RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 FOXI1Q12951 378 aa11.93□□□□□ -0.5
PRDM5-202ENST00000394435 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.93□□□□□ -0.5
PRDM5-202ENST00000394435 GTSF1LQ9H1H1 148 aa11.93□□□□□ -0.5
PRDM5-202ENST00000394435 FLNAP21333 2647 aaKnown RBP11.93□□□□□ -0.5
PRDM5-202ENST00000394435 NBPF19A0A087WUL8 3843 aa11.92□□□□□ -0.5
PRDM5-202ENST00000394435 K7EQD1 137 aa11.92□□□□□ -0.5
PRDM5-202ENST00000394435 NPC2P61916 151 aa11.92□□□□□ -0.5
PRDM5-202ENST00000394435 COX6A2Q02221 97 aa11.92□□□□□ -0.5
PRDM5-202ENST00000394435 NOP10Q9NPE3 64 aaKnown RBP11.92□□□□□ -0.5
PRDM5-202ENST00000394435 GIG44P09565 113 aaPredicted RBP11.92□□□□□ -0.5
PRDM5-202ENST00000394435 RPL36AP83881 106 aaKnown RBP11.92□□□□□ -0.5
PRDM5-202ENST00000394435 Q1RN00 199 aa11.92□□□□□ -0.5
PRDM5-202ENST00000394435 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
PRDM5-202ENST00000394435 RPL36ALQ969Q0 106 aaKnown RBP11.92□□□□□ -0.5
PRDM5-202ENST00000394435 CUBNO60494 3623 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 NF1P21359 2839 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 CCDC168Q8NDH2 2452 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 GAGE12JA6NER3 117 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 RPL35AP18077 110 aaKnown RBP11.91□□□□□ -0.5
PRDM5-202ENST00000394435 TIRAPP58753 221 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 GAGE4Q13068 117 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 GAGE5Q13069 117 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 ZFAND6Q6FIF0 208 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 NTM-AS1Q6ZSK4 140 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 SIGMAR1Q99720 223 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 SPANXDQ9BXN6 97 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 SPANXCQ9NY87 97 aa11.91□□□□□ -0.5
PRDM5-202ENST00000394435 TRAV4A0A0B4J268 109 aa11.9□□□□□ -0.5
PRDM5-202ENST00000394435 NDUFA7O95182 113 aa11.9□□□□□ -0.5
PRDM5-202ENST00000394435 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
PRDM5-202ENST00000394435 TMEM101Q96IK0 257 aa11.9□□□□□ -0.5
PRDM5-202ENST00000394435 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
PRDM5-202ENST00000394435 SPATA25Q9BR10 227 aa11.89□□□□□ -0.51
PRDM5-202ENST00000394435 IGLV5-45A0A087WSX0 123 aa11.89□□□□□ -0.51
PRDM5-202ENST00000394435 MIAQ16674 131 aa11.89□□□□□ -0.51
PRDM5-202ENST00000394435 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
PRDM5-202ENST00000394435 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
PRDM5-202ENST00000394435 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
PRDM5-202ENST00000394435 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
PRDM5-202ENST00000394435 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
PRDM5-202ENST00000394435 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
PRDM5-202ENST00000394435 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
PRDM5-202ENST00000394435 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
PRDM5-202ENST00000394435 CMC4P56277 68 aaPredicted RBP11.87□□□□□ -0.51
PRDM5-202ENST00000394435 TEN1Q86WV5 123 aa11.87□□□□□ -0.51
PRDM5-202ENST00000394435 GAGE7O76087 117 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 SMAGPQ0VAQ4 97 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 DAND5Q8N907 189 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 C19orf73Q9NVV2 129 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 TRAV13-1A0A0B4J241 112 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 C9JAW5 83 aa11.86□□□□□ -0.51
PRDM5-202ENST00000394435 NDUFA1O15239 70 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 SCGB1A1P11684 91 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 PLA2G2AP14555 144 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 HERVK_113P63121 156 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 TRIAP1O43715 76 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 PPDPFLQ8WWR9 84 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 C16orf74Q96GX8 76 aa11.85□□□□□ -0.51
PRDM5-202ENST00000394435 PDZD2O15018 2839 aa11.84□□□□□ -0.51
PRDM5-202ENST00000394435 TRGV2A0A075B6R0 118 aa11.84□□□□□ -0.51
PRDM5-202ENST00000394435 LOC100131303A0A0U1RQF7 123 aa11.84□□□□□ -0.51
PRDM5-202ENST00000394435 SLC25A20O43772 301 aa11.84□□□□□ -0.51
PRDM5-202ENST00000394435 TIMM17BO60830 172 aa11.84□□□□□ -0.51
PRDM5-202ENST00000394435 TRBV30A0A0K0K1B3 111 aa11.83□□□□□ -0.52
PRDM5-202ENST00000394435 ZNF625Q96I27 306 aaPredicted RBP11.83□□□□□ -0.52
PRDM5-202ENST00000394435 CSDC2Q9Y534 153 aaKnown RBP11.83□□□□□ -0.52
PRDM5-202ENST00000394435 ACANP16112 2415 aa11.83□□□□□ -0.52
PRDM5-202ENST00000394435 IGLV5-39A0A0G2JS06 123 aa11.83□□□□□ -0.52
PRDM5-202ENST00000394435 Q9H8V8 135 aa11.83□□□□□ -0.52
PRDM5-202ENST00000394435 CDC42SE2Q9NRR3 84 aa11.83□□□□□ -0.52
PRDM5-202ENST00000394435 SETD2Q9BYW2 2564 aaPredicted RBP11.83□□□□□ -0.52
PRDM5-202ENST00000394435 ANK3Q12955 4377 aaKnown RBP11.82□□□□□ -0.52
PRDM5-202ENST00000394435 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
PRDM5-202ENST00000394435 CSNK1G2-AS1Q8NCQ2 148 aa11.82□□□□□ -0.52
PRDM5-202ENST00000394435 SETXQ7Z333 2677 aaKnown RBP11.82□□□□□ -0.52
PRDM5-202ENST00000394435 SMIM1B2RUZ4 78 aa11.82□□□□□ -0.52
PRDM5-202ENST00000394435 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
PRDM5-202ENST00000394435 ICOSQ9Y6W8 199 aa11.82□□□□□ -0.52
PRDM5-202ENST00000394435 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
PRDM5-202ENST00000394435 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
PRDM5-202ENST00000394435 UBE2L6O14933 153 aa11.81□□□□□ -0.52
PRDM5-202ENST00000394435 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
PRDM5-202ENST00000394435 FAM110AQ9BQ89 295 aa11.81□□□□□ -0.52
PRDM5-202ENST00000394435 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
PRDM5-202ENST00000394435 CDIP1Q9H305 208 aa11.81□□□□□ -0.52
PRDM5-202ENST00000394435 IFITM1P13164 125 aa11.8□□□□□ -0.52
PRDM5-202ENST00000394435 CIRBPQ14011 172 aaKnown RBP11.8□□□□□ -0.52
PRDM5-202ENST00000394435 OVOL2Q9BRP0 275 aa11.8□□□□□ -0.52
PRDM5-202ENST00000394435 JMJD1CQ15652 2540 aa11.8□□□□□ -0.52
PRDM5-202ENST00000394435 NIPBLQ6KC79 2804 aaeCLIP11.79□□□□□ -0.52
PRDM5-202ENST00000394435 TRGV4A0A0C4DH28 118 aa11.79□□□□□ -0.52
PRDM5-202ENST00000394435 HILS1P60008 231 aa11.79□□□□□ -0.52
PRDM5-202ENST00000394435 RPL13AP40429 203 aaKnown RBP11.78□□□□□ -0.52
PRDM5-202ENST00000394435 RNF183Q96D59 192 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms