RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 LST1O00453 97 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 TRGV3P03979 118 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 MUSTN1Q8IVN3 82 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 SLC50A1Q9BRV3 221 aa8.41□□□□□ -1.06
TRAF3IP2-208ENST00000392556 IGKV2-40A0A087WW87 121 aaPredicted RBP8.4□□□□□ -1.06
TRAF3IP2-208ENST00000392556 TRAV41A0A0B4J266 112 aa8.4□□□□□ -1.06
TRAF3IP2-208ENST00000392556 H7C2G1 150 aa8.4□□□□□ -1.06
TRAF3IP2-208ENST00000392556 IGKV2D-40P01614 121 aaPredicted RBP8.4□□□□□ -1.06
TRAF3IP2-208ENST00000392556 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
TRAF3IP2-208ENST00000392556 PEMTQ9UBM1 199 aa8.4□□□□□ -1.06
TRAF3IP2-208ENST00000392556 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
TRAF3IP2-208ENST00000392556 A0A0J9YX75 114 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 J3QQQ9 107 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 IGKV1-17P01599 117 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 C14orf178Q8N769 122 aaPredicted RBP8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 UPK3BQ9BT76 320 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 SMAD5-AS1Q9Y6J3 95 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 I3L2K1 104 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 DEFB136Q30KP8 78 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 DCANP1Q8TF63 244 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 FAM19A4Q96LR4 140 aa8.39□□□□□ -1.07
TRAF3IP2-208ENST00000392556 IGHV7-81A0A0B4J1V7 117 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TRAV26-2A0A0B4J265 109 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 RPL27AP46776 148 aaKnown RBP8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 KLK15Q9H2R5 256 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TNCP24821 2201 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 IGHV3-21A0A0B4J1V1 117 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TRAV13-1A0A0B4J241 112 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 LEPROTO15243 131 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 ATP6V0E1O15342 81 aa8.38□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TINCRA0A1B0GVN0 87 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 SDHAF1A6NFY7 115 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 RNF125Q96EQ8 232 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 RPL18AQ02543 176 aaKnown RBP8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 C19orf54Q5BKX5 351 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 SERP2Q8N6R1 65 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 LINC00477Q96M19 166 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 CYSTM1Q9H1C7 97 aa8.37□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TRBV7-1A0A0A6YYK4 115 aa8.36□□□□□ -1.07
TRAF3IP2-208ENST00000392556 IGHV7-4-1A0A0J9YVY3 117 aa8.36□□□□□ -1.07
TRAF3IP2-208ENST00000392556 H3BUA1 57 aa8.36□□□□□ -1.07
TRAF3IP2-208ENST00000392556 M0R381 172 aa8.36□□□□□ -1.07
TRAF3IP2-208ENST00000392556 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
TRAF3IP2-208ENST00000392556 Q8TAT8 98 aa8.36□□□□□ -1.07
TRAF3IP2-208ENST00000392556 IGKV3D-20A0A0C4DH25 116 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 G3V318 75 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 DPH3P1Q9H4G8 78 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 IGIPA6NJ69 53 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TSHBP01222 138 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 DAND5Q8N907 189 aa8.35□□□□□ -1.07
TRAF3IP2-208ENST00000392556 TEX22C9J3V5 150 aa8.34□□□□□ -1.07
TRAF3IP2-208ENST00000392556 PPP1R17O96001 155 aa8.34□□□□□ -1.07
TRAF3IP2-208ENST00000392556 EPM2AB3EWF7 344 aa8.34□□□□□ -1.08
TRAF3IP2-208ENST00000392556 SEC61GP60059 68 aa8.34□□□□□ -1.08
TRAF3IP2-208ENST00000392556 TIMM17AQ99595 171 aa8.34□□□□□ -1.08
TRAF3IP2-208ENST00000392556 ECSCRQ19T08 205 aa8.33□□□□□ -1.08
TRAF3IP2-208ENST00000392556 ZNF876PQ49A33 203 aa8.33□□□□□ -1.08
TRAF3IP2-208ENST00000392556 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
TRAF3IP2-208ENST00000392556 DNAH9Q9NYC9 4486 aa8.33□□□□□ -1.08
TRAF3IP2-208ENST00000392556 A8MZ25 164 aa8.32□□□□□ -1.08
TRAF3IP2-208ENST00000392556 SPANXN1Q5VSR9 72 aa8.32□□□□□ -1.08
TRAF3IP2-208ENST00000392556 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
TRAF3IP2-208ENST00000392556 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
TRAF3IP2-208ENST00000392556 RS1O15537 224 aa8.32□□□□□ -1.08
TRAF3IP2-208ENST00000392556 PFN2P35080 140 aa8.32□□□□□ -1.08
TRAF3IP2-208ENST00000392556 CLEC2BQ92478 149 aa8.32□□□□□ -1.08
TRAF3IP2-208ENST00000392556 NDPQ00604 133 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 C11orf21Q9P2W6 132 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 IGHV4OR15-8A0A075B7B6 117 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 A0A087WW49 117 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 I3L3M4 83 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 K7EIM0 57 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 RHOHQ15669 191 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 C1orf43Q9BWL3 253 aa8.31□□□□□ -1.08
TRAF3IP2-208ENST00000392556 A0A0J9YXY3 114 aa8.3□□□□□ -1.08
TRAF3IP2-208ENST00000392556 SPRY2O43597 315 aa8.3□□□□□ -1.08
TRAF3IP2-208ENST00000392556 NDUFC2O95298 119 aa8.3□□□□□ -1.08
TRAF3IP2-208ENST00000392556 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
TRAF3IP2-208ENST00000392556 C9orf85Q96MD7 179 aa8.3□□□□□ -1.08
TRAF3IP2-208ENST00000392556 TENM3Q9P273 2699 aa8.3□□□□□ -1.08
TRAF3IP2-208ENST00000392556 SLURP1P55000 103 aa8.29□□□□□ -1.08
TRAF3IP2-208ENST00000392556 USMG5Q96IX5 58 aa8.29□□□□□ -1.08
TRAF3IP2-208ENST00000392556 LITAFQ99732 161 aa8.29□□□□□ -1.08
TRAF3IP2-208ENST00000392556 TRAV8-3A0A0A6YYJ7 113 aa8.29□□□□□ -1.08
TRAF3IP2-208ENST00000392556 IGLV1-51P01701 117 aa8.29□□□□□ -1.08
TRAF3IP2-208ENST00000392556 RPL35AP18077 110 aaKnown RBP8.28□□□□□ -1.08
TRAF3IP2-208ENST00000392556 CASC10Q5T4H9 136 aa8.28□□□□□ -1.08
TRAF3IP2-208ENST00000392556 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
TRAF3IP2-208ENST00000392556 TM2D3Q9BRN9 247 aa8.28□□□□□ -1.08
TRAF3IP2-208ENST00000392556 TP53TG1Q9Y2A0 90 aa8.28□□□□□ -1.08
TRAF3IP2-208ENST00000392556 BUB3O43684 328 aa8.28□□□□□ -1.08
TRAF3IP2-208ENST00000392556 V9GYY9 64 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms