RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 KLK6Q92876 244 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 FAM167A-AS1Q96KT0 104 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 SLC50A1Q9BRV3 221 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 TIMM21Q9BVV7 248 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 TMEM167BQ9NRX6 74 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 ICOSQ9Y6W8 199 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 IGKV3D-11A0A0A0MRZ8 115 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 IGKV1-9A0A0C4DH69 117 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 TRBV7-4A0A0J9YYF1 115 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 LCE6AA0A183 80 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 CXorf51AA0A1B0GTR3 108 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 A0A1B0GWA3 101 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 LINC01549A6NIU2 74 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 HIGD1CA8MV81 97 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 TMEM256-PLSCR3K7ERE1 68 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 UBE2L6O14933 153 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 IGKV1-5P01602 117 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 IGLV3-27P01718 113 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 IGLV6-57P01721 117 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 IGHV3-30P01768 117 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 PIRTP0C851 137 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 IGHV3-30-5P0DP03 117 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 PCBD1P61457 104 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 RHOHQ15669 191 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 ZNF56Q15929 161 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 DEFB134Q4QY38 66 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 ATP11AUNQ6ZP68 121 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 TMEM263Q8WUH6 116 aaKnown RBP1.52□□□□□ -2.17
PTPRC-205ENST00000391970 AMELXQ99217 191 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 CCL13Q99616 98 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 PRO1854Q9UHT4 67 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 R4GMQ9 66 aa1.52□□□□□ -2.17
PTPRC-205ENST00000391970 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.51□□□□□ -2.17
PTPRC-205ENST00000391970 IGKV1D-43A0A0B4J1Z2 117 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 A0A0J9YY99 117 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 A0A1B0GW54 56 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 SDHAF1A6NFY7 115 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 A8MWP4 228 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 IQCF6A8MYZ5 107 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 E7EUB6 86 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 F8VRH5 84 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 IGHV3-53P01767 116 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 ARL14EPLP0DKL9 152 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 CGB3P0DN86 165 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 CGB7P0DN87 165 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 MGST1P10620 155 aaKnown RBP1.51□□□□□ -2.17
PTPRC-205ENST00000391970 MIFP14174 115 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 ZNF22P17026 224 aaPredicted RBP1.51□□□□□ -2.17
PTPRC-205ENST00000391970 FGF12P61328 243 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 PLGLAQ15195 96 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 SS18Q15532 418 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 MRPL51Q4U2R6 128 aaKnown RBP1.51□□□□□ -2.17
PTPRC-205ENST00000391970 BRD3OSQ6XYD6 125 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 ZNF826PQ6ZT77 177 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 ARHGAP5-AS1Q96IT6 56 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 C11orf68Q9H3H3 251 aaKnown RBP1.51□□□□□ -2.17
PTPRC-205ENST00000391970 C22orf24Q9Y442 160 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 ATG2BQ96BY7 2078 aa1.51□□□□□ -2.17
PTPRC-205ENST00000391970 IGHV1-45A0A0A0MS14 117 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 hDV103S1A0JD37 113 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 IGIPA6NJ69 53 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 C11orf86A6NJI1 115 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 C3orf84H3BNL1 204 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 M0R381 172 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 GNRH2O43555 120 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 SAA1P0DJI8 122 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-205ENST00000391970 FCER1GP30273 86 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 ZNF80P51504 273 aaPredicted RBP1.5□□□□□ -2.17
PTPRC-205ENST00000391970 S100A7L2Q5SY68 101 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 PATE2Q6UY27 113 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 FAM223AQ8IWN6 122 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 FAM216BQ8N7L0 139 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 DYNLRB2Q8TF09 96 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 CYP4F30PQ9H0H9 118 aa1.5□□□□□ -2.17
PTPRC-205ENST00000391970 ANKRD17O75179 2603 aaKnown RBP1.5□□□□□ -2.17
PTPRC-205ENST00000391970 TANC2Q9HCD6 1990 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 LOC107984156A0A0G2JMH3 177 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 A0A1B0GUT8 65 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 LOC101927531A0A1B0GV80 90 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 FAM223BA6NKX1 122 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 CPSF4LA6NMK7 179 aaKnown RBP1.49□□□□□ -2.17
PTPRC-205ENST00000391970 BUB1B-PAK6H3BSN5 160 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 CKS2P33552 79 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 LINC00313P59037 77 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 BLCAPP62952 87 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 LINC01554Q52M75 96 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 ZNF818PQ6ZRF7 136 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 ARL17AQ8IVW1 177 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 DEFB106AQ8N104 65 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 DYNAPQ8N1N2 210 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 PFN4Q8NHR9 129 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 PROK2Q9HC23 129 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 PSENENQ9NZ42 101 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 LINC00474Q9P2X8 69 aa1.49□□□□□ -2.17
PTPRC-205ENST00000391970 CACNA1DQ01668 2161 aa1.48□□□□□ -2.17
PTPRC-205ENST00000391970 PRR14LQ5THK1 2151 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms