RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 CSAG1Q6PB30 78 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 Q86TA4 180 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 Q8N9P0 234 aaPredicted RBP2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 CYYR1Q96J86 154 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 LINC00167Q96N53 147 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 PRR34Q9NV39 138 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 LHFPL6Q9Y693 200 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 KIF25-AS1Q9Y6Z4 181 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 TET1Q8NFU7 2136 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 PCDH15Q96QU1 1955 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 INTS1Q8N201 2190 aaKnown RBP2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 COL4A1P02462 1669 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 SCN7AQ01118 1682 aa2.12□□□□□ -2.07
TRAJ17-201ENST00000390520 COL27A1Q8IZC6 1860 aaPredicted RBP2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 ESPL1Q14674 2120 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 BCORQ6W2J9 1755 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 TCF20Q9UGU0 1960 aaKnown RBP2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 TRBV30A0A0K0K1B3 111 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 H7C423 109 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 DEFB116Q30KQ4 102 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 DMAC1Q96GE9 116 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 AMELXQ99217 191 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 KLK12Q9UKR0 248 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 SPAG17Q6Q759 2223 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 GCC2Q8IWJ2 1684 aa2.11□□□□□ -2.07
TRAJ17-201ENST00000390520 A0A0J9YY99 117 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 D6R8Y8 96 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 IFI6P09912 130 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 MUSTN1Q8IVN3 82 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 C9orf163Q8N9P6 203 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 TYMSOSQ8TAI1 123 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 UBALD1Q8TB05 177 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 TXNDC17Q9BRA2 123 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 DOT1LQ8TEK3 1739 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 DNAJC13O75165 2243 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 CR1P17927 2039 aa2.1□□□□□ -2.07
TRAJ17-201ENST00000390520 LRRC37A3O60309 1634 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 IGHV3-30P01768 117 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 IGHV3-30-5P0DP03 117 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 CNBPP62633 177 aaKnown RBP2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 ERHP84090 104 aaKnown RBP2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 PDE6HQ13956 83 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 Q9BRP9 147 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 PRR15LQ9BU68 103 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 ORMDL1Q9P0S3 153 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 SNURFQ9Y675 71 aa2.09□□□□□ -2.07
TRAJ17-201ENST00000390520 SAMD9LQ8IVG5 1584 aa2.09□□□□□ -2.08
TRAJ17-201ENST00000390520 ZNF831Q5JPB2 1677 aa2.09□□□□□ -2.08
TRAJ17-201ENST00000390520 ABCA4P78363 2273 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 DDX60LQ5H9U9 1706 aaKnown RBP2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 NRXN2Q9P2S2 1712 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 TNRC6BQ9UPQ9 1833 aaKnown RBP2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 SLIT1O75093 1534 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 ARFGEF3Q5TH69 2177 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 A0A087WVE0 104 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 TRBV6-6A0A0A6YYG2 114 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 A0A0J9YX75 114 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 TRBV6-5A0A0K0K1A5 114 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 NUPR2A6NF83 97 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 IGKV1-17P01599 117 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 KRTAP25-1Q3LHN0 102 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 HIGD2BQ4VC39 106 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 FAM74A4Q5TZK3 123 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 LYPD1Q8N2G4 141 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 ZNF563Q8TA94 476 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 PLAC8Q9NZF1 115 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 ZFHX2Q9C0A1 2572 aaPredicted RBP2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 ARHGAP32A7KAX9 2087 aa2.08□□□□□ -2.08
TRAJ17-201ENST00000390520 IGKV3-7A0A075B6H7 116 aa2.07□□□□□ -2.08
TRAJ17-201ENST00000390520 TRAV1-2A0A0B4J238 106 aa2.07□□□□□ -2.08
TRAJ17-201ENST00000390520 CISD3P0C7P0 127 aa2.07□□□□□ -2.08
TRAJ17-201ENST00000390520 SNRPGP62308 76 aaKnown RBP2.07□□□□□ -2.08
TRAJ17-201ENST00000390520 MRPL36Q9P0J6 103 aaKnown RBP2.07□□□□□ -2.08
TRAJ17-201ENST00000390520 RP1P56715 2156 aa2.07□□□□□ -2.08
TRAJ17-201ENST00000390520 CACNA1DQ01668 2161 aa2.07□□□□□ -2.08
TRAJ17-201ENST00000390520 PPP1R17O96001 155 aa2.06□□□□□ -2.08
TRAJ17-201ENST00000390520 CAV3P56539 151 aa2.06□□□□□ -2.08
TRAJ17-201ENST00000390520 SPAG11BQ08648 103 aa2.06□□□□□ -2.08
TRAJ17-201ENST00000390520 SPAG11AQ6PDA7 123 aa2.06□□□□□ -2.08
TRAJ17-201ENST00000390520 TTTY12Q9BZ98 90 aa2.06□□□□□ -2.08
TRAJ17-201ENST00000390520 E9PCH4 1651 aa2.06□□□□□ -2.08
TRAJ17-201ENST00000390520 COL4A5P29400 1685 aa2.06□□□□□ -2.08
TRAJ17-201ENST00000390520 IGKV3D-7A0A0C4DH55 119 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 LCE6AA0A183 80 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 SMIM27A0A1W2PRY6 76 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 WISP3O95389 354 aaPredicted RBP2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 PSORS1C2Q9UIG4 136 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 LINC01558Q9Y6Z2 57 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 NRAPQ86VF7 1730 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 DDX60Q8IY21 1712 aaKnown RBP2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 DLEC1Q9Y238 1755 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 UNC13CQ8NB66 2214 aa2.05□□□□□ -2.08
TRAJ17-201ENST00000390520 F8VRH5 84 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 DEPDC5O75140 1603 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 DNAL4O96015 105 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 CCL3L1P16619 93 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 SERF2P84101 59 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 MRGPRG-AS1Q2M3A8 158 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 KRTAP15-1Q3LI76 137 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 PATE1Q8WXA2 126 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms