CCT4-201ENST00000394440 F5H768 121 aa10.39□□□□□ -0.75
CCT4-201ENST00000394440 TMEM101Q96IK0 257 aa10.39□□□□□ -0.75
CCT4-201ENST00000394440 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
CCT4-201ENST00000394440 CHCHD5Q9BSY4 110 aa10.38□□□□□ -0.75
CCT4-201ENST00000394440 TMEM238C9JI98 176 aa10.38□□□□□ -0.75
CCT4-201ENST00000394440 SEC11AP67812 179 aa10.38□□□□□ -0.75
CCT4-201ENST00000394440 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
CCT4-201ENST00000394440 TENM3Q9P273 2699 aa10.38□□□□□ -0.75
CCT4-201ENST00000394440 IGLV4-60A0A075B6I1 120 aa10.37□□□□□ -0.75
CCT4-201ENST00000394440 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
CCT4-201ENST00000394440 GEMIN7Q9H840 131 aaKnown RBP10.37□□□□□ -0.75
CCT4-201ENST00000394440 A0A096LPF7 62 aa10.37□□□□□ -0.75
CCT4-201ENST00000394440 HERVK_113P63121 156 aa10.37□□□□□ -0.75
CCT4-201ENST00000394440 COX6A2Q02221 97 aa10.37□□□□□ -0.75
CCT4-201ENST00000394440 TAL2Q16559 108 aa10.37□□□□□ -0.75
CCT4-201ENST00000394440 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
CCT4-201ENST00000394440 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
CCT4-201ENST00000394440 IGHV1-58A0A0C4DH39 117 aa10.36□□□□□ -0.75
CCT4-201ENST00000394440 K7EIL1 84 aa10.36□□□□□ -0.75
CCT4-201ENST00000394440 IGHV3-30-3P0DP02 117 aa10.36□□□□□ -0.75
CCT4-201ENST00000394440 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
CCT4-201ENST00000394440 PRB2P02812 416 aaPredicted RBP10.36□□□□□ -0.75
CCT4-201ENST00000394440 HTN3P15516 51 aa10.36□□□□□ -0.75
CCT4-201ENST00000394440 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
CCT4-201ENST00000394440 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
CCT4-201ENST00000394440 MGAM2Q2M2H8 2515 aa10.35□□□□□ -0.75
CCT4-201ENST00000394440 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
CCT4-201ENST00000394440 MRPL23Q16540 153 aaKnown RBP10.35□□□□□ -0.75
CCT4-201ENST00000394440 A0A1B0GUV1 79 aa10.34□□□□□ -0.75
CCT4-201ENST00000394440 FXYD2P54710 66 aa10.34□□□□□ -0.75
CCT4-201ENST00000394440 CEND1Q8N111 149 aa10.34□□□□□ -0.75
CCT4-201ENST00000394440 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
CCT4-201ENST00000394440 SPINK8P0C7L1 97 aa10.34□□□□□ -0.75
CCT4-201ENST00000394440 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
CCT4-201ENST00000394440 H3BRM9 83 aa10.33□□□□□ -0.76
CCT4-201ENST00000394440 GCSHP23434 173 aa10.33□□□□□ -0.76
CCT4-201ENST00000394440 ICOSQ9Y6W8 199 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms