RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 HMGN4O00479 90 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 DLEU1O43261 78 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 SNAPC5O75971 98 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 APOC2P02655 101 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 TMEM170BQ5T4T1 132 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 C12orf73Q69YU5 71 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 MRPL54Q6P161 138 aaKnown RBP-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 C5orf38Q86SI9 138 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 BAGE2Q86Y30 109 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 COPS9Q8WXC6 57 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 DPH3P1Q9H4G8 78 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 LINC01558Q9Y6Z2 57 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 MYCBP2O75592 4640 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 NHSL1Q5SYE7 1610 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 PXDNQ92626 1479 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 PKD1L1Q8TDX9 2849 aa-0.1□□□□□ -2.43
TRAJ41-201ENST00000390496 ABCA2Q9BZC7 2435 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 ARHGEF5Q12774 1597 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 ERCC6L2Q5T890 1561 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 RIMS1Q86UR5 1692 aaKnown RBP-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 ZNF609O15014 1411 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 CSPG4Q6UVK1 2322 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 LINC00587B1AMM8 73 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 CHKB-CPT1BH3BT56 60 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 I3L2K1 104 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 PRM1P04553 51 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 C9orf153Q5TBE3 101 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 Q6JHZ5 121 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 SFTA2Q6UW10 78 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 MGST2Q99735 147 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 DYNLRB1Q9NP97 96 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 LRRC37A2A6NM11 1700 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 ANKRD36A6QL64 1941 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 GOLGA4Q13439 2230 aaKnown RBP-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 TNXBP22105 4242 aa-0.11□□□□□ -2.43
TRAJ41-201ENST00000390496 SPTBN1Q01082 2364 aaKnown RBP-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 IFNGP01579 166 aa-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 WFDC2Q14508 124 aa-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 DEFB109BQ30KR1 87 aa-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 COMMD6Q7Z4G1 85 aa-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 SMIM4Q8WVI0 70 aa-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 TP53AIP1Q9HCN2 124 aa-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 A2ML1A8K2U0 1454 aa-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 URB1O60287 2271 aaKnown RBP-0.12□□□□□ -2.43
TRAJ41-201ENST00000390496 PAPPAQ13219 1627 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 PDCD11Q14690 1871 aaKnown RBP-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 SCN7AQ01118 1682 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 FAT2Q9NYQ8 4349 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 PIGBOS1A0A0B4J2F0 54 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 UQCR11O14957 56 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 SPRR1AP35321 89 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 Q8IZM0 81 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 C8orf59Q8N0T1 100 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 C1orf54Q8WWF1 131 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 C10orf71Q711Q0 1435 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 NSD3Q9BZ95 1437 aa-0.13□□□□□ -2.43
TRAJ41-201ENST00000390496 CHD6Q8TD26 2715 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 TENM4Q6N022 2769 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 BCL9LQ86UU0 1499 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 HSPG2P98160 4391 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 FXYD6-FXYD2A0A087WZ82 144 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 F6UZH7 168 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 CORTO00230 105 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 SSSCA1O60232 199 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 SFT2D2O95562 160 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 TNFP01375 233 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 IGLC1P0CG04 106 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 S100A1P23297 94 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 TPPP2P59282 170 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 CDC42SE2Q9NRR3 84 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 SPCS1Q9Y6A9 102 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 CACNA1AO00555 2505 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 BSNQ9UPA5 3926 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 NAIPQ13075 1403 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 MYOM1P52179 1685 aa-0.14□□□□□ -2.43
TRAJ41-201ENST00000390496 EFCAB10A6NFE3 127 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 GNG11P61952 73 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 Q5VSD8 79 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 MYOZ3Q8TDC0 251 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 LCN9Q8WX39 176 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 SPRR4Q96PI1 79 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 C2orf88Q9BSF0 95 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 NXT2Q9NPJ8 142 aaKnown RBP-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 ARL2-SNX15V9GYD0 113 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 HMGXB3Q12766 1538 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 COL4A6Q14031 1691 aa-0.15□□□□□ -2.43
TRAJ41-201ENST00000390496 ABCA3Q99758 1704 aa-0.16□□□□□ -2.43
TRAJ41-201ENST00000390496 MYOM2P54296 1465 aa-0.16□□□□□ -2.43
TRAJ41-201ENST00000390496 KTN1Q86UP2 1357 aaKnown RBP-0.16□□□□□ -2.43
TRAJ41-201ENST00000390496 TRBV6-1A0A0K0K1D8 114 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 UBE2L5PA0A1B0GUS4 154 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 SPRR1BP22528 89 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 PPP3R1P63098 170 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 UBE2L3P68036 154 aaKnown RBP-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 C10orf113Q5VZT2 155 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 FAM223AQ8IWN6 122 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 MANBALQ9NQG1 85 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 GNG8Q9UK08 70 aa-0.16□□□□□ -2.44
TRAJ41-201ENST00000390496 IER3IP1Q9Y5U9 82 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms