RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 A0A0J9YX75 114 aa11.18□□□□□ -0.62
CCDC50-201ENST00000392455 PRR4Q16378 134 aa11.18□□□□□ -0.62
CCDC50-201ENST00000392455 TDRG1Q3Y452 100 aa11.18□□□□□ -0.62
CCDC50-201ENST00000392455 NRGNQ92686 78 aa11.18□□□□□ -0.62
CCDC50-201ENST00000392455 BDP1A6H8Y1 2624 aa11.18□□□□□ -0.62
CCDC50-201ENST00000392455 C11orf53Q8IXP5 236 aa11.17□□□□□ -0.62
CCDC50-201ENST00000392455 LINC00308Q8TCZ7 52 aa11.17□□□□□ -0.62
CCDC50-201ENST00000392455 MT-ATP8P03928 68 aa11.17□□□□□ -0.62
CCDC50-201ENST00000392455 IGLV3-1P01715 115 aa11.17□□□□□ -0.62
CCDC50-201ENST00000392455 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
CCDC50-201ENST00000392455 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
CCDC50-201ENST00000392455 LOC107984640A0A0U1RRK4 108 aa11.16□□□□□ -0.62
CCDC50-201ENST00000392455 LRCOL1A6NCL2 159 aa11.16□□□□□ -0.62
CCDC50-201ENST00000392455 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
CCDC50-201ENST00000392455 Q6JHZ5 121 aa11.15□□□□□ -0.62
CCDC50-201ENST00000392455 LIMD2Q9BT23 127 aa11.15□□□□□ -0.62
CCDC50-201ENST00000392455 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
CCDC50-201ENST00000392455 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
CCDC50-201ENST00000392455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
CCDC50-201ENST00000392455 C3orf84H3BNL1 204 aa11.15□□□□□ -0.62
CCDC50-201ENST00000392455 Q8N976 141 aa11.15□□□□□ -0.63
CCDC50-201ENST00000392455 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
CCDC50-201ENST00000392455 DEFB4AO15263 64 aa11.14□□□□□ -0.63
CCDC50-201ENST00000392455 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
CCDC50-201ENST00000392455 RPL28P46779 137 aaKnown RBP11.14□□□□□ -0.63
CCDC50-201ENST00000392455 SERTAD4-AS1Q5TG53 156 aa11.14□□□□□ -0.63
CCDC50-201ENST00000392455 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
CCDC50-201ENST00000392455 SNURFQ9Y675 71 aa11.14□□□□□ -0.63
CCDC50-201ENST00000392455 IGLV4-69A0A075B6H9 119 aa11.13□□□□□ -0.63
CCDC50-201ENST00000392455 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
CCDC50-201ENST00000392455 LY6LH3BQJ8 138 aa11.13□□□□□ -0.63
CCDC50-201ENST00000392455 F8WDY8 70 aa11.13□□□□□ -0.63
CCDC50-201ENST00000392455 CXCL6P80162 114 aa11.12□□□□□ -0.63
CCDC50-201ENST00000392455 CD164L2Q6UWJ8 174 aa11.12□□□□□ -0.63
CCDC50-201ENST00000392455 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
CCDC50-201ENST00000392455 TRBV6-4A0A1B0GX49 114 aa11.12□□□□□ -0.63
CCDC50-201ENST00000392455 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
CCDC50-201ENST00000392455 DEFB131BA0A096LNP1 70 aa11.12□□□□□ -0.63
CCDC50-201ENST00000392455 TRIAP1O43715 76 aa11.12□□□□□ -0.63
CCDC50-201ENST00000392455 IGF1P05019 195 aa11.11□□□□□ -0.63
CCDC50-201ENST00000392455 EIF4EBP1Q13541 118 aaPredicted RBP11.11□□□□□ -0.63
CCDC50-201ENST00000392455 COL5A1P20908 1838 aaPredicted RBP11.11□□□□□ -0.63
CCDC50-201ENST00000392455 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
CCDC50-201ENST00000392455 P0C879 139 aa11.11□□□□□ -0.63
CCDC50-201ENST00000392455 A0A0J9YWU9 116 aa11.1□□□□□ -0.63
CCDC50-201ENST00000392455 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
CCDC50-201ENST00000392455 hDV103S1A0JD37 113 aa11.1□□□□□ -0.63
CCDC50-201ENST00000392455 MAP6D1Q9H9H5 199 aa11.1□□□□□ -0.63
CCDC50-201ENST00000392455 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
CCDC50-201ENST00000392455 EBI3Q14213 229 aa11.09□□□□□ -0.63
CCDC50-201ENST00000392455 ADORA2A-AS1P86434 159 aa11.09□□□□□ -0.63
CCDC50-201ENST00000392455 LST1O00453 97 aa11.09□□□□□ -0.63
CCDC50-201ENST00000392455 CELA1Q9UNI1 258 aa11.09□□□□□ -0.63
CCDC50-201ENST00000392455 MSRB1Q9NZV6 116 aa11.09□□□□□ -0.63
CCDC50-201ENST00000392455 IGF2-ASQ6U949 168 aa11.09□□□□□ -0.63
CCDC50-201ENST00000392455 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
CCDC50-201ENST00000392455 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
CCDC50-201ENST00000392455 WFDC13Q8IUB5 93 aa11.08□□□□□ -0.64
CCDC50-201ENST00000392455 SCXQ7RTU7 201 aa11.07□□□□□ -0.64
CCDC50-201ENST00000392455 FAM30AQ9NZY2 134 aa11.07□□□□□ -0.64
CCDC50-201ENST00000392455 DAZAP2Q15038 168 aaPredicted RBP11.07□□□□□ -0.64
CCDC50-201ENST00000392455 LINC00467Q9BRT7 94 aa11.07□□□□□ -0.64
CCDC50-201ENST00000392455 FN1P02751 2386 aaKnown RBP11.06□□□□□ -0.64
CCDC50-201ENST00000392455 MRGPRG-AS1Q2M3A8 158 aa11.06□□□□□ -0.64
CCDC50-201ENST00000392455 ESRGQ1W209 222 aa11.06□□□□□ -0.64
CCDC50-201ENST00000392455 IGFL2Q6UWQ7 119 aa11.06□□□□□ -0.64
CCDC50-201ENST00000392455 LINC00173Q6ZV60 143 aa11.06□□□□□ -0.64
CCDC50-201ENST00000392455 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
CCDC50-201ENST00000392455 A0A096LNI7 61 aa11.06□□□□□ -0.64
CCDC50-201ENST00000392455 ZFP36P26651 326 aaKnown RBP11.05□□□□□ -0.64
CCDC50-201ENST00000392455 KRTAP27-1Q3LI81 207 aa11.05□□□□□ -0.64
CCDC50-201ENST00000392455 ZNF73O43830 326 aaPredicted RBP11.04□□□□□ -0.64
CCDC50-201ENST00000392455 TLN2Q9Y4G6 2542 aa11.04□□□□□ -0.64
CCDC50-201ENST00000392455 IGLV4-3A0A075B6K6 122 aa11.04□□□□□ -0.64
CCDC50-201ENST00000392455 FSHBP01225 129 aa11.04□□□□□ -0.64
CCDC50-201ENST00000392455 LELP1Q5T871 98 aa11.03□□□□□ -0.64
CCDC50-201ENST00000392455 DEFB1P60022 68 aa11.03□□□□□ -0.64
CCDC50-201ENST00000392455 PATE2Q6UY27 113 aa11.03□□□□□ -0.64
CCDC50-201ENST00000392455 CDKN2A-AS1Q9UH64 79 aa11.03□□□□□ -0.64
CCDC50-201ENST00000392455 TMEM254Q8TBM7 123 aa11.02□□□□□ -0.64
CCDC50-201ENST00000392455 SPAG11AQ6PDA7 123 aa11.02□□□□□ -0.65
CCDC50-201ENST00000392455 Q6ZQY7 126 aa11.02□□□□□ -0.65
CCDC50-201ENST00000392455 ZFHX2Q9C0A1 2572 aaPredicted RBP11.02□□□□□ -0.65
CCDC50-201ENST00000392455 Q8IZM0 81 aa11.01□□□□□ -0.65
CCDC50-201ENST00000392455 PLAC8L1A1L4L8 177 aa11.01□□□□□ -0.65
CCDC50-201ENST00000392455 SHISA2Q6UWI4 295 aa11.01□□□□□ -0.65
CCDC50-201ENST00000392455 ZNF22P17026 224 aaPredicted RBP11□□□□□ -0.65
CCDC50-201ENST00000392455 LINC00526Q96FQ7 95 aa11□□□□□ -0.65
CCDC50-201ENST00000392455 U3KQK5 164 aa11□□□□□ -0.65
CCDC50-201ENST00000392455 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
CCDC50-201ENST00000392455 IGHV4-31P0DP07 118 aa11□□□□□ -0.65
CCDC50-201ENST00000392455 ZNF843Q8N446 348 aa11□□□□□ -0.65
CCDC50-201ENST00000392455 Q8N7P7 452 aa11□□□□□ -0.65
CCDC50-201ENST00000392455 LINC00208Q96KT6 92 aa11□□□□□ -0.65
CCDC50-201ENST00000392455 DNAJC9-AS1A6NH13 148 aa10.99□□□□□ -0.65
CCDC50-201ENST00000392455 TP53AIP1Q9HCN2 124 aa10.99□□□□□ -0.65
CCDC50-201ENST00000392455 FSTL3O95633 263 aa10.99□□□□□ -0.65
CCDC50-201ENST00000392455 CHCHD7Q9BUK0 85 aa10.99□□□□□ -0.65
CCDC50-201ENST00000392455 A6NDX4 124 aa10.99□□□□□ -0.65
CCDC50-201ENST00000392455 TRBV7-7A0A0K0K1E9 115 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms