RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CSDC2Q9Y534 153 aaKnown RBP16.59■□□□□ 0.25
LRFN4-202ENST00000393952 IGLV4-60A0A075B6I1 120 aa16.58■□□□□ 0.24
LRFN4-202ENST00000393952 ZNF25P17030 456 aaPredicted RBP16.58■□□□□ 0.24
LRFN4-202ENST00000393952 RNASE13Q5GAN3 156 aaKnown RBP16.58■□□□□ 0.24
LRFN4-202ENST00000393952 ZC2HC1BQ5TFG8 222 aa16.58■□□□□ 0.24
LRFN4-202ENST00000393952 BAALCQ8WXS3 180 aa16.58■□□□□ 0.24
LRFN4-202ENST00000393952 TMEM101Q96IK0 257 aa16.58■□□□□ 0.24
LRFN4-202ENST00000393952 H0Y8G0 127 aa16.57■□□□□ 0.24
LRFN4-202ENST00000393952 A0A087WX48 190 aa16.56■□□□□ 0.24
LRFN4-202ENST00000393952 PRSS1P07477 247 aa16.56■□□□□ 0.24
LRFN4-202ENST00000393952 MRPS36P82909 103 aaKnown RBP16.56■□□□□ 0.24
LRFN4-202ENST00000393952 A0A1B0GUV1 79 aa16.55■□□□□ 0.24
LRFN4-202ENST00000393952 SYS1-DBNDD2H3BUS1 97 aa16.55■□□□□ 0.24
LRFN4-202ENST00000393952 NPSP0C0P6 89 aa16.55■□□□□ 0.24
LRFN4-202ENST00000393952 PKIAP61925 76 aa16.55■□□□□ 0.24
LRFN4-202ENST00000393952 CDC42SE2Q9NRR3 84 aa16.55■□□□□ 0.24
LRFN4-202ENST00000393952 AKR1D1P51857 326 aa16.55■□□□□ 0.24
LRFN4-202ENST00000393952 SPATA12Q7Z6I5 190 aa16.55■□□□□ 0.24
LRFN4-202ENST00000393952 IGHV3-30P01768 117 aa16.54■□□□□ 0.24
LRFN4-202ENST00000393952 IGHV3-33P01772 117 aa16.54■□□□□ 0.24
LRFN4-202ENST00000393952 IGHV3-30-3P0DP02 117 aa16.54■□□□□ 0.24
LRFN4-202ENST00000393952 IGHV3-30-5P0DP03 117 aa16.54■□□□□ 0.24
LRFN4-202ENST00000393952 ZNF664Q8N3J9 261 aa16.54■□□□□ 0.24
LRFN4-202ENST00000393952 VCX2Q9H322 139 aa16.54■□□□□ 0.24
LRFN4-202ENST00000393952 PAPPA-AS1Q5QFB9 102 aa16.53■□□□□ 0.24
LRFN4-202ENST00000393952 UBE2DNLQ8IWF7 75 aa16.52■□□□□ 0.24
LRFN4-202ENST00000393952 AMELXQ99217 191 aa16.52■□□□□ 0.24
LRFN4-202ENST00000393952 UPK3BQ9BT76 320 aa16.52■□□□□ 0.24
LRFN4-202ENST00000393952 PRSS29PA6NIE9 313 aa16.51■□□□□ 0.23
LRFN4-202ENST00000393952 PMVKQ15126 192 aa16.51■□□□□ 0.23
LRFN4-202ENST00000393952 TEX43Q6ZNM6 134 aa16.51■□□□□ 0.23
LRFN4-202ENST00000393952 CASC10Q5T4H9 136 aa16.51■□□□□ 0.23
LRFN4-202ENST00000393952 PET117Q6UWS5 81 aa16.51■□□□□ 0.23
LRFN4-202ENST00000393952 CST9LQ9H4G1 147 aa16.51■□□□□ 0.23
LRFN4-202ENST00000393952 LINC01556Q5JQF7 62 aa16.5■□□□□ 0.23
LRFN4-202ENST00000393952 TRAV12-1A0A0B4J245 112 aa16.49■□□□□ 0.23
LRFN4-202ENST00000393952 SIVA1O15304 175 aa16.49■□□□□ 0.23
LRFN4-202ENST00000393952 ANGP03950 147 aaKnown RBP16.49■□□□□ 0.23
LRFN4-202ENST00000393952 PMCHL2Q9BQD1 86 aa16.49■□□□□ 0.23
LRFN4-202ENST00000393952 C3orf84H3BNL1 204 aa16.48■□□□□ 0.23
LRFN4-202ENST00000393952 DNAH10OSP0CZ25 163 aa16.48■□□□□ 0.23
LRFN4-202ENST00000393952 ODF1Q14990 250 aa16.47■□□□□ 0.23
LRFN4-202ENST00000393952 LINC01545Q5VT33 79 aa16.47■□□□□ 0.23
LRFN4-202ENST00000393952 CLPSL2Q6UWE3 100 aa16.47■□□□□ 0.23
LRFN4-202ENST00000393952 LINC00269Q8N2A0 174 aa16.47■□□□□ 0.23
LRFN4-202ENST00000393952 C2orf88Q9BSF0 95 aa16.47■□□□□ 0.23
LRFN4-202ENST00000393952 KLK12Q9UKR0 248 aa16.47■□□□□ 0.23
LRFN4-202ENST00000393952 IGKV3OR2-268A0A0C4DH90 116 aa16.46■□□□□ 0.23
LRFN4-202ENST00000393952 LGALS9CQ6DKI2 356 aa16.46■□□□□ 0.23
LRFN4-202ENST00000393952 CHTOPQ9Y3Y2 248 aaKnown RBP16.46■□□□□ 0.23
LRFN4-202ENST00000393952 Q9H8V8 135 aa16.45■□□□□ 0.22
LRFN4-202ENST00000393952 MRPL35Q9NZE8 188 aaKnown RBP16.45■□□□□ 0.22
LRFN4-202ENST00000393952 VPS13DQ5THJ4 4388 aa16.44■□□□□ 0.22
LRFN4-202ENST00000393952 TRAV13-1A0A0B4J241 112 aa16.44■□□□□ 0.22
LRFN4-202ENST00000393952 SCGB1D1O95968 90 aa16.44■□□□□ 0.22
LRFN4-202ENST00000393952 LYSTQ99698 3801 aa16.44■□□□□ 0.22
LRFN4-202ENST00000393952 C20orf202A1L168 122 aa16.43■□□□□ 0.22
LRFN4-202ENST00000393952 UBE2D1P51668 147 aa16.43■□□□□ 0.22
LRFN4-202ENST00000393952 REG3AQ06141 175 aa16.43■□□□□ 0.22
LRFN4-202ENST00000393952 JOSD1Q15040 202 aaPredicted RBP16.43■□□□□ 0.22
LRFN4-202ENST00000393952 A0A0J9YXV3 536 aa16.42■□□□□ 0.22
LRFN4-202ENST00000393952 F8VRH5 84 aa16.42■□□□□ 0.22
LRFN4-202ENST00000393952 PYY3Q5JQD4 70 aa16.42■□□□□ 0.22
LRFN4-202ENST00000393952 IGLV4-69A0A075B6H9 119 aa16.41■□□□□ 0.22
LRFN4-202ENST00000393952 DNAH1Q9P2D7 4330 aa16.4■□□□□ 0.22
LRFN4-202ENST00000393952 PRR34Q9NV39 138 aa16.4■□□□□ 0.22
LRFN4-202ENST00000393952 LINC00959A0A1B0GUT2 108 aa16.39■□□□□ 0.21
LRFN4-202ENST00000393952 ENHOQ6UWT2 76 aa16.39■□□□□ 0.21
LRFN4-202ENST00000393952 UBE2WQ96B02 151 aa16.39■□□□□ 0.21
LRFN4-202ENST00000393952 DPM2O94777 84 aa16.38■□□□□ 0.21
LRFN4-202ENST00000393952 IGLC3P0DOY3 106 aa16.38■□□□□ 0.21
LRFN4-202ENST00000393952 ATOH7Q8N100 152 aa16.38■□□□□ 0.21
LRFN4-202ENST00000393952 C11orf86A6NJI1 115 aa16.37■□□□□ 0.21
LRFN4-202ENST00000393952 CRPP02741 224 aa16.37■□□□□ 0.21
LRFN4-202ENST00000393952 LINC00242Q5T6M2 205 aa16.37■□□□□ 0.21
LRFN4-202ENST00000393952 IGKCP01834 107 aa16.36■□□□□ 0.21
LRFN4-202ENST00000393952 CHAC1Q9BUX1 264 aa16.36■□□□□ 0.21
LRFN4-202ENST00000393952 PLNP26678 52 aa16.35■□□□□ 0.21
LRFN4-202ENST00000393952 NFE4Q86UQ8 179 aa16.35■□□□□ 0.21
LRFN4-202ENST00000393952 TINCRA0A1B0GVN0 87 aa16.34■□□□□ 0.21
LRFN4-202ENST00000393952 COX6A2Q02221 97 aa16.34■□□□□ 0.21
LRFN4-202ENST00000393952 SS18Q15532 418 aa16.34■□□□□ 0.21
LRFN4-202ENST00000393952 FAM19A3Q7Z5A8 133 aa16.34■□□□□ 0.21
LRFN4-202ENST00000393952 IGLV10-54A0A075B6I4 117 aa16.34■□□□□ 0.21
LRFN4-202ENST00000393952 CDPF1Q6NVV7 123 aa16.34■□□□□ 0.21
LRFN4-202ENST00000393952 C10orf126Q8N4M7 172 aa16.34■□□□□ 0.21
LRFN4-202ENST00000393952 TRAV9-2A0A087WT02 112 aa16.33■□□□□ 0.2
LRFN4-202ENST00000393952 IBA57-AS1B1ANH7 110 aa16.33■□□□□ 0.2
LRFN4-202ENST00000393952 CCL25O15444 150 aa16.33■□□□□ 0.2
LRFN4-202ENST00000393952 KRTAP1-5Q9BYS1 174 aa16.33■□□□□ 0.2
LRFN4-202ENST00000393952 GEMIN7Q9H840 131 aaKnown RBP16.33■□□□□ 0.2
LRFN4-202ENST00000393952 ALMS1Q8TCU4 4167 aa16.33■□□□□ 0.2
LRFN4-202ENST00000393952 XCL1P47992 114 aa16.31■□□□□ 0.2
LRFN4-202ENST00000393952 SEC11AP67812 179 aa16.31■□□□□ 0.2
LRFN4-202ENST00000393952 MIAQ16674 131 aa16.31■□□□□ 0.2
LRFN4-202ENST00000393952 CHCHD10Q8WYQ3 142 aaPredicted RBP16.31■□□□□ 0.2
LRFN4-202ENST00000393952 LY6G6CO95867 125 aa16.3■□□□□ 0.2
LRFN4-202ENST00000393952 ZNF22P17026 224 aaPredicted RBP16.3■□□□□ 0.2
LRFN4-202ENST00000393952 HERVK_113P63121 156 aa16.3■□□□□ 0.2
LRFN4-202ENST00000393952 LINC00476Q8WZB0 136 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms