RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 C10orf113Q5VZT2 155 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 PLB1Q6P1J6 1458 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 HRCT1Q6UXD1 115 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 TOMM20LQ6UXN7 152 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 TTC9CQ8N5M4 171 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 MNS1Q8NEH6 495 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 IFT140Q96RY7 1462 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 MGST2Q99735 147 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 BOLA2Q9H3K6 86 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 TULP4Q9NRJ4 1543 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 SPANXA1Q9NS26 97 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 PSENENQ9NZ42 101 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 TRAPPC2LQ9UL33 140 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 CUBNO60494 3623 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 CELSR3Q9NYQ7 3312 aa-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 PRRC2CQ9Y520 2896 aaKnown RBP-0.51□□□□□ -2.49
PCNPP3-201ENST00000393579 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 DNAH9Q9NYC9 4486 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SCN8AQ9UQD0 1980 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 NUP98P52948 1817 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 MAGI1Q96QZ7 1491 aaPredicted RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 NLRP1Q9C000 1473 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 PKD1P98161 4303 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 DSPP15924 2871 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 ZFYVE9O95405 1425 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 ARHGEF10O15013 1369 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 ROCK1Q13464 1354 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 A0A1W2PRE2 83 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 HCG22E2RYF7 251 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 DBIP07108 87 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SCTP09683 121 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 CTXN2P0C2S0 81 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SNCAP37840 140 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SEC11AP67812 179 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 HIST1H1AQ02539 215 aaPredicted RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 NMSQ5H8A3 153 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 C9orf153Q5TBE3 101 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SAMD13Q5VXD3 122 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 TRIQKQ629K1 86 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 C12orf73Q69YU5 71 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 MRPL54Q6P161 138 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 WFDC13Q8IUB5 93 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SMIM20Q8N5G0 67 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SKA2Q8WVK7 121 aaPredicted RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 COPS9Q8WXC6 57 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 LINC01600Q96MT4 127 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 MRPL34Q9BQ48 92 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 LLPHQ9BRT6 129 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 UQCR10Q9UDW1 63 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 LSM2Q9Y333 95 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 S4R3F8 94 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 GOLGA4Q13439 2230 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 MYH10P35580 1976 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 HELZP42694 1942 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 AFDNP55196 1824 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 KIAA1549LQ6ZVL6 1849 aa-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 SIPA1L3O60292 1781 aaPredicted RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 ANK3Q12955 4377 aaKnown RBP-0.52□□□□□ -2.49
PCNPP3-201ENST00000393579 USP54Q70EL1 1684 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 ARHGEF12Q9NZN5 1544 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 NKTRP30414 1462 aaKnown RBP-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 OVOS2A0A0G2JMS6 1433 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 PPIP5K1Q6PFW1 1433 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 EIF3AQ14152 1382 aaKnown RBP-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 ANKRD30AQ9BXX3 1397 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 NBPF19A0A087WUL8 3843 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 A0A087WVE0 104 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 SPTY2D1-AS1A0A0U1RR47 76 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 A0A1B0GWA3 101 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 TMEM238C9JI98 176 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 J3QR89 54 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 MT-ND4LP03901 98 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 SAA2P0DJI9 122 aaPredicted RBP-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 GUCA1AP43080 201 aaPredicted RBP-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 S100A7L2Q5SY68 101 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 TMEM244Q5VVB8 128 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 MIC13Q5XKP0 118 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 COX6B2Q6YFQ2 88 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 C5orf38Q86SI9 138 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 KCNRGQ8N5I3 272 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 PP6455Q8WZ26 134 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 ARL11Q969Q4 196 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 SNRNP25Q9BV90 132 aaKnown RBP-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 NXT2Q9NPJ8 142 aaKnown RBP-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 CCDC88AQ3V6T2 1871 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 KIF13AQ9H1H9 1805 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 ACACAQ13085 2346 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 ZNF142P52746 1687 aaPredicted RBP-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 WDR97A6NE52 1622 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 KIAA0556O60303 1618 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 DNHD1Q96M86 4753 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 RNF213Q63HN8 5207 aa-0.53□□□□□ -2.49
PCNPP3-201ENST00000393579 HMGXB3Q12766 1538 aa-0.54□□□□□ -2.5
PCNPP3-201ENST00000393579 DNAH11Q96DT5 4516 aa-0.54□□□□□ -2.5
PCNPP3-201ENST00000393579 ERCC6Q03468 1493 aa-0.54□□□□□ -2.5
PCNPP3-201ENST00000393579 ZNF518AQ6AHZ1 1483 aa-0.54□□□□□ -2.5
PCNPP3-201ENST00000393579 ATG2AQ2TAZ0 1938 aa-0.54□□□□□ -2.5
PCNPP3-201ENST00000393579 DISP2A7MBM2 1401 aa-0.54□□□□□ -2.5
PCNPP3-201ENST00000393579 AKAP13Q12802 2813 aa-0.54□□□□□ -2.5
PCNPP3-201ENST00000393579 TRPM7Q96QT4 1865 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms